Strain Fitness in Pantoea sp. MT58 around IAI47_12610

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
2,650,633	-				-0.9
2,650,633	-				-0.8
2,650,633	-				+0.5
2,650,633	-				+0.7
2,650,645	-				-0.4
2,650,645	-				+0.5
2,650,659	+				-0.7
2,650,715	+		IAI47_12600	0.21	-2.0
2,650,735	+		IAI47_12600	0.27	+0.3
2,650,735	+		IAI47_12600	0.27	-1.2
2,650,736	-		IAI47_12600	0.28	+0.1
2,650,736	-		IAI47_12600	0.28	-0.5
2,650,736	-		IAI47_12600	0.28	-0.6
2,650,742	+		IAI47_12600	0.30	-1.1
2,650,752	+		IAI47_12600	0.33	-0.6
2,650,801	+		IAI47_12600	0.48	-0.2
2,650,802	-		IAI47_12600	0.48	-0.2
2,650,802	-		IAI47_12600	0.48	-1.6
2,650,842	+		IAI47_12600	0.61	+0.7
2,650,842	+		IAI47_12600	0.61	-0.9
2,650,842	+		IAI47_12600	0.61	-1.4
2,650,842	+		IAI47_12600	0.61	+1.0
2,650,842	+		IAI47_12600	0.61	+1.2
2,650,842	+		IAI47_12600	0.61	+0.4
2,650,842	+		IAI47_12600	0.61	+0.5
2,650,843	-		IAI47_12600	0.61	+0.2
2,650,843	-		IAI47_12600	0.61	+1.5
2,650,843	-		IAI47_12600	0.61	-0.0
2,650,843	-		IAI47_12600	0.61	-0.5
2,650,843	-		IAI47_12600	0.61	-0.2
2,650,843	-		IAI47_12600	0.61	+0.1
2,650,846	+		IAI47_12600	0.62	+0.4
2,650,846	+		IAI47_12600	0.62	-0.4
2,650,846	+		IAI47_12600	0.62	-0.4
2,650,846	+		IAI47_12600	0.62	+0.6
2,650,846	+		IAI47_12600	0.62	+0.1
2,650,846	+		IAI47_12600	0.62	+0.9
2,650,846	+		IAI47_12600	0.62	-0.1
2,650,846	+		IAI47_12600	0.62	-0.9
2,650,846	+		IAI47_12600	0.62	-0.3
2,650,846	+		IAI47_12600	0.62	+0.3
2,650,847	-		IAI47_12600	0.63	+0.1
2,650,847	-		IAI47_12600	0.63	-0.6
2,650,847	-		IAI47_12600	0.63	+0.3
2,650,847	-		IAI47_12600	0.63	+0.2
2,650,847	-		IAI47_12600	0.63	+2.3
2,650,847	-		IAI47_12600	0.63	+0.6
2,650,847	-		IAI47_12600	0.63	-1.3
2,650,847	-		IAI47_12600	0.63	+2.8
2,650,847	-		IAI47_12600	0.63	-0.2
2,650,928	+		IAI47_12600	0.88	+1.0
2,650,928	+		IAI47_12600	0.88	+1.9
2,650,929	-		IAI47_12600	0.88	+0.5
2,650,963	+				+0.8
2,650,963	+				+0.6
2,650,963	+				+2.0
2,650,963	+				+0.6
2,650,963	+				-0.8
2,650,963	+				+0.1
2,650,963	+				+0.9
2,650,963	+				-0.7
2,650,964	-				+0.9
2,650,964	-				+0.3
2,651,000	+				-0.0
2,651,049	+		IAI47_12605	0.12	-0.4
2,651,097	+		IAI47_12605	0.24	-0.5
2,651,098	-		IAI47_12605	0.24	-0.5
2,651,098	-		IAI47_12605	0.24	+0.2
2,651,119	+		IAI47_12605	0.29	-0.0
2,651,120	-		IAI47_12605	0.29	-0.4
2,651,120	-		IAI47_12605	0.29	-0.6
2,651,120	-		IAI47_12605	0.29	+0.8
