Strain Fitness in Pantoea sp. MT58 around IAI47_13415

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
2,845,803	+		IAI47_13410	0.58	+0.2
2,845,803	+		IAI47_13410	0.58	-1.0
2,845,803	+		IAI47_13410	0.58	+0.4
2,845,803	+		IAI47_13410	0.58	+0.4
2,845,804	-		IAI47_13410	0.58	-0.6
2,845,804	-		IAI47_13410	0.58	+0.8
2,845,807	+		IAI47_13410	0.58	-0.4
2,845,807	+		IAI47_13410	0.58	-1.0
2,845,807	+		IAI47_13410	0.58	+0.6
2,845,808	-		IAI47_13410	0.58	+0.8
2,845,808	-		IAI47_13410	0.58	-1.1
2,845,831	+		IAI47_13410	0.59	-0.2
2,845,831	+		IAI47_13410	0.59	+1.8
2,845,832	-		IAI47_13410	0.59	-0.3
2,845,832	-		IAI47_13410	0.59	+0.6
2,845,832	-		IAI47_13410	0.59	+0.6
2,845,832	-		IAI47_13410	0.59	-0.7
2,845,846	+		IAI47_13410	0.60	+0.3
2,845,847	-		IAI47_13410	0.60	-0.2
2,845,847	-		IAI47_13410	0.60	-1.4
2,845,935	+		IAI47_13410	0.65	+0.0
2,846,047	+		IAI47_13410	0.71	+0.9
2,846,047	+		IAI47_13410	0.71	-0.4
2,846,048	-		IAI47_13410	0.71	+0.6
2,846,088	+		IAI47_13410	0.73	+0.2
2,846,088	+		IAI47_13410	0.73	-0.9
2,846,089	-		IAI47_13410	0.74	-1.8
2,846,089	-		IAI47_13410	0.74	+1.0
2,846,149	+		IAI47_13410	0.77	-0.0
2,846,150	-		IAI47_13410	0.77	+1.5
2,846,150	-		IAI47_13410	0.77	+0.3
2,846,150	-		IAI47_13410	0.77	+0.3
2,846,259	+		IAI47_13410	0.83	-0.3
2,846,259	+		IAI47_13410	0.83	+1.1
2,846,259	+		IAI47_13410	0.83	+0.8
2,846,259	+		IAI47_13410	0.83	-1.8
2,846,259	+		IAI47_13410	0.83	+1.3
2,846,259	+		IAI47_13410	0.83	-0.1
2,846,260	-		IAI47_13410	0.83	+1.1
2,846,260	-		IAI47_13410	0.83	-0.3
2,846,260	-		IAI47_13410	0.83	+1.2
2,846,260	-		IAI47_13410	0.83	-0.1
2,846,260	-		IAI47_13410	0.83	-0.2
2,846,260	-		IAI47_13410	0.83	+1.0
2,846,260	-		IAI47_13410	0.83	-0.5
2,846,272	+		IAI47_13410	0.84	+0.3
2,846,273	-		IAI47_13410	0.84	-0.7
2,846,277	+		IAI47_13410	0.84	+0.3
2,846,277	+		IAI47_13410	0.84	+0.5
2,846,278	-		IAI47_13410	0.84	-0.8
2,846,278	-		IAI47_13410	0.84	+0.5
2,846,278	-		IAI47_13410	0.84	-0.1
2,846,278	-		IAI47_13410	0.84	-0.8
2,846,304	+		IAI47_13410	0.85	+0.5
2,846,305	-		IAI47_13410	0.85	-0.4
2,846,305	-		IAI47_13410	0.85	+0.7
2,846,305	-		IAI47_13410	0.85	-0.3
2,846,344	+		IAI47_13410	0.88	+1.1
2,846,344	+		IAI47_13410	0.88	+0.2
2,846,345	-		IAI47_13410	0.88	+1.2
2,846,413	+				-0.5
2,846,414	-				+0.2
2,846,414	-				+0.4
2,846,434	+				+0.6
2,846,434	+				+0.6
2,846,475	+				-1.3
2,846,475	+				+0.6
2,846,475	+				-1.0
2,846,475	+				-0.7
2,846,475	+				+1.5
2,846,475	+				+1.0
