Experiment: R2A with 3-octanone 5.31033333333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS05660 and ABIE51_RS05665 are separated by 65 nucleotides ABIE51_RS05665 and ABIE51_RS05670 are separated by 210 nucleotides ABIE51_RS05670 and ABIE51_RS05675 are separated by 4 nucleotides
ABIE51_RS05660: ABIE51_RS05660 - helix-turn-helix domain-containing protein, at 1,218,806 to 1,219,195
_RS05660
ABIE51_RS05665: ABIE51_RS05665 - molybdenum cofactor biosynthesis protein B, at 1,219,261 to 1,219,782
_RS05665
ABIE51_RS05670: ABIE51_RS05670 - PIG-L deacetylase family protein, at 1,219,993 to 1,220,610
_RS05670
ABIE51_RS05675: ABIE51_RS05675 - glycosyltransferase family 2 protein, at 1,220,615 to 1,221,751
_RS05675
Position (kb)
1219
1220
1221 Strain fitness (log2 ratio)
-2
-1
0
1 at 1219.805 kb on + strand at 1219.818 kb on - strand at 1219.902 kb on + strand at 1219.920 kb on + strand at 1219.983 kb on + strand at 1220.344 kb on + strand, within ABIE51_RS05670 at 1220.452 kb on + strand, within ABIE51_RS05670 at 1220.452 kb on + strand, within ABIE51_RS05670 at 1220.452 kb on + strand, within ABIE51_RS05670 at 1220.453 kb on - strand, within ABIE51_RS05670 at 1220.453 kb on - strand, within ABIE51_RS05670 at 1220.509 kb on + strand, within ABIE51_RS05670 at 1220.510 kb on - strand, within ABIE51_RS05670 at 1220.510 kb on - strand, within ABIE51_RS05670 at 1220.510 kb on - strand, within ABIE51_RS05670 at 1220.510 kb on - strand, within ABIE51_RS05670 at 1220.510 kb on - strand, within ABIE51_RS05670 at 1220.593 kb on + strand at 1220.593 kb on + strand at 1220.658 kb on - strand at 1220.727 kb on - strand at 1220.780 kb on + strand, within ABIE51_RS05675 at 1221.003 kb on - strand, within ABIE51_RS05675 at 1221.086 kb on + strand, within ABIE51_RS05675 at 1221.086 kb on + strand, within ABIE51_RS05675 at 1221.278 kb on + strand, within ABIE51_RS05675 at 1221.279 kb on - strand, within ABIE51_RS05675 at 1221.501 kb on - strand, within ABIE51_RS05675 at 1221.501 kb on - strand, within ABIE51_RS05675
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 5.31033333333333 mM remove 1,219,805 + -0.7 1,219,818 - +0.0 1,219,902 + +0.2 1,219,920 + -0.5 1,219,983 + +0.2 1,220,344 + ABIE51_RS05670 0.57 -0.4 1,220,452 + ABIE51_RS05670 0.74 +0.6 1,220,452 + ABIE51_RS05670 0.74 +0.6 1,220,452 + ABIE51_RS05670 0.74 +0.6 1,220,453 - ABIE51_RS05670 0.74 -0.5 1,220,453 - ABIE51_RS05670 0.74 +0.6 1,220,509 + ABIE51_RS05670 0.83 +1.0 1,220,510 - ABIE51_RS05670 0.84 +0.1 1,220,510 - ABIE51_RS05670 0.84 +0.3 1,220,510 - ABIE51_RS05670 0.84 -0.1 1,220,510 - ABIE51_RS05670 0.84 +0.9 1,220,510 - ABIE51_RS05670 0.84 +0.3 1,220,593 + -0.0 1,220,593 + +0.3 1,220,658 - -0.8 1,220,727 - +0.0 1,220,780 + ABIE51_RS05675 0.15 -0.1 1,221,003 - ABIE51_RS05675 0.34 +0.0 1,221,086 + ABIE51_RS05675 0.41 +1.5 1,221,086 + ABIE51_RS05675 0.41 -0.2 1,221,278 + ABIE51_RS05675 0.58 -2.0 1,221,279 - ABIE51_RS05675 0.58 -0.9 1,221,501 - ABIE51_RS05675 0.78 -0.8 1,221,501 - ABIE51_RS05675 0.78 +0.1
Or see this region's nucleotide sequence