Strain Fitness in Pantoea sp. MT58 around IAI47_14610

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
3,080,109	+		IAI47_14605	0.11	+0.4
3,080,109	+		IAI47_14605	0.11	+1.8
3,080,109	+		IAI47_14605	0.11	-1.1
3,080,110	-		IAI47_14605	0.11	+0.2
3,080,147	+		IAI47_14605	0.15	-0.6
3,080,148	-		IAI47_14605	0.15	+0.5
3,080,189	+		IAI47_14605	0.19	-1.0
3,080,190	-		IAI47_14605	0.19	+0.9
3,080,190	-		IAI47_14605	0.19	+0.8
3,080,190	-		IAI47_14605	0.19	+1.7
3,080,201	+		IAI47_14605	0.20	-0.2
3,080,201	+		IAI47_14605	0.20	-0.2
3,080,201	+		IAI47_14605	0.20	-0.3
3,080,201	+		IAI47_14605	0.20	+1.9
3,080,202	-		IAI47_14605	0.20	+0.3
3,080,202	-		IAI47_14605	0.20	+0.7
3,080,211	-		IAI47_14605	0.21	+0.6
3,080,211	-		IAI47_14605	0.21	-0.4
3,080,221	+		IAI47_14605	0.22	+0.2
3,080,221	+		IAI47_14605	0.22	+0.7
3,080,221	+		IAI47_14605	0.22	-1.1
3,080,221	+		IAI47_14605	0.22	-0.8
3,080,221	+		IAI47_14605	0.22	-0.1
3,080,221	+		IAI47_14605	0.22	+0.4
3,080,221	+		IAI47_14605	0.22	-0.3
3,080,221	+		IAI47_14605	0.22	+0.6
3,080,221	+		IAI47_14605	0.22	-0.4
3,080,221	+		IAI47_14605	0.22	-1.1
3,080,222	-		IAI47_14605	0.22	+0.2
3,080,222	-		IAI47_14605	0.22	+3.2
3,080,259	+		IAI47_14605	0.26	+0.3
3,080,259	+		IAI47_14605	0.26	+0.6
3,080,259	+		IAI47_14605	0.26	-0.9
3,080,259	+		IAI47_14605	0.26	+0.3
3,080,260	-		IAI47_14605	0.26	+0.5
3,080,260	-		IAI47_14605	0.26	-2.2
3,080,288	+		IAI47_14605	0.28	+1.3
3,080,288	+		IAI47_14605	0.28	-0.2
3,080,288	+		IAI47_14605	0.28	+1.1
3,080,310	-		IAI47_14605	0.30	-1.3
3,080,322	-		IAI47_14605	0.32	-0.3
3,080,385	+		IAI47_14605	0.38	-1.8
3,080,385	+		IAI47_14605	0.38	-1.3
3,080,385	+		IAI47_14605	0.38	-0.3
3,080,385	+		IAI47_14605	0.38	-0.2
3,080,386	-		IAI47_14605	0.38	+1.1
3,080,386	-		IAI47_14605	0.38	+0.2
3,080,429	+		IAI47_14605	0.42	+0.8
3,080,430	-		IAI47_14605	0.42	+1.0
3,080,441	+		IAI47_14605	0.43	-0.0
3,080,442	-		IAI47_14605	0.43	+0.3
3,080,442	-		IAI47_14605	0.43	+0.2
3,080,445	+		IAI47_14605	0.43	-0.0
3,080,445	+		IAI47_14605	0.43	+1.0
3,080,445	+		IAI47_14605	0.43	+0.2
3,080,446	-		IAI47_14605	0.44	+0.8
3,080,446	-		IAI47_14605	0.44	+0.3
3,080,478	-		IAI47_14605	0.47	+0.3
3,080,478	-		IAI47_14605	0.47	+1.6
3,080,478	-		IAI47_14605	0.47	+1.3
3,080,524	-		IAI47_14605	0.51	-0.3
3,080,537	+		IAI47_14605	0.52	+0.4
