Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02172

Experiment: 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02170 and MPMX20_02171 are separated by 87 nucleotidesMPMX20_02171 and MPMX20_02172 are separated by 1 nucleotidesMPMX20_02172 and MPMX20_02173 are separated by 262 nucleotidesMPMX20_02173 and MPMX20_02174 overlap by 4 nucleotides MPMX20_02170: MPMX20_02170 - hypothetical protein, at 2,262,670 to 2,263,254 _02170 MPMX20_02171: MPMX20_02171 - hypothetical protein, at 2,263,342 to 2,264,112 _02171 MPMX20_02172: MPMX20_02172 - hypothetical protein, at 2,264,114 to 2,264,311 _02172 MPMX20_02173: MPMX20_02173 - hypothetical protein, at 2,264,574 to 2,265,008 _02173 MPMX20_02174: MPMX20_02174 - hypothetical protein, at 2,265,005 to 2,265,724 _02174 Position (kb) 2264 2265Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2263.118 kb on + strand, within MPMX20_02170at 2263.152 kb on + strand, within MPMX20_02170at 2263.179 kb on + strand, within MPMX20_02170at 2263.190 kb on + strand, within MPMX20_02170at 2263.190 kb on + strand, within MPMX20_02170at 2263.190 kb on + strand, within MPMX20_02170at 2263.190 kb on + strand, within MPMX20_02170at 2263.190 kb on + strand, within MPMX20_02170at 2263.190 kb on + strand, within MPMX20_02170at 2263.195 kb on + strand, within MPMX20_02170at 2263.198 kb on - strandat 2263.198 kb on - strandat 2263.198 kb on - strandat 2263.198 kb on - strandat 2263.198 kb on - strandat 2263.198 kb on - strandat 2263.200 kb on + strandat 2263.200 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.201 kb on + strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.208 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.209 kb on - strandat 2263.211 kb on - strandat 2263.219 kb on - strandat 2263.223 kb on - strandat 2263.223 kb on - strandat 2263.255 kb on + strandat 2263.256 kb on - strandat 2263.257 kb on - strandat 2263.259 kb on + strandat 2263.259 kb on + strandat 2263.259 kb on + strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.267 kb on - strandat 2263.271 kb on - strandat 2263.287 kb on - strandat 2263.287 kb on - strandat 2263.291 kb on + strandat 2263.291 kb on + strandat 2263.299 kb on - strandat 2263.299 kb on - strandat 2263.299 kb on - strandat 2263.299 kb on - strandat 2263.299 kb on - strandat 2263.299 kb on - strandat 2263.299 kb on - strandat 2263.305 kb on + strandat 2263.305 kb on + strandat 2263.305 kb on + strandat 2263.305 kb on + strandat 2263.305 kb on + strandat 2263.305 kb on + strandat 2263.305 kb on + strandat 2263.308 kb on - strandat 2263.308 kb on - strandat 2263.310 kb on + strandat 2263.312 kb on + strandat 2263.312 kb on + strandat 2263.312 kb on + strandat 2263.313 kb on - strandat 2263.313 kb on - strandat 2263.313 kb on - strandat 2263.313 kb on - strandat 2263.320 kb on - strandat 2263.332 kb on - strandat 2263.347 kb on - strandat 2263.380 kb on + strandat 