Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12155

Experiment: R2A with 3-octanone 5.31033333333333 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 5.31033333333333 mM
2,622,472	+		ABIE51_RS12150	0.38	-1.4
2,622,472	+		ABIE51_RS12150	0.38	+0.8
2,622,472	+		ABIE51_RS12150	0.38	-0.0
2,622,473	-		ABIE51_RS12150	0.38	-0.3
2,622,578	-		ABIE51_RS12150	0.47	-1.3
2,622,709	+		ABIE51_RS12150	0.59	+0.1
2,622,709	+		ABIE51_RS12150	0.59	+0.1
2,622,709	+		ABIE51_RS12150	0.59	-0.1
2,622,709	+		ABIE51_RS12150	0.59	-0.7
2,622,710	-		ABIE51_RS12150	0.60	-0.2
2,622,710	-		ABIE51_RS12150	0.60	-0.9
2,622,710	-		ABIE51_RS12150	0.60	-0.4
2,622,710	-		ABIE51_RS12150	0.60	+0.0
2,622,718	+		ABIE51_RS12150	0.60	+0.4
2,622,718	+		ABIE51_RS12150	0.60	-0.3
2,622,718	+		ABIE51_RS12150	0.60	-0.1
2,622,811	+		ABIE51_RS12150	0.69	-1.1
2,622,811	+		ABIE51_RS12150	0.69	-1.1
2,622,811	+		ABIE51_RS12150	0.69	-2.2
2,622,811	+		ABIE51_RS12150	0.69	+0.5
2,622,812	-		ABIE51_RS12150	0.69	-0.4
2,622,812	-		ABIE51_RS12150	0.69	-0.3
2,622,812	-		ABIE51_RS12150	0.69	+0.3
2,622,812	-		ABIE51_RS12150	0.69	-0.8
2,622,862	+		ABIE51_RS12150	0.74	-0.2
2,622,862	+		ABIE51_RS12150	0.74	+1.2
2,622,862	+		ABIE51_RS12150	0.74	+0.0
2,622,862	+		ABIE51_RS12150	0.74	+0.6
2,622,863	-		ABIE51_RS12150	0.74	-0.5
2,622,863	-		ABIE51_RS12150	0.74	-2.4
2,622,863	-		ABIE51_RS12150	0.74	-0.1
2,622,863	-		ABIE51_RS12150	0.74	-0.4
2,622,950	-		ABIE51_RS12150	0.82	-0.2
2,622,950	-		ABIE51_RS12150	0.82	-0.9
2,623,202	+				+0.0
2,623,202	+				+0.1
2,623,202	+				-0.2
2,623,203	-				-0.9
2,623,203	-				+0.2
2,623,203	-				-0.5
2,623,203	-				+0.1
2,623,269	+				-0.4
2,623,269	+				-0.2
2,623,269	+				-0.1
2,623,269	+				-0.2
2,623,269	+				-0.1
2,623,269	+				+0.9
2,623,269	+				-0.4
2,623,269	+				+0.6
2,623,270	-				-1.2
2,623,270	-				-0.5
2,623,270	-				-0.2
2,623,270	-				-2.9
2,623,270	-				+1.1
2,623,270	-				-0.7
2,623,270	-				-0.9
2,623,271	+				+0.4
2,623,271	+				-0.0
2,623,271	+				+0.2
2,623,271	+				-0.6
2,623,272	-				-0.2
2,623,272	-				-0.3
2,623,272	-				+0.2
2,623,272	-				-1.2
2,623,272	-				+0.7
2,623,272	-				-0.2
2,623,272	-				-0.4
2,623,272	-				+0.3
2,623,396	+				-0.1
2,623,397	-				-0.0
2,623,570	+		ABIE51_RS12155	0.24	+0.3
2,623,570	+		ABIE51_RS12155	0.24	-0.5
2,623,570	+		ABIE51_RS12155	0.24	+2.1
2,623,570	+		ABIE51_RS12155	0.24	-0.3
2,623,570	+		ABIE51_RS12155	0.24	+0.0
2,623,571	-		ABIE51_RS12155	0.24	+0.1
2,623,571	-		ABIE51_RS12155	0.24	+0.2
2,623,571	-		ABIE51_RS12155	0.24	-0.3
2,623,571	-		ABIE51_RS12155	0.24	-0.1
2,623,571	-		ABIE51_RS12155	0.24	-0.8
2,623,571	-		ABIE51_RS12155	0.24	+0.4
2,623,582	+		ABIE51_RS12155	0.25	+0.5
2,623,583	-		ABIE51_RS12155	0.25	+0.1
2,623,583	-		ABIE51_RS12155	0.25	-0.3
