Strain Fitness in Marinobacter adhaerens HP15 around HP15_2400
Experiment: m.b. Tetracycline 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Tetracycline 0.025 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,532,136 | + | HP15_2400 | 0.11 | +0.1 | |
| 2,532,173 | + | HP15_2400 | 0.15 | -0.5 | |
| 2,532,173 | + | HP15_2400 | 0.15 | -0.4 | |
| 2,532,269 | - | HP15_2400 | 0.25 | -0.8 | |
| 2,532,534 | + | HP15_2400 | 0.52 | -0.3 | |
| 2,532,534 | + | HP15_2400 | 0.52 | -0.4 | |
| 2,532,604 | + | HP15_2400 | 0.59 | -0.3 | |
| 2,532,631 | - | HP15_2400 | 0.62 | -0.9 | |
| 2,532,666 | + | HP15_2400 | 0.66 | +0.6 | |
| 2,532,795 | + | HP15_2400 | 0.79 | -0.4 | |
| 2,532,803 | - | HP15_2400 | 0.80 | -0.3 | |
| 2,532,805 | + | HP15_2400 | 0.80 | -2.1 | |
| 2,532,926 | + | +0.2 | |||
| 2,532,954 | - | +1.6 | |||
| 2,533,041 | + | -0.8 | |||
| 2,533,051 | + | -0.5 | |||
| 2,533,219 | + | -0.3 | |||
| 2,533,317 | - | HP15_2401 | 0.13 | -0.8 | |
| 2,533,441 | - | HP15_2401 | 0.18 | -0.1 | |
| 2,533,660 | + | HP15_2401 | 0.26 | -0.5 | |
| 2,533,680 | - | HP15_2401 | 0.27 | -0.7 | |
| 2,533,692 | + | HP15_2401 | 0.27 | -0.1 | |
| 2,533,749 | + | HP15_2401 | 0.30 | -0.8 | |
| 2,533,766 | + | HP15_2401 | 0.30 | -0.4 |
Or see this region's nucleotide sequence