Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00455

Experiment: 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00454 and MPMX20_00455 are separated by 56 nucleotidesMPMX20_00455 and MPMX20_00456 are separated by 2 nucleotides MPMX20_00454: MPMX20_00454 - GTPase HflX, at 468,516 to 469,796 _00454 MPMX20_00455: MPMX20_00455 - Modulator of FtsH protease HflK, at 469,853 to 471,115 _00455 MPMX20_00456: MPMX20_00456 - Modulator of FtsH protease HflC, at 471,118 to 472,122 _00456 Position (kb) 469 470 471 472Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 468.878 kb on + strand, within MPMX20_00454at 468.878 kb on + strand, within MPMX20_00454at 468.905 kb on - strand, within MPMX20_00454at 468.907 kb on + strand, within MPMX20_00454at 468.939 kb on - strand, within MPMX20_00454at 468.992 kb on + strand, within MPMX20_00454at 469.024 kb on + strand, within MPMX20_00454at 469.032 kb on - strand, within MPMX20_00454at 469.032 kb on - strand, within MPMX20_00454at 469.065 kb on - strand, within MPMX20_00454at 469.091 kb on + strand, within MPMX20_00454at 469.105 kb on + strand, within MPMX20_00454at 469.125 kb on + strand, within MPMX20_00454at 469.133 kb on - strand, within MPMX20_00454at 469.161 kb on - strand, within MPMX20_00454at 469.172 kb on + strand, within MPMX20_00454at 469.186 kb on - strand, within MPMX20_00454at 469.191 kb on + strand, within MPMX20_00454at 469.199 kb on - strand, within MPMX20_00454at 469.199 kb on - strand, within MPMX20_00454at 469.236 kb on - strand, within MPMX20_00454at 469.270 kb on + strand, within MPMX20_00454at 469.275 kb on + strand, within MPMX20_00454at 469.312 kb on + strand, within MPMX20_00454at 469.321 kb on - strand, within MPMX20_00454at 469.364 kb on + strand, within MPMX20_00454at 469.517 kb on + strand, within MPMX20_00454at 469.638 kb on + strand, within MPMX20_00454at 469.670 kb on + strandat 469.693 kb on + strandat 469.702 kb on - strandat 469.702 kb on - strandat 469.719 kb on - strandat 469.747 kb on + strandat 469.768 kb on + strandat 469.790 kb on - strandat 470.050 kb on + strand, within MPMX20_00455at 470.079 kb on - strand, within MPMX20_00455at 470.093 kb on + strand, within MPMX20_00455at 470.130 kb on - strand, within MPMX20_00455at 470.140 kb on + strand, within MPMX20_00455at 470.203 kb on + strand, within MPMX20_00455at 470.312 kb on - strand, within MPMX20_00455at 470.312 kb on - strand, within MPMX20_00455at 470.388 kb on + strand, within MPMX20_00455at 470.428 kb on + strand, within MPMX20_00455at 470.501 kb on - strand, within MPMX20_00455at 470.563 kb on + strand, within MPMX20_00455at 470.571 kb on - strand, within MPMX20_00455at 470.571 kb on - strand, within MPMX20_00455at 470.590 kb on + strand, within MPMX20_00455at 470.665 kb on + strand, within MPMX20_00455at 470.668 kb on - strand, within MPMX20_00455at 470.675 kb on + strand, within MPMX20_00455at 470.694 kb on + strand, within MPMX20_00455at 470.702 kb on - strand, within MPMX20_00455at 470.735 kb on + strand, within MPMX20_00455at 470.753 kb on + strand, within MPMX20_00455at 470.758 kb on + strand, within MPMX20_00455at 470.758 kb on + strand, within MPMX20_00455at 470.758 kb on + strand, within MPMX20_00455at 470.758 kb on + strand, within MPMX20_00455at 470.812 kb on - strand, within MPMX20_00455at 470.871 kb on + strand, within MPMX20_00455at 470.879 kb on - strand, within MPMX20_00455at 470.910 kb on - strand, within MPMX20_00455at 471.085 kb on + strandat 471.093 kb on - strandat 471.093 kb on - strandat 471.128 kb on + strandat 471.276 kb on - strand, within MPMX20_00456at 471.291 kb on + strand, within MPMX20_00456at 471.325 kb on - strand, within MPMX20_00456at 471.410 kb on - strand, within MPMX20_00456at 471.428 kb on + strand, within MPMX20_00456at 471.428 kb on + strand, within MPMX20_00456at 471.590 kb on - strand, within