2,651,140	+		IAI47_12605	0.34	-0.6
2,651,140	+		IAI47_12605	0.34	-1.2
2,651,140	+		IAI47_12605	0.34	-0.1
2,651,141	-		IAI47_12605	0.34	-1.4
2,651,142	+		IAI47_12605	0.35	-1.0
2,651,142	+		IAI47_12605	0.35	+0.3
2,651,142	+		IAI47_12605	0.35	-0.3
2,651,142	+		IAI47_12605	0.35	-1.7
2,651,142	+		IAI47_12605	0.35	+0.3
2,651,143	-		IAI47_12605	0.35	-0.1
2,651,143	-		IAI47_12605	0.35	-1.8
2,651,143	-		IAI47_12605	0.35	+0.8
2,651,196	+		IAI47_12605	0.48	+0.3
2,651,196	+		IAI47_12605	0.48	+0.6
2,651,196	+		IAI47_12605	0.48	-0.6
2,651,197	-		IAI47_12605	0.48	-2.1
2,651,197	-		IAI47_12605	0.48	+0.5
2,651,212	+		IAI47_12605	0.51	-1.3
2,651,213	-		IAI47_12605	0.52	-0.9
2,651,231	+		IAI47_12605	0.56	+0.4
2,651,231	+		IAI47_12605	0.56	-1.8
2,651,232	-		IAI47_12605	0.56	-1.8
2,651,291	+		IAI47_12605	0.71	-1.6
2,651,291	+		IAI47_12605	0.71	+0.5
2,651,291	+		IAI47_12605	0.71	-0.0
2,651,291	+		IAI47_12605	0.71	-1.3
2,651,291	+		IAI47_12605	0.71	-0.2
2,651,292	-		IAI47_12605	0.71	+0.2
2,651,292	-		IAI47_12605	0.71	-1.1
2,651,309	+		IAI47_12605	0.75	+0.8
2,651,309	+		IAI47_12605	0.75	-0.4
2,651,309	+		IAI47_12605	0.75	+0.5
2,651,309	+		IAI47_12605	0.75	-0.7
2,651,309	+		IAI47_12605	0.75	-0.2
2,651,310	-		IAI47_12605	0.75	-1.9
2,651,310	-		IAI47_12605	0.75	-0.3
2,651,310	-		IAI47_12605	0.75	-0.1
2,651,310	-		IAI47_12605	0.75	+0.3
2,651,310	-		IAI47_12605	0.75	+0.7
2,651,324	+		IAI47_12605	0.79	-1.2
2,651,325	-		IAI47_12605	0.79	-1.6
2,651,325	-		IAI47_12605	0.79	-0.7
2,651,325	-		IAI47_12605	0.79	+0.7
2,651,325	-		IAI47_12605	0.79	-1.2
2,651,325	-		IAI47_12605	0.79	-0.0
2,651,359	+		IAI47_12605	0.87	-0.6
2,651,359	+		IAI47_12605	0.87	-1.2
2,651,359	+		IAI47_12605	0.87	-1.6
2,651,360	-		IAI47_12605	0.87	-0.4
2,651,360	-		IAI47_12605	0.87	+0.5
2,651,367	+		IAI47_12605	0.89	-0.5
2,651,368	-		IAI47_12605	0.89	-0.6
2,651,368	-		IAI47_12605	0.89	-0.1
2,651,368	-		IAI47_12605	0.89	-0.5
2,651,443	+				+0.2
2,651,443	+				+0.7
2,651,443	+				+0.3
2,651,443	+				-0.0
2,651,443	+				-1.0
2,651,443	+				-0.7
2,651,444	-				+1.9
2,651,444	-				+0.1
2,651,444	-				+0.2
2,651,444	-				-0.6
2,651,444	-				-0.1
2,651,444	-				+0.1
2,651,444	-				-0.0
2,651,444	-				+0.4
2,651,484	+				+0.8
2,651,484	+				-0.1
2,651,484	+				-0.4
2,651,485	-				-0.1
2,651,485	-				+1.2
2,651,485	-				-0.2
2,651,485	-				+1.4
2,651,504	+				-0.5
2,651,504	+				-0.5