2,623,583	-		ABIE51_RS12155	0.25	-0.7
2,623,736	-		ABIE51_RS12155	0.41	-1.2
2,623,736	-		ABIE51_RS12155	0.41	-0.1
2,623,837	+		ABIE51_RS12155	0.51	-0.3
2,623,837	+		ABIE51_RS12155	0.51	+0.2
2,623,837	+		ABIE51_RS12155	0.51	+0.8
2,623,837	+		ABIE51_RS12155	0.51	+0.5
2,623,838	-		ABIE51_RS12155	0.51	-0.2
2,623,838	-		ABIE51_RS12155	0.51	-0.9
2,623,838	-		ABIE51_RS12155	0.51	+0.1
2,623,838	-		ABIE51_RS12155	0.51	-0.8
2,623,838	-		ABIE51_RS12155	0.51	-0.3
2,623,838	-		ABIE51_RS12155	0.51	-0.3
2,623,909	+		ABIE51_RS12155	0.59	+0.7
2,623,973	-		ABIE51_RS12155	0.65	-0.1
2,624,032	+		ABIE51_RS12155	0.72	-1.0
2,624,122	+		ABIE51_RS12155	0.81	-0.4
2,624,123	-		ABIE51_RS12155	0.81	+0.4
2,624,123	-		ABIE51_RS12155	0.81	+0.7
2,624,123	-		ABIE51_RS12155	0.81	-0.1
2,624,123	-		ABIE51_RS12155	0.81	-1.0
2,624,251	+				-0.1
2,624,275	+				+0.5
2,624,275	+				-0.7
2,624,275	+				+0.2
2,624,275	+				-0.1
2,624,275	+				-0.3
2,624,275	+				+0.2
2,624,275	+				+0.6
2,624,275	+				-2.4
2,624,276	-				-0.7
2,624,276	-				+0.2
2,624,276	-				-0.1
2,624,276	-				-0.4
2,624,276	-				-0.4
2,624,276	-				-0.4
2,624,762	+		ABIE51_RS12160	0.41	-0.1
2,624,762	+		ABIE51_RS12160	0.41	-0.2
2,624,762	+		ABIE51_RS12160	0.41	+0.4
2,624,763	-		ABIE51_RS12160	0.41	+0.1
2,624,774	+		ABIE51_RS12160	0.43	+0.3
2,624,798	+		ABIE51_RS12160	0.47	+0.4
2,624,798	+		ABIE51_RS12160	0.47	-0.3
2,624,799	-		ABIE51_RS12160	0.47	-0.2
2,624,861	+		ABIE51_RS12160	0.56	-0.4
2,624,861	+		ABIE51_RS12160	0.56	+0.5
2,624,861	+		ABIE51_RS12160	0.56	-0.7
2,624,861	+		ABIE51_RS12160	0.56	-0.1
2,624,861	+		ABIE51_RS12160	0.56	-0.7
2,624,862	-		ABIE51_RS12160	0.56	-0.0
2,624,862	-		ABIE51_RS12160	0.56	+0.3
2,624,862	-		ABIE51_RS12160	0.56	-0.6
2,624,862	-		ABIE51_RS12160	0.56	-1.7
2,624,862	-		ABIE51_RS12160	0.56	-0.2
2,624,862	-		ABIE51_RS12160	0.56	+0.3
2,624,862	-		ABIE51_RS12160	0.56	-0.6
2,624,862	-		ABIE51_RS12160	0.56	-1.9
2,624,862	-		ABIE51_RS12160	0.56	-0.4
2,624,862	-		ABIE51_RS12160	0.56	-2.2
2,624,975	+		ABIE51_RS12160	0.74	+0.3
2,624,975	+		ABIE51_RS12160	0.74	-0.0
2,624,975	+		ABIE51_RS12160	0.74	-2.1
2,624,975	+		ABIE51_RS12160	0.74	-0.8
2,624,975	+		ABIE51_RS12160	0.74	+0.9
2,624,975	+		ABIE51_RS12160	0.74	-0.5
2,624,975	+		ABIE51_RS12160	0.74	-0.5
2,624,975	+		ABIE51_RS12160	0.74	+0.3
2,624,975	+		ABIE51_RS12160	0.74	-0.0
2,624,975	+		ABIE51_RS12160	0.74	+0.3
2,624,975	+		ABIE51_RS12160	0.74	+0.2
2,624,976	-		ABIE51_RS12160	0.74	+0.1
2,624,976	-		ABIE51_RS12160	0.74	-0.8
2,624,976	-		ABIE51_RS12160	0.74	-1.2
2,624,976	-		ABIE51_RS12160	0.74	-0.4
2,624,976	-		ABIE51_RS12160	0.74	+0.4
2,625,047	+		ABIE51_RS12160	0.85	+0.9
2,625,047	+		ABIE51_RS12160	0.85	+0.0
2,625,048	-		ABIE51_RS12160	0.85	+0.3
2,625,125	-				+1.2