Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34890

Experiment: L-Asparagine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (C)
3,660,758	+		PGA1_c34880	0.36	-0.6
3,660,766	-		PGA1_c34880	0.37	-2.3
3,660,785	+		PGA1_c34880	0.38	-2.0
3,660,791	-		PGA1_c34880	0.39	-1.0
3,660,793	-		PGA1_c34880	0.39	-1.0
3,660,802	-		PGA1_c34880	0.39	-0.5
3,660,943	-		PGA1_c34880	0.50	-0.4
3,660,944	+		PGA1_c34880	0.51	-2.4
3,660,959	+		PGA1_c34880	0.52	-1.6
3,660,967	-		PGA1_c34880	0.52	-1.6
3,660,977	+		PGA1_c34880	0.53	-0.1
3,660,985	-		PGA1_c34880	0.54	-0.7
3,660,990	+		PGA1_c34880	0.54	-0.6
3,660,990	+		PGA1_c34880	0.54	-0.3
3,660,998	-		PGA1_c34880	0.55	-2.2
3,660,998	-		PGA1_c34880	0.55	-0.2
3,660,998	-		PGA1_c34880	0.55	+0.5
3,660,998	-		PGA1_c34880	0.55	-1.6
3,661,029	-		PGA1_c34880	0.57	-1.1
3,661,031	-		PGA1_c34880	0.57	-1.2
3,661,101	+		PGA1_c34880	0.63	-1.9
3,661,101	+		PGA1_c34880	0.63	-1.1
3,661,109	-		PGA1_c34880	0.64	-2.7
3,661,109	-		PGA1_c34880	0.64	-0.4
3,661,109	-		PGA1_c34880	0.64	-2.1
3,661,109	-		PGA1_c34880	0.64	-1.5
3,661,111	+		PGA1_c34880	0.64	-0.5
3,661,116	+		PGA1_c34880	0.64	-1.9
3,661,119	-		PGA1_c34880	0.64	-1.2
3,661,149	+		PGA1_c34880	0.67	-2.1
3,661,194	+		PGA1_c34880	0.70	-0.9
3,661,216	-		PGA1_c34880	0.72	-1.9
3,661,232	+		PGA1_c34880	0.73	-1.2
3,661,236	+		PGA1_c34880	0.74	+0.4
3,661,236	+		PGA1_c34880	0.74	-1.6
3,661,236	+		PGA1_c34880	0.74	-1.2
3,661,238	+		PGA1_c34880	0.74	-0.2
3,661,240	-		PGA1_c34880	0.74	-1.2
3,661,244	-		PGA1_c34880	0.74	-2.1
3,661,246	-		PGA1_c34880	0.74	-2.2
3,661,248	+		PGA1_c34880	0.74	-0.6
3,661,251	-		PGA1_c34880	0.75	-1.2
3,661,261	+		PGA1_c34880	0.75	-0.8
3,661,270	+		PGA1_c34880	0.76	-1.2
3,661,278	-		PGA1_c34880	0.77	-0.7
3,661,328	+		PGA1_c34880	0.81	-0.4
3,661,335	+		PGA1_c34880	0.81	+0.2
3,661,335	+		PGA1_c34880	0.81	-1.2
3,661,343	-		PGA1_c34880	0.82	-1.1
3,661,343	-		PGA1_c34880	0.82	-1.4
3,661,343	-		PGA1_c34880	0.82	-0.9
3,661,343	-		PGA1_c34880	0.82	-1.7
3,661,343	-		PGA1_c34880	0.82	-1.3
3,661,343	-		PGA1_c34880	0.82	-1.7
3,661,351	-		PGA1_c34880	0.83	-0.2
3,661,356	+		PGA1_c34880	0.83	-1.3
3,661,405	+		PGA1_c34880	0.87	-2.3
3,661,410	-		PGA1_c34880	0.87	-1.0
3,661,415	+		PGA1_c34880	0.88	-1.2
3,661,423	-		PGA1_c34880	0.88	-0.1
3,661,492	+				-1.4
3,661,504	+				-0.5
3,661,504	-				+0.4
3,661,506	+				-0.1
3,661,512	-				-0.5
3,661,512	-				-0.6
3,661,514	-				-0.8
3,661,514	-				-1.4
3,661,517	-				-0.6
3,661,517	-				-2.3
3,661,529	+				-0.6
