Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28750

Experiment: L-Asparagine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (C)
3,012,911	-		PGA1_c28740	0.46	-0.7
3,012,912	+		PGA1_c28740	0.46	+0.6
3,012,912	+		PGA1_c28740	0.46	+0.0
3,012,912	+		PGA1_c28740	0.46	+0.2
3,012,912	+		PGA1_c28740	0.46	-0.2
3,012,920	-		PGA1_c28740	0.47	-0.1
3,012,988	-		PGA1_c28740	0.51	+0.5
3,013,026	-		PGA1_c28740	0.54	+0.1
3,013,026	-		PGA1_c28740	0.54	+1.6
3,013,037	+		PGA1_c28740	0.55	+0.7
3,013,058	-		PGA1_c28740	0.56	+0.3
3,013,058	-		PGA1_c28740	0.56	+0.1
3,013,058	-		PGA1_c28740	0.56	-0.1
3,013,147	+		PGA1_c28740	0.62	-0.9
3,013,270	-		PGA1_c28740	0.71	+0.0
3,013,271	-		PGA1_c28740	0.71	-0.4
3,013,273	+		PGA1_c28740	0.71	+0.5
3,013,281	-		PGA1_c28740	0.71	-0.2
3,013,391	+		PGA1_c28740	0.79	-0.2
3,013,391	+		PGA1_c28740	0.79	+0.0
3,013,399	-		PGA1_c28740	0.79	-1.3
3,013,399	-		PGA1_c28740	0.79	+0.5
3,013,399	-		PGA1_c28740	0.79	+0.0
3,013,416	-		PGA1_c28740	0.81	+1.9
3,013,431	+		PGA1_c28740	0.82	+0.5
3,013,439	-		PGA1_c28740	0.82	+0.5
3,013,510	+		PGA1_c28740	0.87	+0.1
3,013,521	+		PGA1_c28740	0.88	-0.2
3,013,566	+				-0.3
3,013,634	-				+0.1
3,013,674	+				+1.4
3,013,675	+				-0.2
3,013,683	-				-0.6
3,013,901	-				+0.5
3,013,906	-				+1.0
3,013,906	-				-0.2
3,013,908	+				-0.5
3,013,908	+				+0.1
3,013,913	+				+0.1
3,013,921	-				-2.2
3,013,921	-				-0.8
3,013,921	-				-1.9
3,013,921	-				-1.1
3,013,935	+				-1.0
3,013,935	+				-1.4
3,013,954	-				-0.7
3,013,966	+				-1.7
3,013,986	-				-0.6
3,013,986	-				+0.1
3,013,995	+				-1.8
3,014,035	+				-1.3
3,014,056	-		PGA1_c28750	0.11	-0.8
3,014,093	+		PGA1_c28750	0.14	-0.9
3,014,101	-		PGA1_c28750	0.14	-0.9
3,014,101	-		PGA1_c28750	0.14	-0.8
3,014,111	-		PGA1_c28750	0.15	-1.0
3,014,113	+		PGA1_c28750	0.15	-0.2
3,014,148	+		PGA1_c28750	0.18	-0.7
3,014,148	+		PGA1_c28750	0.18	-1.1
3,014,148	+		PGA1_c28750	0.18	-1.2
3,014,156	-		PGA1_c28750	0.19	-1.7
3,014,158	+		PGA1_c28750	0.19	-1.5
3,014,166	-		PGA1_c28750	0.19	-1.4
3,014,166	-		PGA1_c28750	0.19	-2.2
3,014,190	-		PGA1_c28750	0.21	-0.6
3,014,236	+		PGA1_c28750	0.25	+0.5
3,014,254	-		PGA1_c28750	0.26	-1.2
3,014,319	+		PGA1_c28750	0.31	-1.3
3,014,319	+		PGA1_c28750	0.31	-1.1
3,014,319	+		PGA1_c28750	0.31	-2.8
3,014,319	+		PGA1_c28750	0.31	-0.6
3,014,319	+		PGA1_c28750	0.31	-1.1
3,014,322	-		PGA1_c28750	0.31	-1.6
3,014,324	+		PGA1_c28750	0.31	-1.3
3,014,327	-		PGA1_c28750	0.32	-0.6
3,014,373	-		PGA1_c28750	0.35	-1.4