MPMX20_00456at 471.663 kb on - strand, within MPMX20_00456at 471.705 kb on + strand, within MPMX20_00456at 471.705 kb on + strand, within MPMX20_00456at 471.713 kb on - strand, within MPMX20_00456at 471.715 kb on + strand, within MPMX20_00456at 471.715 kb on - strand, within MPMX20_00456at 471.723 kb on - strand, within MPMX20_00456at 471.743 kb on + strand, within MPMX20_00456at 471.774 kb on + strand, within MPMX20_00456at 471.784 kb on + strand, within MPMX20_00456at 471.842 kb on + strand, within MPMX20_00456at 471.898 kb on - strand, within MPMX20_00456at 471.928 kb on - strand, within MPMX20_00456at 471.928 kb on - strand, within MPMX20_00456at 471.935 kb on + strand, within MPMX20_00456at 471.993 kb on - strand, within MPMX20_00456at 472.104 kb on + strandat 472.104 kb on + strandat 472.104 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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468,878 + MPMX20_00454 0.28 -1.5
468,878 + MPMX20_00454 0.28 -0.6
468,905 - MPMX20_00454 0.30 -1.5
468,907 + MPMX20_00454 0.31 +0.1
468,939 - MPMX20_00454 0.33 -1.7
468,992 + MPMX20_00454 0.37 +0.6
469,024 + MPMX20_00454 0.40 -0.7
469,032 - MPMX20_00454 0.40 -1.0
469,032 - MPMX20_00454 0.40 -0.4
469,065 - MPMX20_00454 0.43 -1.6
469,091 + MPMX20_00454 0.45 -0.5
469,105 + MPMX20_00454 0.46 -1.8
469,125 + MPMX20_00454 0.48 -1.2
469,133 - MPMX20_00454 0.48 -1.6
469,161 - MPMX20_00454 0.50 -1.4
469,172 + MPMX20_00454 0.51 +1.3
469,186 - MPMX20_00454 0.52 +0.3
469,191 + MPMX20_00454 0.53 -0.7
469,199 - MPMX20_00454 0.53 -2.8
469,199 - MPMX20_00454 0.53 +1.2
469,236 - MPMX20_00454 0.56 -1.6
469,270 + MPMX20_00454 0.59 -2.1
469,275 + MPMX20_00454 0.59 -1.8
469,312 + MPMX20_00454 0.62 -1.0
469,321 - MPMX20_00454 0.63 +1.3
469,364 + MPMX20_00454 0.66 +1.3
469,517 + MPMX20_00454 0.78 -2.3
469,638 + MPMX20_00454 0.88 -1.3
469,670 + +0.1
469,693 + -0.7
469,702 - -1.4
469,702 - +0.3
469,719 - -0.9
469,747 + -0.7
469,768 + +1.9
469,790 - +0.7
470,050 + MPMX20_00455 0.16 -0.7
470,079 - MPMX20_00455 0.18 -0.7
470,093 + MPMX20_00455 0.19 -1.4
470,130 - MPMX20_00455 0.22 +1.3
470,140 + MPMX20_00455 0.23 -0.6
470,203 + MPMX20_00455 0.28 -1.9
470,312 - MPMX20_00455 0.36 -1.9
470,312 - MPMX20_00455 0.36 -0.0
470,388 + MPMX20_00455 0.42 -2.4
470,428 + MPMX20_00455 0.46 -0.3
470,501 - MPMX20_00455 0.51 -1.9
470,563 + MPMX20_00455 0.56 +0.3
470,571 - MPMX20_00455 0.57 -2.0
470,571 - MPMX20_00455 0.57 -0.9
470,590 + MPMX20_00455 0.58 -0.5
470,665 + MPMX20_00455 0.64 +0.1
470,668 - MPMX20_00455 0.65 -1.9
470,675 + MPMX20_00455 0.65 +1.8
470,694 + MPMX20_00455 0.67 -0.8
470,702 - MPMX20_00455 0.67 -1.2
470,735 + MPMX20_00455 0.70 -2.3
470,753 + MPMX20_00455 0.71 -1.2
470,758 + MPMX20_00455 0.72 -0.7
470,758 + MPMX20_00455 0.72 -2.3
470,758 + MPMX20_00455 0.72 -0.1
470,758 + MPMX20_00455 0.72 -3.3
470,812 - MPMX20_00455 0.76 +0.1
470,871 + MPMX20_00455 0.81 -1.1
470,879 - MPMX20_00455 0.81 -2.4
470,910 - MPMX20_00455 0.84 +0.2
471,085 + -0.4
471,093 - -1.3
471,093 - -1.7
471,128 + -1.4
471,276 - MPMX20_00456 0.16 +0.3
471,291 + MPMX20_00456 0.17 -2.0
471,325 - MPMX20_00456 0.21 -1.9
471,410 - MPMX20_00456 0.29 -3.7
471,428 + MPMX20_00456 0.31 -1.9
471,428 + MPMX20_00456 0.31 -0.4
471,590 - MPMX20_00456 0.47 -2.5
471,663 - MPMX20_00456 0.54 -0.8
471,705 + MPMX20_00456 0.58 -3.3
471,705 + MPMX20_00456 0.58 -1.9
471,713 - MPMX20_00456 0.59 -1.1
471,715 + MPMX20_00456 0.59 -2.0
471,715 - MPMX20_00456 0.59 -0.6
471,723 - MPMX20_00456 0.60 +0.6
471,743 + MPMX20_00456 0.62 -1.5
471,774 + MPMX20_00456 0.65 -2.7
471,784 + MPMX20_00456 0.66 -2.2
471,842 + MPMX20_00456 0.72 +0.1
471,898 - MPMX20_00456 0.78 -3.0
471,928 - MPMX20_00456 0.81 -2.3
471,928 - MPMX20_00456 0.81 -1.5
471,935 + MPMX20_00456 0.81 -1.4
471,993 - MPMX20_00456 0.87 -0.3
472,104 + +2.3
472,104 + +0.3
472,104 + -0.2

Or see this region's nucleotide sequence