3,080,538	-		IAI47_14605	0.52	-0.8
3,080,538	-		IAI47_14605	0.52	-0.3
3,080,538	-		IAI47_14605	0.52	+0.4
3,080,589	+		IAI47_14605	0.57	-1.3
3,080,589	+		IAI47_14605	0.57	-1.2
3,080,590	-		IAI47_14605	0.57	+0.8
3,080,591	+		IAI47_14605	0.58	-0.3
3,080,591	+		IAI47_14605	0.58	+0.1
3,080,626	+		IAI47_14605	0.61	+1.2
3,080,658	+		IAI47_14605	0.64	+1.9
3,080,658	+		IAI47_14605	0.64	-0.2
3,080,731	+		IAI47_14605	0.71	-0.5
3,080,744	+		IAI47_14605	0.72	+0.9
3,080,744	+		IAI47_14605	0.72	-0.4
3,080,745	-		IAI47_14605	0.72	+0.4
3,080,771	-		IAI47_14605	0.75	+0.8
3,080,771	-		IAI47_14605	0.75	-0.3
3,080,771	-		IAI47_14605	0.75	+0.7
3,080,847	-		IAI47_14605	0.82	-0.5
3,080,855	+		IAI47_14605	0.83	+0.2
3,080,856	-		IAI47_14605	0.83	+0.3
3,080,856	-		IAI47_14605	0.83	-0.3
3,080,950	-				+0.2
3,080,961	+				+0.6
3,080,961	+				+0.3
3,080,961	+				+0.6
3,080,961	+				-0.9
3,080,961	+				-0.1
3,080,961	+				+0.8
3,080,961	+				-0.4
3,080,961	+				-0.1
3,080,961	+				+0.6
3,080,961	+				-0.1
3,080,961	+				-1.3
3,080,962	-				+0.2
3,080,962	-				+0.3
3,080,962	-				+0.3
3,080,962	-				+0.3
3,080,962	-				-1.1
3,080,962	-				-1.2
3,080,962	-				+1.5
3,080,962	-				+0.5
3,080,964	+				-0.4
3,080,964	+				+0.8
3,080,964	+				+0.1
3,080,965	-				-0.9
3,080,965	-				-0.8
3,080,965	-				+0.6
3,080,965	-				-0.1
3,080,965	-				-1.3
3,080,981	-				+0.9
3,080,990	+				-2.3
3,080,990	+				+0.5
3,080,991	-				+1.2
3,080,991	-				-1.2
3,080,991	-				-0.0
3,081,080	+				-0.6
3,081,080	+				-1.1
3,081,081	-				+0.7
3,081,081	-				+0.9
3,081,097	-				-2.1
3,081,112	+				-0.2
3,081,113	-				+0.9
3,081,113	-				+0.5
3,081,113	-				-1.0
3,081,116	+				-0.1
3,081,117	-				+0.7
3,081,148	+		IAI47_14610	0.10	+1.2
3,081,148	+		IAI47_14610	0.10	-0.4
3,081,149	-		IAI47_14610	0.10	-0.4
3,081,149	-		IAI47_14610	0.10	+0.8
3,081,149	-		IAI47_14610	0.10	-0.2
3,081,149	-		IAI47_14610	0.10	-0.2
3,081,152	-		IAI47_14610	0.11	+0.3
3,081,157	+		IAI47_14610	0.11	+0.7
3,081,158	-		IAI47_14610	0.11	-1.2
3,081,264	+		IAI47_14610	0.24	+0.5
3,081,264	+		IAI47_14610	0.24	-3.0
3,081,264	+		IAI47_14610	0.24	-0.1
3,081,264	+		IAI47_14610	0.24	-0.7
3,081,264	+		IAI47_14610	0.24	+1.1
3,081,264	+		IAI47_14610	0.24	+0.8
3,081,264	+		IAI47_14610	0.24	-0.4
3,081,265	-		IAI47_14610	0.24	-0.4
3,081,265	-		IAI47_14610	0.24	-0.8