2,651,504	+				-0.4
2,651,509	-				-1.2
2,651,509	-				+0.3
2,651,525	+				+0.7
2,651,576	+				+0.5
2,651,618	-				-0.9
2,651,621	+				+0.3
2,651,621	+				+1.6
2,651,621	+				+0.2
2,651,621	+				+0.3
2,651,621	+				-0.9
2,651,621	+				+0.7
2,651,621	+				-1.5
2,651,622	-				+0.6
2,651,622	-				+0.9
2,651,622	-				+0.3
2,651,622	-				+0.6
2,651,622	-				+0.1
2,651,622	-				+2.6
2,651,622	-				+1.4
2,651,622	-				-0.7
2,651,622	-				+0.2
2,651,622	-				+0.0
2,651,622	-				+0.5
2,651,622	-				+0.1
2,651,622	-				-1.5
2,651,622	-				+0.8
2,651,622	-				-0.4
2,651,622	-				+1.4
2,651,659	+		IAI47_12610	0.11	+0.6
2,651,659	+		IAI47_12610	0.11	+1.0
2,651,660	-		IAI47_12610	0.11	+1.1
2,651,660	-		IAI47_12610	0.11	-0.1
2,651,683	+		IAI47_12610	0.15	-1.4
2,651,683	+		IAI47_12610	0.15	-1.4
2,651,683	+		IAI47_12610	0.15	+0.6
2,651,684	-		IAI47_12610	0.15	+0.2
2,651,684	-		IAI47_12610	0.15	+0.6
2,651,684	-		IAI47_12610	0.15	+0.1
2,651,684	-		IAI47_12610	0.15	-0.9
2,651,684	-		IAI47_12610	0.15	+0.0
2,651,684	-		IAI47_12610	0.15	+0.9
2,651,820	+		IAI47_12610	0.36	+0.5
2,651,821	-		IAI47_12610	0.36	+1.6
2,651,870	+		IAI47_12610	0.44	+1.1
2,651,870	+		IAI47_12610	0.44	-0.7
2,651,870	+		IAI47_12610	0.44	+0.8
2,651,871	-		IAI47_12610	0.44	+0.0
2,651,871	-		IAI47_12610	0.44	+0.9
2,651,873	+		IAI47_12610	0.44	+0.2
2,651,873	+		IAI47_12610	0.44	-0.4
2,651,873	+		IAI47_12610	0.44	+0.0
2,651,873	+		IAI47_12610	0.44	+1.7
2,651,874	-		IAI47_12610	0.44	+0.4
2,651,910	+		IAI47_12610	0.50	-0.2
2,651,911	-		IAI47_12610	0.50	+0.9
2,651,930	+		IAI47_12610	0.53	-0.8
2,651,930	+		IAI47_12610	0.53	-0.6
2,651,930	+		IAI47_12610	0.53	+0.1
2,651,931	-		IAI47_12610	0.53	+1.7
2,651,931	-		IAI47_12610	0.53	+0.3
2,651,931	-		IAI47_12610	0.53	+0.8
2,651,967	-		IAI47_12610	0.59	+1.0
2,651,967	-		IAI47_12610	0.59	-0.2
2,651,967	-		IAI47_12610	0.59	+0.1
2,652,030	+		IAI47_12610	0.69	-0.8
2,652,030	+		IAI47_12610	0.69	+0.1
2,652,030	+		IAI47_12610	0.69	+0.8
2,652,031	-		IAI47_12610	0.69	-1.0
2,652,107	+		IAI47_12610	0.81	+1.5
2,652,198	-				+0.9
2,652,217	+				-0.2
2,652,217	+				-0.5
2,652,218	-				+0.5
2,652,222	-				+0.5
2,652,222	-				+0.6
2,652,231	+				+1.2
2,652,237	+				+0.7
2,652,251	+				-0.0
2,652,299	+				-0.4
2,652,300	-				+0.6
2,652,300	-				-1.2
2,652,300	-				+0.5
2,652,331	+				-0.4
2,652,332	-				+1.2
2,652,332	-				+1.3
2,652,332	-				-0.3