2,846,476	-				-1.3
2,846,643	-				-0.8
2,846,647	-				+1.8
2,846,652	-				-0.2
2,846,666	-				+0.3
2,846,691	+				+0.8
2,846,692	-				-1.6
2,846,700	+				-0.0
2,846,700	+				+0.6
2,846,700	+				-2.3
2,846,700	+				-0.7
2,846,700	+				-0.9
2,846,700	+				-0.1
2,846,700	+				+0.9
2,846,700	+				-0.8
2,846,700	+				+0.8
2,846,701	-				+0.1
2,846,701	-				-1.4
2,846,701	-				+0.6
2,846,701	-				-1.4
2,846,701	-				-1.1
2,846,701	-				-1.1
2,846,701	-				-1.4
2,846,701	-				-1.2
2,846,701	-				-0.7
2,846,702	+				+0.8
2,846,702	+				+0.1
2,846,702	+				+1.8
2,846,702	+				-1.6
2,846,702	+				-0.6
2,846,702	+				+0.2
2,846,703	-				-1.8
2,846,703	-				-0.2
2,846,703	-				-1.4
2,846,703	-				-3.0
2,846,767	+				-0.6
2,846,858	+				-2.5
2,846,859	-				-1.9
2,846,908	+		IAI47_13415	0.11	-1.6
2,846,908	+		IAI47_13415	0.11	-1.4
2,846,909	-		IAI47_13415	0.11	-1.4
2,846,909	-		IAI47_13415	0.11	-1.4
2,846,957	+		IAI47_13415	0.15	-2.4
2,846,977	+		IAI47_13415	0.17	-2.8
2,846,978	-		IAI47_13415	0.17	-4.5
2,846,978	-		IAI47_13415	0.17	-3.0
2,846,978	-		IAI47_13415	0.17	-2.2
2,847,008	+		IAI47_13415	0.20	+0.6
2,847,008	+		IAI47_13415	0.20	-3.3
2,847,008	+		IAI47_13415	0.20	-1.7
2,847,009	-		IAI47_13415	0.20	-2.9
2,847,009	-		IAI47_13415	0.20	-1.1
2,847,088	+		IAI47_13415	0.27	-0.0
2,847,089	-		IAI47_13415	0.27	-0.5
2,847,111	-		IAI47_13415	0.29	-2.2
2,847,111	-		IAI47_13415	0.29	-1.6
2,847,111	-		IAI47_13415	0.29	-1.1
2,847,114	-		IAI47_13415	0.29	-1.5
2,847,114	-		IAI47_13415	0.29	-3.5
2,847,114	-		IAI47_13415	0.29	-2.9
2,847,114	-		IAI47_13415	0.29	-3.7
2,847,114	-		IAI47_13415	0.29	-2.5
2,847,116	+		IAI47_13415	0.29	-1.8
2,847,117	-		IAI47_13415	0.29	-2.7
2,847,117	-		IAI47_13415	0.29	-1.1
2,847,178	+		IAI47_13415	0.35	-1.1
2,847,178	+		IAI47_13415	0.35	-2.3
2,847,197	-		IAI47_13415	0.36	-0.2
2,847,197	-		IAI47_13415	0.36	-2.1
2,847,204	+		IAI47_13415	0.37	-2.0
2,847,211	+		IAI47_13415	0.38	-0.8
2,847,211	+		IAI47_13415	0.38	-1.4
2,847,211	+		IAI47_13415	0.38	-1.5
2,847,211	+		IAI47_13415	0.38	+0.9
2,847,211	+		IAI47_13415	0.38	-2.1
2,847,212	-		IAI47_13415	0.38	-2.6
2,847,212	-		IAI47_13415	0.38	-3.3
2,847,212	-		IAI47_13415	0.38	-3.6
2,847,247	+		IAI47_13415	0.41	-1.3
2,847,247	+		IAI47_13415	0.41	-2.2
2,847,247	+		IAI47_13415	0.41	-2.0
2,847,247	+		IAI47_13415	0.41	-1.8
2,847,247	+		IAI47_13415	0.41	-3.0
2,847,247	+		IAI47_13415	0.41	-2.7
2,847,247	+		IAI47_13415	0.41	-3.2
2,847,247	+		IAI47_13415	0.41	-1.8
