Experiment: 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04386 and MPMX20_04387 are separated by 165 nucleotides MPMX20_04387 and MPMX20_04388 are separated by 334 nucleotides
MPMX20_04386: MPMX20_04386 - Putative membrane-bound redox modulator Alx, at 4,576,453 to 4,577,481
_04386
MPMX20_04387: MPMX20_04387 - hypothetical protein, at 4,577,647 to 4,578,045
_04387
MPMX20_04388: MPMX20_04388 - Putative tartrate transporter, at 4,578,380 to 4,579,714
_04388
Position (kb)
4577
4578
4579 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4576.676 kb on - strand, within MPMX20_04386 at 4576.681 kb on - strand, within MPMX20_04386 at 4576.707 kb on + strand, within MPMX20_04386 at 4576.715 kb on - strand, within MPMX20_04386 at 4576.715 kb on - strand, within MPMX20_04386 at 4576.790 kb on - strand, within MPMX20_04386 at 4576.834 kb on - strand, within MPMX20_04386 at 4576.900 kb on - strand, within MPMX20_04386 at 4576.914 kb on + strand, within MPMX20_04386 at 4576.922 kb on - strand, within MPMX20_04386 at 4576.922 kb on - strand, within MPMX20_04386 at 4576.949 kb on + strand, within MPMX20_04386 at 4576.949 kb on + strand, within MPMX20_04386 at 4576.949 kb on + strand, within MPMX20_04386 at 4576.957 kb on - strand, within MPMX20_04386 at 4576.957 kb on - strand, within MPMX20_04386 at 4576.978 kb on - strand, within MPMX20_04386 at 4577.013 kb on + strand, within MPMX20_04386 at 4577.032 kb on + strand, within MPMX20_04386 at 4577.078 kb on - strand, within MPMX20_04386 at 4577.082 kb on + strand, within MPMX20_04386 at 4577.090 kb on - strand, within MPMX20_04386 at 4577.150 kb on + strand, within MPMX20_04386 at 4577.156 kb on - strand, within MPMX20_04386 at 4577.158 kb on - strand, within MPMX20_04386 at 4577.158 kb on - strand, within MPMX20_04386 at 4577.163 kb on - strand, within MPMX20_04386 at 4577.195 kb on - strand, within MPMX20_04386 at 4577.213 kb on + strand, within MPMX20_04386 at 4577.258 kb on - strand, within MPMX20_04386 at 4577.261 kb on + strand, within MPMX20_04386 at 4577.271 kb on + strand, within MPMX20_04386 at 4577.275 kb on + strand, within MPMX20_04386 at 4577.283 kb on - strand, within MPMX20_04386 at 4577.333 kb on + strand, within MPMX20_04386 at 4577.341 kb on - strand, within MPMX20_04386 at 4577.447 kb on - strand at 4577.461 kb on + strand at 4577.505 kb on + strand at 4577.513 kb on - strand at 4577.564 kb on + strand at 4577.572 kb on + strand at 4577.572 kb on - strand at 4577.573 kb on - strand at 4577.587 kb on + strand at 4577.606 kb on - strand at 4577.614 kb on + strand at 4577.614 kb on - strand at 4577.671 kb on - strand at 4577.702 kb on - strand, within MPMX20_04387 at 4577.705 kb on - strand, within MPMX20_04387 at 4577.755 kb on + strand, within MPMX20_04387 at 4577.755 