Experiment: R2A with 3-octanone 2.65516666666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS15045 and ABIE51_RS15050 are separated by 96 nucleotides ABIE51_RS15050 and ABIE51_RS15055 are separated by 527 nucleotides
ABIE51_RS15045: ABIE51_RS15045 - TonB-dependent receptor, at 3,267,032 to 3,269,377
_RS15045
ABIE51_RS15050: ABIE51_RS15050 - uracil phosphoribosyltransferase, at 3,269,474 to 3,270,106
_RS15050
ABIE51_RS15055: ABIE51_RS15055 - aldehyde-activating protein, at 3,270,634 to 3,271,035
_RS15055
Position (kb)
3269
3270
3271 Strain fitness (log2 ratio)
-1
0
1 at 3268.710 kb on - strand, within ABIE51_RS15045 at 3268.976 kb on + strand, within ABIE51_RS15045 at 3268.976 kb on + strand, within ABIE51_RS15045 at 3268.976 kb on + strand, within ABIE51_RS15045 at 3268.977 kb on - strand, within ABIE51_RS15045 at 3269.042 kb on + strand, within ABIE51_RS15045 at 3269.042 kb on + strand, within ABIE51_RS15045 at 3269.043 kb on - strand, within ABIE51_RS15045 at 3269.106 kb on - strand, within ABIE51_RS15045 at 3269.307 kb on - strand at 3269.348 kb on + strand at 3269.348 kb on + strand at 3269.594 kb on + strand, within ABIE51_RS15050 at 3269.595 kb on - strand, within ABIE51_RS15050 at 3269.595 kb on - strand, within ABIE51_RS15050 at 3269.595 kb on - strand, within ABIE51_RS15050 at 3269.810 kb on + strand, within ABIE51_RS15050 at 3269.810 kb on + strand, within ABIE51_RS15050 at 3269.811 kb on - strand, within ABIE51_RS15050 at 3269.813 kb on + strand, within ABIE51_RS15050 at 3269.813 kb on + strand, within ABIE51_RS15050 at 3269.813 kb on + strand, within ABIE51_RS15050 at 3269.814 kb on - strand, within ABIE51_RS15050 at 3270.048 kb on - strand at 3270.048 kb on - strand at 3270.048 kb on - strand at 3270.048 kb on - strand at 3270.716 kb on + strand, within ABIE51_RS15055 at 3270.716 kb on + strand, within ABIE51_RS15055 at 3270.716 kb on + strand, within ABIE51_RS15055 at 3270.717 kb on - strand, within ABIE51_RS15055 at 3270.717 kb on - strand, within ABIE51_RS15055 at 3270.717 kb on - strand, within ABIE51_RS15055 at 3270.780 kb on - strand, within ABIE51_RS15055 at 3270.867 kb on - strand, within ABIE51_RS15055 at 3270.867 kb on - strand, within ABIE51_RS15055 at 3270.918 kb on - strand, within ABIE51_RS15055
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 2.65516666666667 mM remove 3,268,710 - ABIE51_RS15045 0.72 +0.0 3,268,976 + ABIE51_RS15045 0.83 +1.3 3,268,976 + ABIE51_RS15045 0.83 +0.1 3,268,976 + ABIE51_RS15045 0.83 +0.2 3,268,977 - ABIE51_RS15045 0.83 +0.4 3,269,042 + ABIE51_RS15045 0.86 +0.6 3,269,042 + ABIE51_RS15045 0.86 +0.5 3,269,043 - ABIE51_RS15045 0.86 -0.5 3,269,106 - ABIE51_RS15045 0.88 +0.2 3,269,307 - -0.0 3,269,348 + -0.9 3,269,348 + +0.1 3,269,594 + ABIE51_RS15050 0.19 -0.2 3,269,595 - ABIE51_RS15050 0.19 +0.1 3,269,595 - ABIE51_RS15050 0.19 +0.1 3,269,595 - ABIE51_RS15050 0.19 +0.1 3,269,810 + ABIE51_RS15050 0.53 +0.1 3,269,810 + ABIE51_RS15050 0.53 +0.5 3,269,811 - ABIE51_RS15050 0.53 +0.3 3,269,813 + ABIE51_RS15050 0.54 +0.0 3,269,813 + ABIE51_RS15050 0.54 -0.0 3,269,813 + ABIE51_RS15050 0.54 +0.1 3,269,814 - ABIE51_RS15050 0.54 +0.4 3,270,048 - -0.4 3,270,048 - -0.1 3,270,048 - +1.1 3,270,048 - +0.1 3,270,716 + ABIE51_RS15055 0.20 +0.3 3,270,716 + ABIE51_RS15055 0.20 +0.3 3,270,716 + ABIE51_RS15055 0.20 +0.5 3,270,717 - ABIE51_RS15055 0.21 +0.4 3,270,717 - ABIE51_RS15055 0.21 +0.2 3,270,717 - ABIE51_RS15055 0.21 +0.4 3,270,780 - ABIE51_RS15055 0.36 +0.2 3,270,867 - ABIE51_RS15055 0.58 -0.1 3,270,867 - ABIE51_RS15055 0.58 -0.1 3,270,918 - ABIE51_RS15055 0.71 +0.4
Or see this region's nucleotide sequence