2263.388 kb on - strandat 2263.422 kb on + strand, within MPMX20_02171at 2263.422 kb on + strand, within MPMX20_02171at 2263.428 kb on + strand, within MPMX20_02171at 2263.447 kb on - strand, within MPMX20_02171at 2263.476 kb on + strand, within MPMX20_02171at 2263.476 kb on + strand, within MPMX20_02171at 2263.476 kb on + strand, within MPMX20_02171at 2263.476 kb on + strand, within MPMX20_02171at 2263.476 kb on + strand, within MPMX20_02171at 2263.484 kb on - strand, within MPMX20_02171at 2263.484 kb on - strand, within MPMX20_02171at 2263.484 kb on - strand, within MPMX20_02171at 2263.560 kb on + strand, within MPMX20_02171at 2263.560 kb on + strand, within MPMX20_02171at 2263.560 kb on + strand, within MPMX20_02171at 2263.560 kb on + strand, within MPMX20_02171at 2263.560 kb on + strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.568 kb on - strand, within MPMX20_02171at 2263.618 kb on - strand, within MPMX20_02171at 2263.666 kb on + strand, within MPMX20_02171at 2263.673 kb on - strand, within MPMX20_02171at 2263.674 kb on + strand, within MPMX20_02171at 2263.679 kb on - strand, within MPMX20_02171at 2263.695 kb on + strand, within MPMX20_02171at 2263.695 kb on + strand, within MPMX20_02171at 2263.695 kb on + strand, within MPMX20_02171at 2263.703 kb on + strand, within MPMX20_02171at 2263.714 kb on + strand, within MPMX20_02171at 2263.729 kb on - strand, within MPMX20_02171at 2263.745 kb on + strand, within MPMX20_02171at 2263.755 kb on + strand, within MPMX20_02171at 2263.755 kb on + strand, within MPMX20_02171at 2263.755 kb on + strand, within MPMX20_02171at 2263.763 kb on - strand, within MPMX20_02171at 2263.763 kb on - strand, within MPMX20_02171at 2263.774 kb on + strand, within MPMX20_02171at 2263.802 kb on + strand, within MPMX20_02171at 2263.807 kb on + strand, within MPMX20_02171at 2263.807 kb on + strand, within MPMX20_02171at 2263.875 kb on + strand, within MPMX20_02171at 2263.882 kb on + strand, within MPMX20_02171at 2263.882 kb on + strand, within MPMX20_02171at 2263.882 kb on + strand, within MPMX20_02171at 2263.882 kb on + strand, within MPMX20_02171at 2263.882 kb on + strand, within MPMX20_02171at 2263.890 kb on - strand, within MPMX20_02171at 2263.890 kb on - strand, within MPMX20_02171at 2263.890 kb on - strand, within MPMX20_02171at 2263.890 kb on - strand, within MPMX20_02171at 2263.890 kb on - strand, within MPMX20_02171at 2263.890 kb on - strand, within MPMX20_02171at 2263.897 kb on + strand, within MPMX20_02171at 2263.897 kb on + strand, within MPMX20_02171at 2263.930 kb on + strand, within MPMX20_02171at 2263.930 kb on + strand, within MPMX20_02171at 2263.937 kb on + strand, within MPMX20_02171at 2263.938 kb on - strand, within MPMX20_02171at 2263.938 kb on - strand, within MPMX20_02171at 2263.942 kb on + strand, within MPMX20_02171at 2263.942 kb on + strand, within MPMX20_02171at 2263.942 kb on + strand, within MPMX20_02171at 