2,652,332	-				+1.2
2,652,339	-				-0.1
2,652,426	+		IAI47_12615	0.27	+1.2
2,652,426	+		IAI47_12615	0.27	+0.6
2,652,427	-		IAI47_12615	0.28	+0.8
2,652,455	+		IAI47_12615	0.34	+0.9
2,652,455	+		IAI47_12615	0.34	-0.6
2,652,456	-		IAI47_12615	0.34	-0.6
2,652,638	+		IAI47_12615	0.74	-0.0
2,652,674	+		IAI47_12615	0.81	-0.9
2,652,674	+		IAI47_12615	0.81	-0.9
2,652,674	+		IAI47_12615	0.81	-0.1
2,652,675	-		IAI47_12615	0.82	+0.1
2,652,675	-		IAI47_12615	0.82	-1.7
2,652,675	-		IAI47_12615	0.82	+0.2
2,652,675	-		IAI47_12615	0.82	-0.8
2,652,675	-		IAI47_12615	0.82	+0.9
2,652,677	+		IAI47_12615	0.82	-0.3
2,652,677	+		IAI47_12615	0.82	-1.7
2,652,677	+		IAI47_12615	0.82	-0.5
2,652,678	-		IAI47_12615	0.82	-1.1
2,652,678	-		IAI47_12615	0.82	-0.3
2,652,678	-		IAI47_12615	0.82	+0.3
2,652,713	+				+0.9
2,652,714	-				-1.1
2,652,714	-				+0.1
2,652,714	-				-0.4
2,652,735	+				-0.9
2,652,735	+				-0.5
2,652,735	+				+0.5
2,652,756	+				-0.4
2,652,756	+				-0.9
2,652,757	-				+0.1
2,652,768	+				+0.9
2,652,768	+				-0.7
2,652,769	-				+0.4
2,652,776	-				-1.1
2,652,776	-				-0.4
2,652,839	-				-0.9
2,652,839	-				+1.1
2,652,876	-				-0.1
2,652,876	-				+0.7
2,652,876	-				-1.0
2,652,876	-				+0.1
2,652,925	-				-0.4
2,652,926	-				-1.4
2,652,939	+				-0.5
2,652,940	-				+0.3
2,652,985	+		IAI47_12620	0.11	-0.9
2,652,986	-		IAI47_12620	0.11	-0.4
2,653,004	+		IAI47_12620	0.12	-0.1
2,653,004	+		IAI47_12620	0.12	-1.4
2,653,004	+		IAI47_12620	0.12	-1.5
2,653,005	-		IAI47_12620	0.12	-0.3
2,653,005	-		IAI47_12620	0.12	+0.5
2,653,041	+		IAI47_12620	0.14	+0.8
2,653,041	+		IAI47_12620	0.14	-0.2
2,653,042	-		IAI47_12620	0.14	-0.1
2,653,042	-		IAI47_12620	0.14	-0.2
2,653,042	-		IAI47_12620	0.14	+1.6
2,653,081	-		IAI47_12620	0.16	+0.9
2,653,087	+		IAI47_12620	0.16	-0.1
2,653,087	+		IAI47_12620	0.16	+1.2
2,653,087	+		IAI47_12620	0.16	-0.7
2,653,087	+		IAI47_12620	0.16	+1.6
2,653,088	-		IAI47_12620	0.16	-0.1
2,653,088	-		IAI47_12620	0.16	+0.7
2,653,103	+		IAI47_12620	0.17	-2.1
2,653,103	+		IAI47_12620	0.17	+0.1
2,653,104	-		IAI47_12620	0.17	-0.4
2,653,128	+		IAI47_12620	0.18	-1.6
2,653,128	+		IAI47_12620	0.18	-1.4
2,653,129	-		IAI47_12620	0.18	-0.4
2,653,129	-		IAI47_12620	0.18	+1.0
2,653,213	-		IAI47_12620	0.22	+0.1
2,653,213	-		IAI47_12620	0.22	+0.5
2,653,213	-		IAI47_12620	0.22	-0.7
2,653,213	-		IAI47_12620	0.22	-1.0
2,653,230	+		IAI47_12620	0.23	+1.8