3,661,536	+				+0.0
3,661,581	-				-1.0
3,661,603	-				-0.2
3,661,613	-				-0.0
3,661,613	-				+0.7
3,661,621	+				-1.0
3,661,654	-				-0.6
3,661,667	+				+0.8
3,661,667	+				-0.4
3,661,667	+				-0.2
3,661,667	+				+0.1
3,661,667	+				-0.9
3,661,667	+				+0.0
3,661,667	+				-0.7
3,661,675	-				-0.6
3,661,675	-				-0.3
3,661,684	-				-0.4
3,661,756	+				-0.7
3,661,768	-				-0.6
3,661,788	+		PGA1_c34890	0.12	-1.9
3,661,788	+		PGA1_c34890	0.12	+0.6
3,661,788	+		PGA1_c34890	0.12	-1.3
3,661,793	+		PGA1_c34890	0.13	-1.0
3,661,794	-		PGA1_c34890	0.14	-0.9
3,661,796	-		PGA1_c34890	0.14	-2.0
3,661,801	-		PGA1_c34890	0.16	-0.7
3,661,803	-		PGA1_c34890	0.16	-2.4
3,661,805	+		PGA1_c34890	0.17	-0.5
3,661,806	+		PGA1_c34890	0.17	-2.9
3,661,808	-		PGA1_c34890	0.18	-2.1
3,661,813	-		PGA1_c34890	0.19	+0.7
3,661,814	-		PGA1_c34890	0.20	-0.4
3,661,836	+		PGA1_c34890	0.27	-2.2
3,661,836	+		PGA1_c34890	0.27	+1.4
3,661,836	+		PGA1_c34890	0.27	-1.1
3,661,836	+		PGA1_c34890	0.27	-1.1
3,661,836	+		PGA1_c34890	0.27	-1.6
3,661,836	+		PGA1_c34890	0.27	+0.6
3,661,836	+		PGA1_c34890	0.27	-1.4
3,661,836	+		PGA1_c34890	0.27	-0.9
3,661,844	-		PGA1_c34890	0.29	-1.9
3,661,844	-		PGA1_c34890	0.29	-1.4
3,661,844	-		PGA1_c34890	0.29	-0.2
3,661,844	-		PGA1_c34890	0.29	-0.5
3,661,845	-		PGA1_c34890	0.29	-2.5
3,661,852	-		PGA1_c34890	0.31	-2.6
3,661,860	+		PGA1_c34890	0.34	-0.8
3,661,880	+		PGA1_c34890	0.40	-0.7
3,661,880	+		PGA1_c34890	0.40	-1.5
3,661,880	+		PGA1_c34890	0.40	-1.5
3,661,880	+		PGA1_c34890	0.40	-2.1
3,661,880	+		PGA1_c34890	0.40	-1.3
3,661,888	-		PGA1_c34890	0.43	-2.2
3,661,888	-		PGA1_c34890	0.43	-2.5
3,661,888	-		PGA1_c34890	0.43	-1.7
3,661,888	-		PGA1_c34890	0.43	-1.1
3,661,888	-		PGA1_c34890	0.43	-1.6
3,661,888	-		PGA1_c34890	0.43	-1.7
3,661,888	-		PGA1_c34890	0.43	-2.2
3,661,890	+		PGA1_c34890	0.43	-1.1
3,661,924	-		PGA1_c34890	0.54	-1.4
3,661,924	-		PGA1_c34890	0.54	-0.3
3,661,960	+		PGA1_c34890	0.65	-2.3
3,661,968	-		PGA1_c34890	0.67	-0.7
3,661,968	-		PGA1_c34890	0.67	-1.2
3,661,968	-		PGA1_c34890	0.67	-0.7
3,661,970	+		PGA1_c34890	0.68	-1.1
3,661,975	+		PGA1_c34890	0.69	-1.7
3,661,975	+		PGA1_c34890	0.69	-0.2
3,661,975	+		PGA1_c34890	0.69	-0.4
3,661,986	+		PGA1_c34890	0.73	-1.5
3,661,986	+		PGA1_c34890	0.73	-2.0
3,661,993	+		PGA1_c34890	0.75	+0.4
3,661,995	+		PGA1_c34890	0.76	-0.6
3,662,043	+				-0.5
3,662,070	-				+0.5
3,662,075	-				-1.1
3,662,075	-				+0.3
3,662,075	-				+0.0
3,662,075	-				-0.1
3,662,075	-				+0.3
3,662,098	-				-0.3
