Strain Fitness in Marinobacter adhaerens HP15 around HP15_556

Experiment: m.b. Tetracycline 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_555 and HP15_556 overlap by 4 nucleotidesHP15_556 and HP15_557 are separated by 2 nucleotidesHP15_557 and HP15_558 are separated by 25 nucleotides HP15_555: HP15_555 - MraZ protein, at 575,042 to 575,494 _555 HP15_556: HP15_556 - S-adenosyl-L-methionine-dependent methyltransferase mraW, at 575,491 to 576,474 _556 HP15_557: HP15_557 - cell division protein, FtsL-like protein, at 576,477 to 576,881 _557 HP15_558: HP15_558 - penicillin-binding protein 3, at 576,907 to 578,655 _558 Position (kb) 575 576 577Strain fitness (log2 ratio) -1 0 1at 575.026 kb on + strandat 575.131 kb on + strand, within HP15_555at 575.237 kb on + strand, within HP15_555at 575.404 kb on + strand, within HP15_555at 575.606 kb on + strand, within HP15_556at 576.303 kb on + strand, within HP15_556at 576.403 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.025 mg/ml
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575,026 + -0.6
575,131 + HP15_555 0.20 +0.4
575,237 + HP15_555 0.43 +1.1
575,404 + HP15_555 0.80 -0.5
575,606 + HP15_556 0.12 -0.5
576,303 + HP15_556 0.83 -0.4
576,403 + -0.4

Or see this region's nucleotide sequence