Experiment: R2A with 3-octanone 5.31033333333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS10730 and ABIE51_RS10735 are separated by 28 nucleotides ABIE51_RS10735 and ABIE51_RS10740 are separated by 26 nucleotides ABIE51_RS10740 and ABIE51_RS10745 are separated by 85 nucleotides
ABIE51_RS10730: ABIE51_RS10730 - zinc-dependent alcohol dehydrogenase, at 2,331,174 to 2,332,343
_RS10730
ABIE51_RS10735: ABIE51_RS10735 - hypothetical protein, at 2,332,372 to 2,332,566
_RS10735
ABIE51_RS10740: ABIE51_RS10740 - SDR family oxidoreductase, at 2,332,593 to 2,333,477
_RS10740
ABIE51_RS10745: ABIE51_RS10745 - hypothetical protein, at 2,333,563 to 2,334,096
_RS10745
Position (kb)
2332
2333
2334 Strain fitness (log2 ratio)
-1
0
1 at 2331.649 kb on + strand, within ABIE51_RS10730 at 2331.650 kb on - strand, within ABIE51_RS10730 at 2331.653 kb on + strand, within ABIE51_RS10730 at 2331.654 kb on - strand, within ABIE51_RS10730 at 2331.947 kb on - strand, within ABIE51_RS10730 at 2332.211 kb on - strand, within ABIE51_RS10730 at 2332.211 kb on - strand, within ABIE51_RS10730 at 2332.316 kb on - strand at 2332.564 kb on + strand at 2332.565 kb on - strand at 2332.565 kb on - strand at 2332.888 kb on - strand, within ABIE51_RS10740 at 2333.061 kb on + strand, within ABIE51_RS10740 at 2333.062 kb on - strand, within ABIE51_RS10740 at 2333.062 kb on - strand, within ABIE51_RS10740 at 2333.202 kb on + strand, within ABIE51_RS10740 at 2333.202 kb on + strand, within ABIE51_RS10740 at 2333.202 kb on + strand, within ABIE51_RS10740 at 2333.203 kb on - strand, within ABIE51_RS10740 at 2333.203 kb on - strand, within ABIE51_RS10740 at 2333.203 kb on - strand, within ABIE51_RS10740 at 2333.433 kb on + strand at 2333.433 kb on + strand at 2333.434 kb on - strand at 2333.602 kb on + strand at 2333.603 kb on - strand at 2334.147 kb on + strand at 2334.232 kb on - strand at 2334.232 kb on - strand at 2334.346 kb on - strand at 2334.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 5.31033333333333 mM remove 2,331,649 + ABIE51_RS10730 0.41 +0.0 2,331,650 - ABIE51_RS10730 0.41 +0.5 2,331,653 + ABIE51_RS10730 0.41 +0.5 2,331,654 - ABIE51_RS10730 0.41 +1.2 2,331,947 - ABIE51_RS10730 0.66 +0.1 2,332,211 - ABIE51_RS10730 0.89 -0.0 2,332,211 - ABIE51_RS10730 0.89 -1.1 2,332,316 - +0.3 2,332,564 + +1.1 2,332,565 - +0.7 2,332,565 - +1.0 2,332,888 - ABIE51_RS10740 0.33 -0.1 2,333,061 + ABIE51_RS10740 0.53 +0.0 2,333,062 - ABIE51_RS10740 0.53 +0.4 2,333,062 - ABIE51_RS10740 0.53 +1.6 2,333,202 + ABIE51_RS10740 0.69 -0.1 2,333,202 + ABIE51_RS10740 0.69 -0.2 2,333,202 + ABIE51_RS10740 0.69 -0.9 2,333,203 - ABIE51_RS10740 0.69 +0.5 2,333,203 - ABIE51_RS10740 0.69 -0.6 2,333,203 - ABIE51_RS10740 0.69 -0.1 2,333,433 + -0.2 2,333,433 + +1.1 2,333,434 - -0.0 2,333,602 + +0.2 2,333,603 - +0.0 2,334,147 + +1.6 2,334,232 - +0.5 2,334,232 - +0.1 2,334,346 - +0.6 2,334,359 - +0.1
Or see this region's nucleotide sequence