Experiment: Pyruvate-Sulfate (60-15mM) with Fluorophosphate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt thiM and DVU2364 are separated by 329 nucleotides DVU2364 and DVU2365 are separated by 34 nucleotides
DVU2363: thiM - hydroxyethylthiazole kinase (TIGR), at 2,460,101 to 2,460,904
thiM
DVU2364: DVU2364 - aminotransferase, classes I and II (TIGR), at 2,461,234 to 2,462,400
DVU2364
DVU2365: DVU2365 - conserved hypothetical protein (TIGR), at 2,462,435 to 2,463,259
DVU2365
Position (kb)
2461
2462
2463 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2460.314 kb on + strand, within thiM at 2460.322 kb on - strand, within thiM at 2460.322 kb on - strand, within thiM at 2460.412 kb on - strand, within thiM at 2460.468 kb on + strand, within thiM at 2460.477 kb on - strand, within thiM at 2460.487 kb on - strand, within thiM at 2460.494 kb on - strand, within thiM at 2460.494 kb on - strand, within thiM at 2460.504 kb on + strand, within thiM at 2460.571 kb on - strand, within thiM at 2460.597 kb on + strand, within thiM at 2460.597 kb on + strand, within thiM at 2460.605 kb on - strand, within thiM at 2460.637 kb on + strand, within thiM at 2460.675 kb on - strand, within thiM at 2460.791 kb on - strand, within thiM at 2460.827 kb on - strand at 2460.892 kb on - strand at 2460.902 kb on + strand at 2460.902 kb on - strand at 2460.914 kb on + strand at 2460.947 kb on - strand at 2460.947 kb on - strand at 2461.065 kb on + strand at 2461.149 kb on - strand at 2461.167 kb on - strand at 2461.421 kb on + strand, within DVU2364 at 2461.429 kb on - strand, within DVU2364 at 2461.555 kb on + strand, within DVU2364 at 2461.823 kb on + strand, within DVU2364 at 2461.910 kb on + strand, within DVU2364 at 2461.928 kb on + strand, within DVU2364 at 2461.928 kb on + strand, within DVU2364 at 2461.977 kb on + strand, within DVU2364 at 2461.993 kb on - strand, within DVU2364 at 2462.058 kb on - strand, within DVU2364 at 2462.207 kb on + strand, within DVU2364 at 2462.212 kb on + strand, within DVU2364 at 2462.277 kb on - strand, within DVU2364 at 2462.385 kb on - strand at 2462.385 kb on - strand at 2462.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Fluorophosphate 1mM remove 2,460,314 + thiM DVU2363 0.26 -0.7 2,460,322 - thiM DVU2363 0.27 -0.1 2,460,322 - thiM DVU2363 0.27 +1.3 2,460,412 - thiM DVU2363 0.39 -0.9 2,460,468 + thiM DVU2363 0.46 -0.0 2,460,477 - thiM DVU2363 0.47 -0.2 2,460,487 - thiM DVU2363 0.48 -0.8 2,460,494 - thiM DVU2363 0.49 -0.1 2,460,494 - thiM DVU2363 0.49 +1.3 2,460,504 + thiM DVU2363 0.50 +0.8 2,460,571 - thiM DVU2363 0.58 -0.4 2,460,597 + thiM DVU2363 0.62 -1.7 2,460,597 + thiM DVU2363 0.62 -1.4 2,460,605 - thiM DVU2363 0.63 -0.0 2,460,637 + thiM DVU2363 0.67 -0.3 2,460,675 - thiM DVU2363 0.71 +0.1 2,460,791 - thiM DVU2363 0.86 -0.9 2,460,827 - +0.6 2,460,892 - -0.7 2,460,902 + -0.3 2,460,902 - -0.0 2,460,914 + -0.1 2,460,947 - -0.6 2,460,947 - -0.1 2,461,065 + -0.1 2,461,149 - -0.9 2,461,167 - -0.7 2,461,421 + DVU2364 0.16 -1.1 2,461,429 - DVU2364 0.17 -0.1 2,461,555 + DVU2364 0.28 -1.1 2,461,823 + DVU2364 0.50 -1.3 2,461,910 + DVU2364 0.58 -4.4 2,461,928 + DVU2364 0.59 -0.9 2,461,928 + DVU2364 0.59 +0.8 2,461,977 + DVU2364 0.64 -0.2 2,461,993 - DVU2364 0.65 -2.1 2,462,058 - DVU2364 0.71 -2.1 2,462,207 + DVU2364 0.83 +0.0 2,462,212 + DVU2364 0.84 -0.4 2,462,277 - DVU2364 0.89 +0.6 2,462,385 - -0.3 2,462,385 - +0.2 2,462,423 + +0.1
Or see this region's nucleotide sequence