kb on + strand, within MPMX20_04387 at 4577.819 kb on - strand, within MPMX20_04387 at 4577.840 kb on - strand, within MPMX20_04387 at 4577.866 kb on + strand, within MPMX20_04387 at 4577.923 kb on + strand, within MPMX20_04387 at 4577.940 kb on + strand, within MPMX20_04387 at 4577.948 kb on - strand, within MPMX20_04387 at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on + strand at 4578.006 kb on - strand at 4578.014 kb on - strand at 4578.014 kb on - strand at 4578.014 kb on - strand at 4578.014 kb on - strand at 4578.014 kb on - strand at 4578.014 kb on - strand at 4578.014 kb on - strand at 4578.014 kb on - strand at 4578.029 kb on + strand at 4578.034 kb on + strand at 4578.042 kb on + strand at 4578.051 kb on - strand at 4578.060 kb on - strand at 4578.118 kb on - strand at 4578.123 kb on - strand at 4578.123 kb on - strand at 4578.185 kb on - strand at 4578.218 kb on - strand at 4578.268 kb on + strand at 4578.376 kb on + strand at 4578.397 kb on - strand at 4578.402 kb on + strand at 4578.480 kb on + strand at 4578.492 kb on + strand at 4578.508 kb on + strand at 4578.542 kb on + strand, within MPMX20_04388 at 4578.551 kb on - strand, within MPMX20_04388 at 4578.551 kb on - strand, within MPMX20_04388 at 4578.660 kb on - strand, within MPMX20_04388 at 4578.689 kb on + strand, within MPMX20_04388 at 4578.689 kb on + strand, within MPMX20_04388 at 4578.697 kb on - strand, within MPMX20_04388 at 4578.706 kb on - strand, within MPMX20_04388 at 4578.718 kb on - strand, within MPMX20_04388 at 4578.727 kb on + strand, within MPMX20_04388 at 4578.753 kb on + strand, within MPMX20_04388 at 4578.753 kb on + strand, within MPMX20_04388 at 4578.756 kb on + strand, within MPMX20_04388 at 4578.761 kb on - strand, within MPMX20_04388 at 4578.761 kb on - strand, within MPMX20_04388 at 4578.790 kb on + strand, within MPMX20_04388 at 4578.827 kb on + strand, within MPMX20_04388 at 4578.891 kb on + strand, within MPMX20_04388 at 4579.013 kb on + strand, within MPMX20_04388 at 4579.021 kb on - strand, within MPMX20_04388 at 4579.021 kb on - strand, within MPMX20_04388 at 4579.027 kb on + strand, within MPMX20_04388 at 4579.027 kb on + strand, within MPMX20_04388
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,576,676 - MPMX20_04386 0.22 -0.3 4,576,681 - MPMX20_04386 0.22 -0.4 4,576,707 + MPMX20_04386 0.25 +0.3 4,576,715 - MPMX20_04386 0.25 +0.4 4,576,715 - MPMX20_04386 0.25 +0.8 4,576,790 - MPMX20_04386 0.33 -1.2 4,576,834 - MPMX20_04386 0.37 +1.4 4,576,900 - MPMX20_04386 0.43 -0.2 4,576,914 + MPMX20_04386 0.45 -0.2 4,576,922 - MPMX20_04386 0.46 -2.8 4,576,922 - MPMX20_04386 0.46 +0.2 4,576,949 + MPMX20_04386 0.48 +1.0 4,576,949 + MPMX20_04386 0.48 +0.6 4,576,949 + MPMX20_04386 0.48 -0.2 4,576,957 - MPMX20_04386 0.49 -0.7 