Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22730

Experiment: L-Asparagine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (C)
2,354,481	+		PGA1_c22720	0.15	+0.3
2,354,504	-		PGA1_c22720	0.18	-0.5
2,354,533	-		PGA1_c22720	0.21	-0.3
2,354,554	-		PGA1_c22720	0.23	+0.3
2,354,567	+		PGA1_c22720	0.24	+0.0
2,354,579	-		PGA1_c22720	0.25	-0.2
2,354,585	-		PGA1_c22720	0.26	-0.4
2,354,648	-		PGA1_c22720	0.32	-0.0
2,354,699	+		PGA1_c22720	0.37	-0.1
2,354,702	-		PGA1_c22720	0.37	+1.6
2,354,710	+		PGA1_c22720	0.38	+0.4
2,354,718	-		PGA1_c22720	0.39	+0.2
2,354,718	-		PGA1_c22720	0.39	-0.4
2,354,718	-		PGA1_c22720	0.39	+0.8
2,354,720	+		PGA1_c22720	0.39	+0.6
2,354,730	-		PGA1_c22720	0.40	-0.3
2,354,744	-		PGA1_c22720	0.41	+0.5
2,354,761	-		PGA1_c22720	0.43	+0.1
2,354,803	-		PGA1_c22720	0.47	+0.2
2,354,811	+		PGA1_c22720	0.48	+0.5
2,354,840	+		PGA1_c22720	0.51	-0.1
2,354,840	+		PGA1_c22720	0.51	+0.4
2,354,853	+		PGA1_c22720	0.52	-0.1
2,354,853	+		PGA1_c22720	0.52	-0.4
2,354,853	+		PGA1_c22720	0.52	+1.4
2,354,853	+		PGA1_c22720	0.52	+0.5
2,354,861	-		PGA1_c22720	0.53	-0.1
2,354,862	+		PGA1_c22720	0.53	-0.7
2,354,870	-		PGA1_c22720	0.54	-0.3
2,354,873	+		PGA1_c22720	0.54	+0.6
2,354,918	-		PGA1_c22720	0.58	-0.3
2,354,925	-		PGA1_c22720	0.59	-0.2
2,354,943	+		PGA1_c22720	0.61	-0.2
2,354,943	+		PGA1_c22720	0.61	+0.1
2,354,943	+		PGA1_c22720	0.61	-1.0
2,354,955	+		PGA1_c22720	0.62	-1.5
2,354,955	+		PGA1_c22720	0.62	+0.2
2,354,955	+		PGA1_c22720	0.62	+0.3
2,354,995	-		PGA1_c22720	0.66	+1.6
2,355,079	+		PGA1_c22720	0.74	-0.6
2,355,087	-		PGA1_c22720	0.75	+0.4
2,355,087	-		PGA1_c22720	0.75	-0.3
2,355,087	-		PGA1_c22720	0.75	+0.8
2,355,112	-		PGA1_c22720	0.77	-0.1
2,355,112	-		PGA1_c22720	0.77	-0.6
2,355,144	-		PGA1_c22720	0.80	-1.5
2,355,146	+		PGA1_c22720	0.81	+1.1
2,355,252	+				-0.6
2,355,337	+				+0.6
2,355,345	+				+1.6
2,355,347	+				-0.6
2,355,353	-				-0.4
2,355,355	+				-0.8
2,355,355	-				+0.5
2,355,355	-				-1.5
2,355,395	-				-0.4
2,355,486	-				-0.6
2,355,488	+				-0.1
2,355,488	+				-0.0
2,355,496	-				-0.2
2,355,496	-				-0.9
2,355,498	+				-0.0
2,355,518	+				+0.3
2,355,536	+				-1.3
2,355,579	-				+0.6
2,355,581	+				+0.4
2,355,589	-				-0.8
2,355,595	-		PGA1_c22730	0.10	-0.4
2,355,595	-		PGA1_c22730	0.10	-0.2
2,355,598	+		PGA1_c22730	0.11	+0.2
2,355,598	+		PGA1_c22730	0.11	-1.0
2,355,598	+		PGA1_c22730	0.11	+0.4
2,355,606	-		PGA1_c22730	0.11	+0.7