3,081,265	-		IAI47_14610	0.24	-0.7
3,081,265	-		IAI47_14610	0.24	+1.2
3,081,265	-		IAI47_14610	0.24	+0.8
3,081,298	+		IAI47_14610	0.28	-0.6
3,081,298	+		IAI47_14610	0.28	+0.6
3,081,298	+		IAI47_14610	0.28	+1.3
3,081,298	+		IAI47_14610	0.28	+0.2
3,081,298	+		IAI47_14610	0.28	+0.7
3,081,298	+		IAI47_14610	0.28	-0.3
3,081,299	-		IAI47_14610	0.29	-0.9
3,081,299	-		IAI47_14610	0.29	+0.6
3,081,299	-		IAI47_14610	0.29	-0.5
3,081,299	-		IAI47_14610	0.29	-0.1
3,081,299	-		IAI47_14610	0.29	+0.5
3,081,299	-		IAI47_14610	0.29	+1.6
3,081,375	+		IAI47_14610	0.38	+0.2
3,081,375	+		IAI47_14610	0.38	+0.5
3,081,375	+		IAI47_14610	0.38	-0.3
3,081,442	-		IAI47_14610	0.46	-1.1
3,081,576	+		IAI47_14610	0.62	-0.8
3,081,577	-		IAI47_14610	0.62	+0.2
3,081,654	+		IAI47_14610	0.72	-0.9
3,081,654	+		IAI47_14610	0.72	+1.4
3,081,654	+		IAI47_14610	0.72	+0.4
3,081,654	+		IAI47_14610	0.72	+0.1
3,081,654	+		IAI47_14610	0.72	-0.1
3,081,654	+		IAI47_14610	0.72	+1.2
3,081,654	+		IAI47_14610	0.72	+1.0
3,081,655	-		IAI47_14610	0.72	-0.0
3,081,655	-		IAI47_14610	0.72	-2.1
3,081,655	-		IAI47_14610	0.72	-1.3
3,081,677	-		IAI47_14610	0.75	-0.1
3,081,777	+		IAI47_14610	0.87	+0.3
3,081,778	-		IAI47_14610	0.87	-0.0
3,081,778	-		IAI47_14610	0.87	-0.0
3,081,875	-				+0.6
3,081,913	+				+0.4
3,081,913	+				-1.0
3,081,913	+				+0.9
3,081,914	-				+0.7
3,081,914	-				+1.0
3,081,914	-				-2.6
3,081,914	-				-1.3
3,081,916	+				-0.0
3,081,916	+				+0.7
3,081,938	+				-1.5
3,081,939	-				+0.7
3,081,948	+				-0.1
3,081,948	+				+0.5
3,081,949	-				-1.7
3,081,949	-				+1.0
3,081,989	-				-0.7
3,081,989	-				+1.7
3,081,989	-				+0.4
3,081,997	+				+1.1
3,082,177	-		IAI47_14615	0.12	+1.1
3,082,203	+		IAI47_14615	0.13	-0.1
3,082,204	-		IAI47_14615	0.13	-0.0
3,082,204	-		IAI47_14615	0.13	+1.2
3,082,204	-		IAI47_14615	0.13	+1.0
3,082,204	-		IAI47_14615	0.13	+0.0
3,082,294	+		IAI47_14615	0.18	+0.2
3,082,294	+		IAI47_14615	0.18	-0.8
3,082,294	+		IAI47_14615	0.18	+0.7
3,082,294	+		IAI47_14615	0.18	+0.7
3,082,295	-		IAI47_14615	0.18	+0.1
3,082,295	-		IAI47_14615	0.18	+0.3
3,082,295	-		IAI47_14615	0.18	-0.7
3,082,295	-		IAI47_14615	0.18	-0.5
3,082,333	+		IAI47_14615	0.21	+0.5
3,082,348	+		IAI47_14615	0.22	-0.6
3,082,349	-		IAI47_14615	0.22	+0.3
3,082,349	-		IAI47_14615	0.22	+0.6
3,082,358	+		IAI47_14615	0.22	+1.1