3,014,384	+		PGA1_c28750	0.36	-1.6
3,014,425	-		PGA1_c28750	0.39	+0.0
3,014,426	-		PGA1_c28750	0.39	-2.3
3,014,477	+		PGA1_c28750	0.43	-2.1
3,014,485	-		PGA1_c28750	0.43	-1.4
3,014,485	-		PGA1_c28750	0.43	-0.7
3,014,487	+		PGA1_c28750	0.44	-1.0
3,014,512	+		PGA1_c28750	0.46	-1.5
3,014,516	-		PGA1_c28750	0.46	-1.0
3,014,578	-		PGA1_c28750	0.50	-0.2
3,014,579	+		PGA1_c28750	0.51	-1.4
3,014,579	+		PGA1_c28750	0.51	-2.4
3,014,587	-		PGA1_c28750	0.51	-2.2
3,014,587	-		PGA1_c28750	0.51	-1.4
3,014,587	-		PGA1_c28750	0.51	-2.5
3,014,587	-		PGA1_c28750	0.51	-0.7
3,014,590	+		PGA1_c28750	0.51	-0.6
3,014,627	+		PGA1_c28750	0.54	-1.2
3,014,627	+		PGA1_c28750	0.54	-3.4
3,014,627	+		PGA1_c28750	0.54	+0.0
3,014,731	+		PGA1_c28750	0.62	-3.3
3,014,731	+		PGA1_c28750	0.62	-0.3
3,014,731	+		PGA1_c28750	0.62	-0.7
3,014,731	+		PGA1_c28750	0.62	+0.5
3,014,739	-		PGA1_c28750	0.63	+1.1
3,014,739	-		PGA1_c28750	0.63	-1.4
3,014,739	-		PGA1_c28750	0.63	-1.1
3,014,780	+		PGA1_c28750	0.66	-0.6
3,014,804	-		PGA1_c28750	0.68	-0.9
3,014,845	+		PGA1_c28750	0.71	-0.6
3,014,929	+		PGA1_c28750	0.77	-0.3
3,015,107	+				-2.0
3,015,196	+				-0.5
3,015,201	+				-1.0
3,015,209	-				-0.8
3,015,230	+				-0.8
3,015,235	-				-2.0
3,015,262	+				-0.7
3,015,336	+		PGA1_c28760	0.13	-0.1
3,015,339	-		PGA1_c28760	0.13	-0.7
3,015,344	-		PGA1_c28760	0.14	-1.0
3,015,404	-		PGA1_c28760	0.21	-0.7
3,015,457	-		PGA1_c28760	0.28	-0.6
3,015,457	-		PGA1_c28760	0.28	-2.2
3,015,508	+		PGA1_c28760	0.34	-0.7
3,015,572	+		PGA1_c28760	0.42	-0.4
3,015,609	+		PGA1_c28760	0.47	-0.8
3,015,609	+		PGA1_c28760	0.47	-0.9
3,015,627	-		PGA1_c28760	0.49	+0.4
3,015,649	-		PGA1_c28760	0.52	-1.1
3,015,656	-		PGA1_c28760	0.53	-1.1
3,015,706	+		PGA1_c28760	0.59	-1.8
3,015,708	-		PGA1_c28760	0.59	-1.9
3,015,714	-		PGA1_c28760	0.60	-1.0
3,015,720	-		PGA1_c28760	0.61	-0.8
3,015,746	+		PGA1_c28760	0.64	-1.3
3,015,746	-		PGA1_c28760	0.64	-1.0
3,015,746	-		PGA1_c28760	0.64	-0.7
3,015,811	-		PGA1_c28760	0.72	-2.4
3,015,818	+		PGA1_c28760	0.73	-1.2
3,015,826	-		PGA1_c28760	0.74	-2.3
3,015,893	+		PGA1_c28760	0.82	-0.7
3,015,897	+		PGA1_c28760	0.83	-1.8
3,015,901	-		PGA1_c28760	0.83	-1.5
3,015,964	+				-1.1
3,016,053	-				-1.2
3,016,164	-				-0.4
3,016,188	+				-0.4
3,016,219	+				+0.3
3,016,219	+				-0.4
3,016,219	+				+1.1
3,016,219	+				+0.5
3,016,219	+				-1.6
3,016,222	-				-0.3
3,016,223	+				-1.0
3,016,227	-				-1.0
3,016,227	-				+0.7
3,016,227	-				-0.2
3,016,228	+				-0.5