2,847,247	+		IAI47_13415	0.41	-1.6
2,847,247	+		IAI47_13415	0.41	-1.5
2,847,247	+		IAI47_13415	0.41	-3.4
2,847,248	-		IAI47_13415	0.41	-1.5
2,847,248	-		IAI47_13415	0.41	-1.5
2,847,260	+		IAI47_13415	0.42	-0.9
2,847,327	-		IAI47_13415	0.48	-2.6
2,847,335	+		IAI47_13415	0.48	-0.7
2,847,335	+		IAI47_13415	0.48	-2.1
2,847,335	+		IAI47_13415	0.48	-1.8
2,847,335	+		IAI47_13415	0.48	-2.1
2,847,336	-		IAI47_13415	0.49	-2.1
2,847,350	+		IAI47_13415	0.50	-1.3
2,847,350	+		IAI47_13415	0.50	-3.0
2,847,350	+		IAI47_13415	0.50	-2.4
2,847,351	-		IAI47_13415	0.50	-3.2
2,847,351	-		IAI47_13415	0.50	-2.2
2,847,351	-		IAI47_13415	0.50	-2.8
2,847,443	+		IAI47_13415	0.58	-2.3
2,847,444	-		IAI47_13415	0.58	-3.9
2,847,471	+		IAI47_13415	0.60	-2.3
2,847,471	+		IAI47_13415	0.60	-2.6
2,847,472	-		IAI47_13415	0.60	-2.4
2,847,504	+		IAI47_13415	0.63	-2.2
2,847,504	+		IAI47_13415	0.63	-1.4
2,847,504	+		IAI47_13415	0.63	-2.3
2,847,504	+		IAI47_13415	0.63	-1.4
2,847,505	-		IAI47_13415	0.63	-1.7
2,847,524	+		IAI47_13415	0.65	-2.2
2,847,524	+		IAI47_13415	0.65	-1.6
2,847,524	+		IAI47_13415	0.65	-1.5
2,847,525	-		IAI47_13415	0.65	-0.7
2,847,538	+		IAI47_13415	0.66	-1.9
2,847,538	+		IAI47_13415	0.66	-2.2
2,847,539	-		IAI47_13415	0.66	-2.6
2,847,593	-		IAI47_13415	0.71	-2.5
2,847,652	+		IAI47_13415	0.76	-3.2
2,847,652	+		IAI47_13415	0.76	-2.7
2,847,653	-		IAI47_13415	0.76	-1.5
2,847,687	+		IAI47_13415	0.79	-1.3
2,847,688	-		IAI47_13415	0.79	-3.0
2,847,783	+		IAI47_13415	0.88	+0.2
2,847,809	-				-0.2
2,847,910	+				+0.1
2,847,921	-				-0.1
2,847,921	-				-1.0
2,847,921	-				+1.2
2,847,978	+				-0.9
2,847,978	+				+0.6
2,847,978	+				-0.3
2,847,979	-				-1.4
2,847,979	-				+0.9
2,847,996	+				+0.2
2,847,997	-				+0.2
2,848,029	+				-0.0
2,848,029	+				+0.1
2,848,029	+				+0.3
2,848,029	+				-0.2
2,848,030	-				+0.2
2,848,030	-				+1.2
2,848,030	-				-0.2
2,848,039	+				-0.3
2,848,039	+				-0.0
2,848,039	+				-0.4
2,848,039	+				-0.5
2,848,040	-				-0.6
2,848,040	-				+0.2
2,848,040	-				+0.6
2,848,040	-				+1.5
2,848,041	+				-0.3
2,848,041	+				+1.5
2,848,041	+				+0.8
2,848,041	+				-1.4
2,848,041	+				+0.1
2,848,041	+				-0.3
2,848,041	+				+0.5
2,848,041	+				+0.7
2,848,041	+				-0.8
2,848,042	-				+0.1
2,848,042	-				+0.0
2,848,042	-				+0.8
2,848,042	-				-1.0
2,848,051	-				-0.5
2,848,051	-				-0.3
2,848,075	+				+0.7
2,848,075	+				-0.3
2,848,076	-				+0.3
2,848,076	-				+1.6
2,848,076	-				+0.0
2,848,097	+				-0.9