2263.942 kb on + strand, within MPMX20_02171at 2263.950 kb on - strand, within MPMX20_02171at 2263.982 kb on + strand, within MPMX20_02171at 2263.984 kb on + strand, within MPMX20_02171at 2263.992 kb on - strand, within MPMX20_02171at 2264.052 kb on + strandat 2264.052 kb on + strandat 2264.060 kb on - strandat 2264.121 kb on - strandat 2264.131 kb on - strandat 2264.163 kb on + strand, within MPMX20_02172at 2264.174 kb on + strand, within MPMX20_02172at 2264.177 kb on - strand, within MPMX20_02172at 2264.177 kb on - strand, within MPMX20_02172at 2264.190 kb on + strand, within MPMX20_02172at 2264.195 kb on + strand, within MPMX20_02172at 2264.198 kb on - strand, within MPMX20_02172at 2264.259 kb on + strand, within MPMX20_02172at 2264.272 kb on + strand, within MPMX20_02172at 2264.272 kb on + strand, within MPMX20_02172at 2264.350 kb on - strandat 2264.380 kb on - strandat 2264.607 kb on + strandat 2264.607 kb on + strandat 2264.612 kb on + strandat 2264.612 kb on + strandat 2264.612 kb on + strandat 2264.612 kb on + strandat 2264.615 kb on - strandat 2264.620 kb on - strand, within MPMX20_02173at 2264.620 kb on - strand, within MPMX20_02173at 2264.630 kb on - strand, within MPMX20_02173at 2264.641 kb on + strand, within MPMX20_02173at 2264.651 kb on + strand, within MPMX20_02173at 2264.827 kb on + strand, within MPMX20_02173at 2264.827 kb on + strand, within MPMX20_02173at 2264.835 kb on - strand, within MPMX20_02173at 2264.840 kb on - strand, within MPMX20_02173at 2264.875 kb on - strand, within MPMX20_02173at 2264.882 kb on + strand, within MPMX20_02173at 2264.955 kb on - strand, within MPMX20_02173at 2264.966 kb on + strandat 2264.968 kb on + strandat 2264.976 kb on - strandat 2264.986 kb on - strandat 2264.995 kb on + strandat 2265.004 kb on + strandat 2265.014 kb on + strandat 2265.022 kb on - strandat 2265.040 kb on - strandat 2265.094 kb on - strand, within MPMX20_02174at 2265.094 kb on - strand, within MPMX20_02174at 2265.136 kb on - strand, within MPMX20_02174at 2265.229 kb on - strand, within MPMX20_02174at 2265.249 kb on + strand, within MPMX20_02174at 2265.249 kb on + strand, within MPMX20_02174at 2265.257 kb on - strand, within MPMX20_02174

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,263,118 + MPMX20_02170 0.77 +0.8
2,263,152 + MPMX20_02170 0.82 +0.8
2,263,179 + MPMX20_02170 0.87 -0.8
2,263,190 + MPMX20_02170 0.89 +0.5
2,263,190 + MPMX20_02170 0.89 -0.1
2,263,190 + MPMX20_02170 0.89 +0.4
2,263,190 + MPMX20_02170 0.89 +0.5
2,263,190 + MPMX20_02170 0.89 -0.5
2,263,190 + MPMX20_02170 0.89 -0.7
2,263,195 + MPMX20_02170 0.90 +0.3
2,263,198 - -0.5
2,263,198 - -0.3
2,263,198 - +2.3
2,263,198 - +0.3
2,263,198 - +0.1
2,263,198 - +0.7
2,263,200 + +0.9
2,263,200 + -1.6
2,263,201 + +0.7
2,263,201 + +1.9
2,263,201 + -0.2
2,263,201 + -0.1
2,263,201 + +0.0
2,263,201 + +1.1
2,263,201 + -0.8
2,263,201 + -0.3
2,263,201 + -1.2
2,263,201 + -1.4