4,576,957 - MPMX20_04386 0.49 +1.9 4,576,978 - MPMX20_04386 0.51 +0.3 4,577,013 + MPMX20_04386 0.54 +0.4 4,577,032 + MPMX20_04386 0.56 -1.4 4,577,078 - MPMX20_04386 0.61 +1.7 4,577,082 + MPMX20_04386 0.61 -0.5 4,577,090 - MPMX20_04386 0.62 -0.5 4,577,150 + MPMX20_04386 0.68 +0.0 4,577,156 - MPMX20_04386 0.68 -2.0 4,577,158 - MPMX20_04386 0.69 -0.5 4,577,158 - MPMX20_04386 0.69 -0.2 4,577,163 - MPMX20_04386 0.69 +1.4 4,577,195 - MPMX20_04386 0.72 -0.8 4,577,213 + MPMX20_04386 0.74 +0.3 4,577,258 - MPMX20_04386 0.78 -0.9 4,577,261 + MPMX20_04386 0.79 -0.9 4,577,271 + MPMX20_04386 0.79 +0.9 4,577,275 + MPMX20_04386 0.80 -1.5 4,577,283 - MPMX20_04386 0.81 +1.1 4,577,333 + MPMX20_04386 0.86 -0.7 4,577,341 - MPMX20_04386 0.86 -1.8 4,577,447 - -1.9 4,577,461 + +0.5 4,577,505 + +1.1 4,577,513 - -0.4 4,577,564 + +1.6 4,577,572 + -0.4 4,577,572 - -0.8 4,577,573 - -0.2 4,577,587 + -0.2 4,577,606 - +2.6 4,577,614 + +0.5 4,577,614 - +2.1 4,577,671 - +1.8 4,577,702 - MPMX20_04387 0.14 -1.6 4,577,705 - MPMX20_04387 0.15 -0.7 4,577,755 + MPMX20_04387 0.27 -0.2 4,577,755 + MPMX20_04387 0.27 -1.9 4,577,819 - MPMX20_04387 0.43 -1.6 4,577,840 - MPMX20_04387 0.48 -1.8 4,577,866 + MPMX20_04387 0.55 -0.8 4,577,923 + MPMX20_04387 0.69 -2.2 4,577,940 + MPMX20_04387 0.73 +0.7 4,577,948 - MPMX20_04387 0.75 +0.7 4,578,006 + +0.4 4,578,006 + +1.6 4,578,006 + -0.2 4,578,006 + -2.4 4,578,006 + -0.6 4,578,006 + +1.4 4,578,006 + -0.3 4,578,006 + -1.1 4,578,006 + -1.5 4,578,006 + -0.0 4,578,006 + -0.2 4,578,006 - -1.8 4,578,014 - -1.1 4,578,014 - +3.0 4,578,014 - +0.1 4,578,014 - +0.4 4,578,014 - -0.1 4,578,014 - +1.5 4,578,014 - -1.0 4,578,014 - -0.6 4,578,029 + +1.9 4,578,034 + +3.0 4,578,042 + -0.9 4,578,051 - -0.0 4,578,060 - -2.0 4,578,118 - +0.4 4,578,123 - +1.8 4,578,123 - -0.7 4,578,185 - -1.3 4,578,218 - +0.9 4,578,268 + +0.2 4,578,376 + +0.1 4,578,397 - +0.1 4,578,402 + +0.3 4,578,480 + +0.0 4,578,492 + +0.9 4,578,508 + +3.4 4,578,542 + MPMX20_04388 0.12 +1.7 4,578,551 - MPMX20_04388 0.13 -0.5 4,578,551 - MPMX20_04388 0.13 -1.2 4,578,660 - MPMX20_04388 0.21 -0.1 4,578,689 + MPMX20_04388 0.23 -1.2 4,578,689 + MPMX20_04388 0.23 -0.2 4,578,697 - MPMX20_04388 0.24 +0.1 4,578,706 - MPMX20_04388 0.24 -1.0 4,578,718 - MPMX20_04388 0.25 +0.1 4,578,727 + MPMX20_04388 0.26 -0.5 4,578,753 + MPMX20_04388 0.28 -3.5 4,578,753 + MPMX20_04388 0.28 +1.0 4,578,756 + MPMX20_04388 0.28 -0.2 4,578,761 - MPMX20_04388 0.29 -0.2 4,578,761 - MPMX20_04388 0.29 +0.4 4,578,790 + MPMX20_04388 0.31 +1.0 4,578,827 + MPMX20_04388 0.33 +1.0 4,578,891 + MPMX20_04388 0.38 +0.3 4,579,013 + MPMX20_04388 0.47 +0.1 4,579,021 - MPMX20_04388 0.48 +0.7 4,579,021 - MPMX20_04388 0.48 -0.2 4,579,027 + MPMX20_04388 0.48 +0.0 4,579,027 + MPMX20_04388 0.48 -0.7
Or see this region's nucleotide sequence