2,848,097	+				+0.1
2,848,097	+				-0.4
2,848,097	+				+0.8
2,848,097	+				+0.9
2,848,098	-				-0.0
2,848,098	-				-0.7
2,848,098	-				+0.0
2,848,098	-				+1.6
2,848,098	-				+0.4
2,848,104	+				-0.3
2,848,104	+				-1.8
2,848,105	-				-1.6
2,848,105	-				-0.1
2,848,105	-				+0.7
2,848,105	-				-0.2
2,848,265	+				-0.0
2,848,265	+				+0.2
2,848,265	+				-0.4
2,848,266	-				-0.7
2,848,266	-				-1.2
2,848,281	+		IAI47_13420	0.11	+0.5
2,848,281	+		IAI47_13420	0.11	+0.4
2,848,281	+		IAI47_13420	0.11	+0.6
2,848,281	+		IAI47_13420	0.11	+0.1
2,848,282	-		IAI47_13420	0.11	+0.2
2,848,282	-		IAI47_13420	0.11	-0.1
2,848,282	-		IAI47_13420	0.11	-0.2
2,848,373	+		IAI47_13420	0.16	+0.1
2,848,373	+		IAI47_13420	0.16	-0.3
2,848,374	-		IAI47_13420	0.16	+0.7
2,848,374	-		IAI47_13420	0.16	-0.4
2,848,374	-		IAI47_13420	0.16	+1.5
2,848,383	+		IAI47_13420	0.17	-2.0
2,848,433	+		IAI47_13420	0.20	-0.7
2,848,439	+		IAI47_13420	0.21	-2.5
2,848,481	+		IAI47_13420	0.23	+0.5
2,848,482	-		IAI47_13420	0.23	-1.3
2,848,545	+		IAI47_13420	0.27	-0.5
2,848,545	+		IAI47_13420	0.27	+1.0
2,848,545	+		IAI47_13420	0.27	+2.5
2,848,545	+		IAI47_13420	0.27	-1.4
2,848,545	+		IAI47_13420	0.27	-0.7
2,848,545	+		IAI47_13420	0.27	-0.0
2,848,546	-		IAI47_13420	0.27	+0.5
2,848,546	-		IAI47_13420	0.27	-0.1
2,848,546	-		IAI47_13420	0.27	-0.1
2,848,546	-		IAI47_13420	0.27	-0.1
2,848,546	-		IAI47_13420	0.27	+0.9
2,848,546	-		IAI47_13420	0.27	+0.1
2,848,546	-		IAI47_13420	0.27	-0.8
2,848,546	-		IAI47_13420	0.27	+1.0
2,848,568	+		IAI47_13420	0.29	-0.1
2,848,568	+		IAI47_13420	0.29	-0.6
2,848,569	-		IAI47_13420	0.29	+1.0
2,848,569	-		IAI47_13420	0.29	-0.2
2,848,590	+		IAI47_13420	0.30	-0.1
2,848,591	-		IAI47_13420	0.30	+1.4
2,848,620	-		IAI47_13420	0.32	+0.3
2,848,693	+		IAI47_13420	0.36	-1.2
2,848,693	+		IAI47_13420	0.36	-0.7
2,848,693	+		IAI47_13420	0.36	+0.1
2,848,694	-		IAI47_13420	0.36	-0.6
2,848,722	+		IAI47_13420	0.38	+0.3
2,848,723	-		IAI47_13420	0.38	+0.7
2,848,732	+		IAI47_13420	0.39	+0.3
2,848,732	+		IAI47_13420	0.39	-0.1
2,848,732	+		IAI47_13420	0.39	-1.0
2,848,732	+		IAI47_13420	0.39	+0.2
2,848,732	+		IAI47_13420	0.39	-1.9
2,848,732	+		IAI47_13420	0.39	+0.6
2,848,732	+		IAI47_13420	0.39	+1.6
2,848,733	-		IAI47_13420	0.39	+0.1
2,848,733	-		IAI47_13420	0.39	-1.6
2,848,794	-		IAI47_13420	0.43	+0.3
2,848,794	-		IAI47_13420	0.43	-0.6
2,848,812	+		IAI47_13420	0.44	-1.0
2,848,813	-		IAI47_13420	0.44	-2.1
2,848,864	+		IAI47_13420	0.47	-0.0