3,662,100	+				-0.7
3,662,100	+				+0.2
3,662,100	+				-0.1
3,662,128	+				-0.5
3,662,161	+				-0.8
3,662,198	+				-0.4
3,662,221	-		PGA1_c34900	0.11	+0.6
3,662,222	-		PGA1_c34900	0.11	+0.3
3,662,258	+		PGA1_c34900	0.14	-0.3
3,662,258	+		PGA1_c34900	0.14	-0.5
3,662,263	+		PGA1_c34900	0.14	-0.6
3,662,265	+		PGA1_c34900	0.15	-0.2
3,662,266	-		PGA1_c34900	0.15	-0.1
3,662,266	-		PGA1_c34900	0.15	-0.9
3,662,266	-		PGA1_c34900	0.15	-0.7
3,662,266	-		PGA1_c34900	0.15	+0.3
3,662,266	-		PGA1_c34900	0.15	-1.1
3,662,328	-		PGA1_c34900	0.20	-0.2
3,662,333	-		PGA1_c34900	0.20	+0.6
3,662,348	+		PGA1_c34900	0.21	+0.2
3,662,348	+		PGA1_c34900	0.21	+0.3
3,662,348	+		PGA1_c34900	0.21	+0.4
3,662,354	-		PGA1_c34900	0.22	-1.0
3,662,356	-		PGA1_c34900	0.22	+0.1
3,662,356	-		PGA1_c34900	0.22	+0.6
3,662,356	-		PGA1_c34900	0.22	+0.8
3,662,356	-		PGA1_c34900	0.22	-0.4
3,662,356	-		PGA1_c34900	0.22	-0.2
3,662,356	-		PGA1_c34900	0.22	+0.6
3,662,356	-		PGA1_c34900	0.22	-0.2
3,662,419	+		PGA1_c34900	0.27	+0.7
3,662,419	+		PGA1_c34900	0.27	+0.4
3,662,427	-		PGA1_c34900	0.28	-0.9
3,662,427	-		PGA1_c34900	0.28	-1.1
3,662,494	+		PGA1_c34900	0.33	-1.3
3,662,502	-		PGA1_c34900	0.34	-0.1
3,662,536	+		PGA1_c34900	0.37	-0.4
3,662,544	-		PGA1_c34900	0.37	+0.5
3,662,544	-		PGA1_c34900	0.37	+1.8
3,662,560	-		PGA1_c34900	0.39	+0.6
3,662,616	-		PGA1_c34900	0.43	+0.5
3,662,622	-		PGA1_c34900	0.44	-0.5
3,662,622	-		PGA1_c34900	0.44	-0.5
3,662,650	+		PGA1_c34900	0.46	-1.0
3,662,667	+		PGA1_c34900	0.47	+0.1
3,662,669	+		PGA1_c34900	0.48	-0.6
3,662,675	-		PGA1_c34900	0.48	+0.9
3,662,787	+		PGA1_c34900	0.57	-0.2
3,662,796	+		PGA1_c34900	0.58	-0.5
3,662,797	+		PGA1_c34900	0.58	+0.7
3,662,797	+		PGA1_c34900	0.58	-0.2
3,662,797	+		PGA1_c34900	0.58	-1.4
3,662,805	-		PGA1_c34900	0.59	-0.7
3,662,805	-		PGA1_c34900	0.59	-0.2
3,662,805	-		PGA1_c34900	0.59	-0.7
3,662,817	-		PGA1_c34900	0.60	-0.7
3,662,827	-		PGA1_c34900	0.60	-0.5
3,662,898	+		PGA1_c34900	0.66	-2.3
3,662,901	-		PGA1_c34900	0.66	-0.8
3,662,906	+		PGA1_c34900	0.67	+0.0
3,662,911	+		PGA1_c34900	0.67	+0.0
3,662,919	-		PGA1_c34900	0.68	+0.4
3,662,924	+		PGA1_c34900	0.68	-0.4
3,662,932	-		PGA1_c34900	0.69	-0.7
3,662,932	-		PGA1_c34900	0.69	-0.1
3,663,009	+		PGA1_c34900	0.75	+0.7
3,663,011	+		PGA1_c34900	0.75	-0.3
3,663,019	-		PGA1_c34900	0.76	-0.2
3,663,024	+		PGA1_c34900	0.76	-0.6
3,663,054	-		PGA1_c34900	0.79	+0.6
3,663,061	+		PGA1_c34900	0.79	-0.8
3,663,068	+		PGA1_c34900	0.80	+0.2
3,663,069	-		PGA1_c34900	0.80	-1.3