2,263,201 + -0.7
2,263,201 + -0.7
2,263,201 + +0.4
2,263,201 + +0.4
2,263,201 + +1.4
2,263,201 + -0.5
2,263,201 + +0.3
2,263,201 + +0.1
2,263,201 + +0.4
2,263,201 + -0.1
2,263,201 + -0.9
2,263,201 + -0.7
2,263,208 - -0.9
2,263,208 - -0.2
2,263,208 - -1.5
2,263,208 - +0.7
2,263,208 - -0.7
2,263,208 - +0.3
2,263,208 - +1.3
2,263,208 - -1.0
2,263,208 - +1.3
2,263,208 - -0.8
2,263,208 - +3.2
2,263,208 - -0.1
2,263,208 - +0.2
2,263,208 - -0.1
2,263,208 - -1.2
2,263,208 - -1.5
2,263,209 - -0.3
2,263,209 - +0.3
2,263,209 - +1.0
2,263,209 - +2.3
2,263,209 - +0.3
2,263,209 - -2.8
2,263,209 - -2.0
2,263,209 - -0.7
2,263,209 - +1.7
2,263,209 - +0.2
2,263,209 - +1.1
2,263,209 - -0.4
2,263,211 - -0.6
2,263,219 - -0.3
2,263,223 - +0.5
2,263,223 - +0.1
2,263,255 + -1.7
2,263,256 - +0.3
2,263,257 - -0.3
2,263,259 + -3.0
2,263,259 + +1.3
2,263,259 + -1.0
2,263,267 - -0.1
2,263,267 - -1.4
2,263,267 - +0.4
2,263,267 - -0.3
2,263,267 - -1.6
2,263,267 - +0.7
2,263,267 - -1.5
2,263,267 - -0.5
2,263,267 - -1.3
2,263,267 - -1.9
2,263,267 - +0.3
2,263,267 - +1.7
2,263,267 - -4.1
2,263,267 - +1.2
2,263,271 - +1.9
2,263,287 - -2.1
2,263,287 - -1.0
2,263,291 + +1.0
2,263,291 + +0.1
2,263,299 - +0.7
2,263,299 - -0.9
2,263,299 - -0.5
2,263,299 - +1.9
2,263,299 - -0.0
2,263,299 - +0.5
2,263,299 - +0.7
2,263,305 + +1.4
2,263,305 + +0.3
2,263,305 + +0.3
2,263,305 + -0.7
2,263,305 + -0.5
2,263,305 + +0.3
2,263,305 + -1.4
2,263,308 - -0.8
2,263,308 - +2.4
2,263,310 + -1.2
2,263,312 + -0.1
2,263,312 + -2.1
2,263,312 + -0.3
2,263,313 - -1.1
2,263,313 - -0.5
2,263,313 - +0.3
2,263,313 - +0.0
2,263,320 - -0.4
2,263,332 - -0.0
2,263,347 - -0.5
2,263,380 + -0.3
2,263,388 - -0.2
2,263,422 + MPMX20_02171 0.10 +0.9
2,263,422 + MPMX20_02171 0.10 -2.8
2,263,428 + MPMX20_02171 0.11 +0.3
2,263,447 - MPMX20_02171 0.14 -0.2
2,263,476 + MPMX20_02171 0.17 +0.5
2,263,476 + MPMX20_02171 0.17 +1.3
2,263,476 + MPMX20_02171 0.17 +1.3
2,263,476 + MPMX20_02171 0.17 -2.2
2,263,476 + MPMX20_02171 0.17 -1.3
2,263,484 - MPMX20_02171 0.18 +0.8
2,263,484 - MPMX20_02171 0.18 +1.1
2,263,484 - MPMX20_02171 0.18 -0.3
2,263,560 + MPMX20_02171 0.28 +1.3
2,263,560 + MPMX20_02171 0.28 +1.9
2,263,560 + MPMX20_02171 0.28 +0.5
2,263,560 + MPMX20_02171 0.28 -0.3
2,263,560 + MPMX20_02171 0.28 +3.3
2,263,568 - MPMX20_02171 0.29 +0.7
2,263,568 - MPMX20_02171 0.29 +1.1
2,263,568 - MPMX20_02171 0.29 -2.2
2,263,568 - MPMX20_02171 0.29 +1.0
2,263,568 - MPMX20_02171 0.29 +0.6
2,263,568 - MPMX20_02171 0.29 +0.0
2,263,568 - MPMX20_02171 0.29 +0.7
2,263,568 - MPMX20_02171 0.29 +0.0
2,263,568 - MPMX20_02171 0.29 +0.3
2,263,568 - MPMX20_02171 0.29 -1.8
2,263,568 - MPMX20_02171 0.29 +0.2
2,263,568 - MPMX20_02171 0.29 +1.3
2,263,618 - MPMX20_02171 0.36 -1.3
2,263,666 + MPMX20_02171 0.42 +0.1
2,263,673 - MPMX20_02171 0.43 +2.0
2,263,674 + MPMX20_02171 0.43 +0.1
2,263,679 - MPMX20_02171 0.44 -0.6
2,263,695 + MPMX20_02171 0.46 +0.9
