Experiment: m.b. Tetracycline 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_746 and HP15_747 are separated by 165 nucleotides HP15_747 and HP15_748 are separated by 257 nucleotides
HP15_746: HP15_746 - two component transcriptional regulator, winged helix family, at 754,504 to 755,241
_746
HP15_747: HP15_747 - integral membrane sensor signal transduction histidine kinase, at 755,407 to 756,882
_747
HP15_748: HP15_748 - glycerol kinase, at 757,140 to 758,621
_748
Position (kb) 755
756
757 Strain fitness (log2 ratio) -2
-1
0
1 at 754.511 kb on + strand at 754.610 kb on + strand, within HP15_746 at 755.008 kb on + strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.124 kb on - strand, within HP15_746 at 755.137 kb on - strand, within HP15_746 at 755.193 kb on + strand at 755.193 kb on + strand at 755.215 kb on + strand at 755.298 kb on + strand at 755.792 kb on + strand, within HP15_747 at 755.925 kb on - strand, within HP15_747 at 756.243 kb on - strand, within HP15_747 at 756.314 kb on + strand, within HP15_747 at 756.317 kb on - strand, within HP15_747 at 756.342 kb on - strand, within HP15_747 at 756.509 kb on + strand, within HP15_747 at 756.851 kb on - strand at 756.872 kb on + strand at 756.877 kb on + strand at 756.891 kb on + strand at 756.896 kb on + strand at 756.954 kb on + strand at 756.959 kb on + strand at 756.962 kb on - strand at 757.169 kb on + strand at 757.336 kb on - strand, within HP15_748 at 757.406 kb on - strand, within HP15_748 at 757.683 kb on - strand, within HP15_748 at 757.727 kb on + strand, within HP15_748 at 757.735 kb on - strand, within HP15_748 at 757.803 kb on + strand, within HP15_748 at 757.803 kb on + strand, within HP15_748
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.025 mg/ml remove 754,511 + -0.2 754,610 + HP15_746 0.14 -0.2 755,008 + HP15_746 0.68 -0.2 755,016 - HP15_746 0.69 +0.5 755,016 - HP15_746 0.69 -0.3 755,124 - HP15_746 0.84 +0.1 755,137 - HP15_746 0.86 -0.2 755,193 + -0.4 755,193 + -0.4 755,215 + +0.4 755,298 + -0.4 755,792 + HP15_747 0.26 -2.0 755,925 - HP15_747 0.35 -1.2 756,243 - HP15_747 0.57 -0.7 756,314 + HP15_747 0.61 +0.4 756,317 - HP15_747 0.62 -0.3 756,342 - HP15_747 0.63 -1.4 756,509 + HP15_747 0.75 -0.1 756,851 - +0.1 756,872 + -0.1 756,877 + +0.5 756,891 + +0.0 756,896 + +0.1 756,954 + -0.4 756,959 + +0.1 756,962 - -1.0 757,169 + -0.3 757,336 - HP15_748 0.13 -0.5 757,406 - HP15_748 0.18 +0.2 757,683 - HP15_748 0.37 +0.3 757,727 + HP15_748 0.40 -0.4 757,735 - HP15_748 0.40 -0.2 757,803 + HP15_748 0.45 +0.3 757,803 + HP15_748 0.45 -0.5
Or see this region's nucleotide sequence