3,082,358	+		IAI47_14615	0.22	-0.6
3,082,358	+		IAI47_14615	0.22	-0.3
3,082,359	-		IAI47_14615	0.22	-0.4
3,082,359	-		IAI47_14615	0.22	+0.1
3,082,430	+		IAI47_14615	0.26	+0.5
3,082,431	-		IAI47_14615	0.26	+0.5
3,082,510	+		IAI47_14615	0.31	+0.0
3,082,510	+		IAI47_14615	0.31	-0.0
3,082,510	+		IAI47_14615	0.31	-0.3
3,082,510	+		IAI47_14615	0.31	-0.1
3,082,511	-		IAI47_14615	0.31	-0.3
3,082,511	-		IAI47_14615	0.31	-0.7
3,082,511	-		IAI47_14615	0.31	-0.6
3,082,519	-		IAI47_14615	0.32	-1.7
3,082,519	-		IAI47_14615	0.32	-1.3
3,082,539	+		IAI47_14615	0.33	-0.2
3,082,539	+		IAI47_14615	0.33	-0.4
3,082,539	+		IAI47_14615	0.33	-1.2
3,082,539	+		IAI47_14615	0.33	-0.4
3,082,539	+		IAI47_14615	0.33	+0.8
3,082,539	+		IAI47_14615	0.33	+0.2
3,082,539	+		IAI47_14615	0.33	-1.8
3,082,540	-		IAI47_14615	0.33	+0.5
3,082,540	-		IAI47_14615	0.33	+0.2
3,082,540	-		IAI47_14615	0.33	-0.0
3,082,540	-		IAI47_14615	0.33	-0.9
3,082,599	+		IAI47_14615	0.36	-0.2
3,082,599	+		IAI47_14615	0.36	+0.1
3,082,599	+		IAI47_14615	0.36	-0.7
3,082,599	+		IAI47_14615	0.36	+0.2
3,082,599	+		IAI47_14615	0.36	+1.5
3,082,600	-		IAI47_14615	0.36	-0.0
3,082,600	-		IAI47_14615	0.36	-0.6
3,082,623	+		IAI47_14615	0.38	+0.4
3,082,623	+		IAI47_14615	0.38	+0.8
3,082,624	-		IAI47_14615	0.38	+1.4
3,082,624	-		IAI47_14615	0.38	-1.0
3,082,624	-		IAI47_14615	0.38	+0.7
3,082,642	+		IAI47_14615	0.39	-1.5
3,082,642	+		IAI47_14615	0.39	+1.3
3,082,643	-		IAI47_14615	0.39	+1.3
3,082,643	-		IAI47_14615	0.39	+0.3
3,082,678	+		IAI47_14615	0.41	+0.3
3,082,679	-		IAI47_14615	0.41	-0.4
3,082,728	+		IAI47_14615	0.44	+0.5
3,082,728	+		IAI47_14615	0.44	+0.2
3,082,728	+		IAI47_14615	0.44	+0.2
3,082,728	+		IAI47_14615	0.44	+1.4
3,082,728	+		IAI47_14615	0.44	-0.7
3,082,729	-		IAI47_14615	0.44	-1.4
3,082,729	-		IAI47_14615	0.44	+0.9
3,082,729	-		IAI47_14615	0.44	+0.5
3,082,729	-		IAI47_14615	0.44	-1.7
3,082,729	-		IAI47_14615	0.44	+1.0
3,082,729	-		IAI47_14615	0.44	-1.9
3,082,792	+		IAI47_14615	0.47	-1.5
3,082,792	+		IAI47_14615	0.47	-0.3
3,082,793	-		IAI47_14615	0.47	-1.2
3,082,793	-		IAI47_14615	0.47	+0.2
3,082,793	-		IAI47_14615	0.47	-0.3
3,082,865	+		IAI47_14615	0.52	+1.2
3,082,866	-		IAI47_14615	0.52	+0.4
3,082,873	+		IAI47_14615	0.52	-1.2
3,082,873	+		IAI47_14615	0.52	+0.5
3,082,873	+		IAI47_14615	0.52	+0.3
3,082,874	-		IAI47_14615	0.52	-1.1