2,263,695 + MPMX20_02171 0.46 -1.2
2,263,695 + MPMX20_02171 0.46 -0.3
2,263,703 + MPMX20_02171 0.47 -0.7
2,263,714 + MPMX20_02171 0.48 -0.3
2,263,729 - MPMX20_02171 0.50 -0.3
2,263,745 + MPMX20_02171 0.52 -1.6
2,263,755 + MPMX20_02171 0.54 +0.8
2,263,755 + MPMX20_02171 0.54 +0.3
2,263,755 + MPMX20_02171 0.54 +1.0
2,263,763 - MPMX20_02171 0.55 +0.9
2,263,763 - MPMX20_02171 0.55 -2.6
2,263,774 + MPMX20_02171 0.56 -0.9
2,263,802 + MPMX20_02171 0.60 +0.3
2,263,807 + MPMX20_02171 0.60 +1.5
2,263,807 + MPMX20_02171 0.60 +2.0
2,263,875 + MPMX20_02171 0.69 +1.3
2,263,882 + MPMX20_02171 0.70 -0.0
2,263,882 + MPMX20_02171 0.70 -2.5
2,263,882 + MPMX20_02171 0.70 +1.2
2,263,882 + MPMX20_02171 0.70 -1.5
2,263,882 + MPMX20_02171 0.70 +0.8
2,263,890 - MPMX20_02171 0.71 +2.4
2,263,890 - MPMX20_02171 0.71 +0.3
2,263,890 - MPMX20_02171 0.71 -3.0
2,263,890 - MPMX20_02171 0.71 -2.3
2,263,890 - MPMX20_02171 0.71 -1.0
2,263,890 - MPMX20_02171 0.71 +0.4
2,263,897 + MPMX20_02171 0.72 -1.0
2,263,897 + MPMX20_02171 0.72 +0.3
2,263,930 + MPMX20_02171 0.76 -2.4
2,263,930 + MPMX20_02171 0.76 +1.0
2,263,937 + MPMX20_02171 0.77 +0.9
2,263,938 - MPMX20_02171 0.77 -1.8
2,263,938 - MPMX20_02171 0.77 -0.1
2,263,942 + MPMX20_02171 0.78 -1.6
2,263,942 + MPMX20_02171 0.78 +1.4
2,263,942 + MPMX20_02171 0.78 +0.5
2,263,942 + MPMX20_02171 0.78 -0.6
2,263,950 - MPMX20_02171 0.79 +1.4
2,263,982 + MPMX20_02171 0.83 +1.0
2,263,984 + MPMX20_02171 0.83 -0.8
2,263,992 - MPMX20_02171 0.84 +0.6
2,264,052 + -0.8
2,264,052 + +0.3
2,264,060 - +0.5
2,264,121 - +0.3
2,264,131 - +0.5
2,264,163 + MPMX20_02172 0.25 -0.7
2,264,174 + MPMX20_02172 0.30 -0.2
2,264,177 - MPMX20_02172 0.32 -3.7
2,264,177 - MPMX20_02172 0.32 -0.2
2,264,190 + MPMX20_02172 0.38 -0.7
2,264,195 + MPMX20_02172 0.41 -0.5
2,264,198 - MPMX20_02172 0.42 -1.9
2,264,259 + MPMX20_02172 0.73 -1.1
2,264,272 + MPMX20_02172 0.80 -1.6
2,264,272 + MPMX20_02172 0.80 -0.5
2,264,350 - -1.6
2,264,380 - +0.3
2,264,607 + -0.0
2,264,607 + -1.9
2,264,612 + -0.2
2,264,612 + +0.1
2,264,612 + +0.6
2,264,612 + -0.0
2,264,615 - +0.5
2,264,620 - MPMX20_02173 0.11 +0.5
2,264,620 - MPMX20_02173 0.11 +0.4
2,264,630 - MPMX20_02173 0.13 -0.7
2,264,641 + MPMX20_02173 0.15 +1.8
2,264,651 + MPMX20_02173 0.18 -2.7
2,264,827 + MPMX20_02173 0.58 -0.4
2,264,827 + MPMX20_02173 0.58 -0.3
2,264,835 - MPMX20_02173 0.60 -1.3
2,264,840 - MPMX20_02173 0.61 -2.0
2,264,875 - MPMX20_02173 0.69 -0.6
2,264,882 + MPMX20_02173 0.71 -0.7
2,264,955 - MPMX20_02173 0.88 +0.1
2,264,966 + -1.3
2,264,968 + +0.8
2,264,976 - -0.7
2,264,986 - -1.2
2,264,995 + +0.6
2,265,004 + -0.0
2,265,014 + +0.7
2,265,022 - -1.0
2,265,040 - -2.2
2,265,094 - MPMX20_02174 0.12 -0.5
2,265,094 - MPMX20_02174 0.12 +0.1
2,265,136 - MPMX20_02174 0.18 -1.0
2,265,229 - MPMX20_02174 0.31 +2.4
2,265,249 + MPMX20_02174 0.34 -1.1
2,265,249 + MPMX20_02174 0.34 +0.7
2,265,257 - MPMX20_02174 0.35 -0.3

Or see this region's nucleotide sequence