Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04387

Experiment: 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04386 and MPMX20_04387 are separated by 165 nucleotidesMPMX20_04387 and MPMX20_04388 are separated by 334 nucleotides MPMX20_04386: MPMX20_04386 - Putative membrane-bound redox modulator Alx, at 4,576,453 to 4,577,481 _04386 MPMX20_04387: MPMX20_04387 - hypothetical protein, at 4,577,647 to 4,578,045 _04387 MPMX20_04388: MPMX20_04388 - Putative tartrate transporter, at 4,578,380 to 4,579,714 _04388 Position (kb) 4577 4578 4579Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4576.676 kb on - strand, within MPMX20_04386at 4576.681 kb on - strand, within MPMX20_04386at 4576.707 kb on + strand, within MPMX20_04386at 4576.715 kb on - strand, within MPMX20_04386at 4576.715 kb on - strand, within MPMX20_04386at 4576.790 kb on - strand, within MPMX20_04386at 4576.834 kb on - strand, within MPMX20_04386at 4576.900 kb on - strand, within MPMX20_04386at 4576.914 kb on + strand, within MPMX20_04386at 4576.922 kb on - strand, within MPMX20_04386at 4576.922 kb on - strand, within MPMX20_04386at 4576.949 kb on + strand, within MPMX20_04386at 4576.949 kb on + strand, within MPMX20_04386at 4576.949 kb on + strand, within MPMX20_04386at 4576.957 kb on - strand, within MPMX20_04386at 4576.957 kb on - strand, within MPMX20_04386at 4576.978 kb on - strand, within MPMX20_04386at 4577.013 kb on + strand, within MPMX20_04386at 4577.032 kb on + strand, within MPMX20_04386at 4577.078 kb on - strand, within MPMX20_04386at 4577.082 kb on + strand, within MPMX20_04386at 4577.090 kb on - strand, within MPMX20_04386at 4577.150 kb on + strand, within MPMX20_04386at 4577.156 kb on - strand, within MPMX20_04386at 4577.158 kb on - strand, within MPMX20_04386at 4577.158 kb on - strand, within MPMX20_04386at 4577.163 kb on - strand, within MPMX20_04386at 4577.195 kb on - strand, within MPMX20_04386at 4577.213 kb on + strand, within MPMX20_04386at 4577.258 kb on - strand, within MPMX20_04386at 4577.261 kb on + strand, within MPMX20_04386at 4577.271 kb on + strand, within MPMX20_04386at 4577.275 kb on + strand, within MPMX20_04386at 4577.283 kb on - strand, within MPMX20_04386at 4577.333 kb on + strand, within MPMX20_04386at 4577.341 kb on - strand, within MPMX20_04386at 4577.447 kb on - strandat 4577.461 kb on + strandat 4577.505 kb on + strandat 4577.513 kb on - strandat 4577.564 kb on + strandat 4577.572 kb on + strandat 4577.572 kb on - strandat 4577.573 kb on - strandat 4577.587 kb on + strandat 4577.606 kb on - strandat 4577.614 kb on + strandat 4577.614 kb on - strandat 4577.671 kb on - strandat 4577.702 kb on - strand, within MPMX20_04387at 4577.705 kb on - strand, within MPMX20_04387at 4577.755 kb on + strand, within MPMX20_04387at 4577.755 kb on + strand, within MPMX20_04387at 4577.819 kb on - strand, within MPMX20_04387at 4577.840 kb on - strand, within MPMX20_04387at 4577.866 kb on + strand, within MPMX20_04387at 4577.923 kb on + strand, within MPMX20_04387at 4577.940 kb on + strand, within MPMX20_04387at 4577.948 kb on - strand, within MPMX20_04387at 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on + strandat 4578.006 kb on - strandat 4578.014 kb on - strandat 4578.014 kb on - strandat 4578.014 kb on - strandat 4578.014 kb on - strandat 4578.014 kb on - strandat 4578.014 kb on - strandat 4578.014 kb on - strandat 4578.014 kb on - strandat 4578.029 kb on + strandat 4578.034 kb on + strandat 4578.042 kb on + strandat 4578.051 kb on - strandat 4578.060 kb on - strandat 4578.118 kb on - strandat 4578.123 kb on - strandat 4578.123 kb on - strandat 4578.185 kb on - strandat 4578.218 kb on - strandat 4578.268 kb on + strandat 4578.376 kb on + strandat 4578.397 kb on - strandat 4578.402 kb on + strandat 4578.480 kb on + strandat 4578.492 kb on + strandat 4578.508 kb on + strandat 4578.542 kb on + strand, within MPMX20_04388at 4578.551 kb on - strand, within MPMX20_04388at 4578.551 kb on - strand, within MPMX20_04388at 4578.660 kb on - strand, within MPMX20_04388at 4578.689 kb on + strand, within MPMX20_04388at 4578.689 kb on + strand, within MPMX20_04388at 4578.697 kb on - strand, within MPMX20_04388at 4578.706 kb on - strand, within MPMX20_04388at 4578.718 kb on - strand, within MPMX20_04388at 4578.727 kb on + strand, within MPMX20_04388at 4578.753 kb on + strand, within MPMX20_04388at 4578.753 kb on + strand, within MPMX20_04388at 4578.756 kb on + strand, within MPMX20_04388at 4578.761 kb on - strand, within MPMX20_04388at 4578.761 kb on - strand, within MPMX20_04388at 4578.790 kb on + strand, within MPMX20_04388at 4578.827 kb on + strand, within MPMX20_04388at 4578.891 kb on + strand, within MPMX20_04388at 4579.013 kb on + strand, within MPMX20_04388at 4579.021 kb on - strand, within MPMX20_04388at 4579.021 kb on - strand, within MPMX20_04388at 4579.027 kb on + strand, within MPMX20_04388at 4579.027 kb on + strand, within MPMX20_04388

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,576,676 - MPMX20_04386 0.22 -0.3
4,576,681 - MPMX20_04386 0.22 -0.4
4,576,707 + MPMX20_04386 0.25 +0.3
4,576,715 - MPMX20_04386 0.25 +0.4
4,576,715 - MPMX20_04386 0.25 +0.8
4,576,790 - MPMX20_04386 0.33 -1.2
4,576,834 - MPMX20_04386 0.37 +1.4
4,576,900 - MPMX20_04386 0.43 -0.2
4,576,914 + MPMX20_04386 0.45 -0.2
4,576,922 - MPMX20_04386 0.46 -2.8
4,576,922 - MPMX20_04386 0.46 +0.2
4,576,949 + MPMX20_04386 0.48 +1.0
4,576,949 + MPMX20_04386 0.48 +0.6
4,576,949 + MPMX20_04386 0.48 -0.2
4,576,957 - MPMX20_04386 0.49 -0.7
4,576,957 - MPMX20_04386 0.49 +1.9
4,576,978 - MPMX20_04386 0.51 +0.3
4,577,013 + MPMX20_04386 0.54 +0.4
4,577,032 + MPMX20_04386 0.56 -1.4
4,577,078 - MPMX20_04386 0.61 +1.7
4,577,082 + MPMX20_04386 0.61 -0.5
4,577,090 - MPMX20_04386 0.62 -0.5
4,577,150 + MPMX20_04386 0.68 +0.0
4,577,156 - MPMX20_04386 0.68 -2.0
4,577,158 - MPMX20_04386 0.69 -0.5
4,577,158 - MPMX20_04386 0.69 -0.2
4,577,163 - MPMX20_04386 0.69 +1.4
4,577,195 - MPMX20_04386 0.72 -0.8
4,577,213 + MPMX20_04386 0.74 +0.3
4,577,258 - MPMX20_04386 0.78 -0.9
4,577,261 + MPMX20_04386 0.79 -0.9
4,577,271 + MPMX20_04386 0.79 +0.9
4,577,275 + MPMX20_04386 0.80 -1.5
4,577,283 - MPMX20_04386 0.81 +1.1
4,577,333 + MPMX20_04386 0.86 -0.7
4,577,341 - MPMX20_04386 0.86 -1.8
4,577,447 - -1.9
4,577,461 + +0.5
4,577,505 + +1.1
4,577,513 - -0.4
4,577,564 + +1.6
4,577,572 + -0.4
4,577,572 - -0.8
4,577,573 - -0.2
4,577,587 + -0.2
4,577,606 - +2.6
4,577,614 + +0.5
4,577,614 - +2.1
4,577,671 - +1.8
4,577,702 - MPMX20_04387 0.14 -1.6
4,577,705 - MPMX20_04387 0.15 -0.7
4,577,755 + MPMX20_04387 0.27 -0.2
4,577,755 + MPMX20_04387 0.27 -1.9
4,577,819 - MPMX20_04387 0.43 -1.6
4,577,840 - MPMX20_04387 0.48 -1.8
4,577,866 + MPMX20_04387 0.55 -0.8
4,577,923 + MPMX20_04387 0.69 -2.2
4,577,940 + MPMX20_04387 0.73 +0.7
4,577,948 - MPMX20_04387 0.75 +0.7
4,578,006 + +0.4
4,578,006 + +1.6
4,578,006 + -0.2
4,578,006 + -2.4
4,578,006 + -0.6
4,578,006 + +1.4
4,578,006 + -0.3
4,578,006 + -1.1
4,578,006 + -1.5
4,578,006 + -0.0
4,578,006 + -0.2
4,578,006 - -1.8
4,578,014 - -1.1
4,578,014 - +3.0
4,578,014 - +0.1
4,578,014 - +0.4
4,578,014 - -0.1
4,578,014 - +1.5
4,578,014 - -1.0
4,578,014 - -0.6
4,578,029 + +1.9
4,578,034 + +3.0
4,578,042 + -0.9
4,578,051 - -0.0
4,578,060 - -2.0
4,578,118 - +0.4
4,578,123 - +1.8
4,578,123 - -0.7
4,578,185 - -1.3
4,578,218 - +0.9
4,578,268 + +0.2
4,578,376 + +0.1
4,578,397 - +0.1
4,578,402 + +0.3
4,578,480 + +0.0
4,578,492 + +0.9
4,578,508 + +3.4
4,578,542 + MPMX20_04388 0.12 +1.7
4,578,551 - MPMX20_04388 0.13 -0.5
4,578,551 - MPMX20_04388 0.13 -1.2
4,578,660 - MPMX20_04388 0.21 -0.1
4,578,689 + MPMX20_04388 0.23 -1.2
4,578,689 + MPMX20_04388 0.23 -0.2
4,578,697 - MPMX20_04388 0.24 +0.1
4,578,706 - MPMX20_04388 0.24 -1.0
4,578,718 - MPMX20_04388 0.25 +0.1
4,578,727 + MPMX20_04388 0.26 -0.5
4,578,753 + MPMX20_04388 0.28 -3.5
4,578,753 + MPMX20_04388 0.28 +1.0
4,578,756 + MPMX20_04388 0.28 -0.2
4,578,761 - MPMX20_04388 0.29 -0.2
4,578,761 - MPMX20_04388 0.29 +0.4
4,578,790 + MPMX20_04388 0.31 +1.0
4,578,827 + MPMX20_04388 0.33 +1.0
4,578,891 + MPMX20_04388 0.38 +0.3
4,579,013 + MPMX20_04388 0.47 +0.1
4,579,021 - MPMX20_04388 0.48 +0.7
4,579,021 - MPMX20_04388 0.48 -0.2
4,579,027 + MPMX20_04388 0.48 +0.0
4,579,027 + MPMX20_04388 0.48 -0.7

Or see this region's nucleotide sequence