2,355,606	-		PGA1_c22730	0.11	-0.1
2,355,606	-		PGA1_c22730	0.11	+1.0
2,355,606	-		PGA1_c22730	0.11	-0.2
2,355,606	-		PGA1_c22730	0.11	+0.3
2,355,628	+		PGA1_c22730	0.13	-0.0
2,355,665	+		PGA1_c22730	0.16	+0.8
2,355,683	-		PGA1_c22730	0.18	-0.0
2,355,683	-		PGA1_c22730	0.18	+0.1
2,355,690	+		PGA1_c22730	0.18	+1.1
2,355,704	-		PGA1_c22730	0.20	-0.5
2,355,708	-		PGA1_c22730	0.20	-0.9
2,355,710	+		PGA1_c22730	0.20	-0.0
2,355,742	+		PGA1_c22730	0.23	-1.4
2,355,771	+		PGA1_c22730	0.25	-0.3
2,355,779	-		PGA1_c22730	0.26	-0.1
2,355,781	+		PGA1_c22730	0.26	-0.7
2,355,781	+		PGA1_c22730	0.26	+0.4
2,355,789	+		PGA1_c22730	0.27	+0.9
2,355,789	-		PGA1_c22730	0.27	-0.4
2,355,789	-		PGA1_c22730	0.27	-0.1
2,355,789	-		PGA1_c22730	0.27	+0.6
2,355,791	+		PGA1_c22730	0.27	-0.2
2,355,791	+		PGA1_c22730	0.27	-1.3
2,355,794	-		PGA1_c22730	0.27	-0.3
2,355,839	+		PGA1_c22730	0.31	-1.6
2,355,893	-		PGA1_c22730	0.36	-0.3
2,356,016	+		PGA1_c22730	0.46	+0.5
2,356,079	-		PGA1_c22730	0.51	-0.1
2,356,079	-		PGA1_c22730	0.51	+0.0
2,356,079	-		PGA1_c22730	0.51	+0.2
2,356,119	+		PGA1_c22730	0.55	-1.1
2,356,148	+		PGA1_c22730	0.57	-0.8
2,356,171	+		PGA1_c22730	0.59	+0.1
2,356,177	-		PGA1_c22730	0.60	+0.1
2,356,179	-		PGA1_c22730	0.60	+0.0
2,356,211	+		PGA1_c22730	0.62	+0.2
2,356,326	+		PGA1_c22730	0.72	-1.4
2,356,326	+		PGA1_c22730	0.72	+0.1
2,356,344	+		PGA1_c22730	0.74	+0.6
2,356,381	+		PGA1_c22730	0.77	-0.3
2,356,384	-		PGA1_c22730	0.77	+0.0
2,356,393	-		PGA1_c22730	0.78	-0.0
2,356,429	+		PGA1_c22730	0.81	+0.2
2,356,471	-		PGA1_c22730	0.84	+0.3
2,356,487	-		PGA1_c22730	0.86	+0.4
2,356,597	+				+0.5
2,356,605	-				+0.2
2,356,610	+				+0.8
2,356,618	-				-0.7
2,356,630	+				+0.6
2,356,731	+				-0.7
2,356,739	-				+0.0
2,356,750	-				+0.3
2,356,768	+				-0.8
2,356,806	-				+1.0
2,356,813	+				+0.9
2,356,821	-				+0.2
2,356,826	-				+0.8
2,356,853	+				+1.0
2,356,876	+		PGA1_c22740	0.11	-0.2
2,356,992	+		PGA1_c22740	0.16	-0.3
2,357,019	-		PGA1_c22740	0.17	+0.4
2,357,058	-		PGA1_c22740	0.19	-0.1
2,357,118	-		PGA1_c22740	0.22	-0.9
2,357,120	+		PGA1_c22740	0.22	-0.8
2,357,120	+		PGA1_c22740	0.22	+0.1
2,357,120	+		PGA1_c22740	0.22	+0.5
2,357,128	-		PGA1_c22740	0.22	-0.5
2,357,128	-		PGA1_c22740	0.22	-1.2
2,357,128	-		PGA1_c22740	0.22	-1.1
2,357,138	-		PGA1_c22740	0.23	-1.1
2,357,138	-		PGA1_c22740	0.23	-0.3
2,357,138	-		PGA1_c22740	0.23	+0.4
2,357,234	-		PGA1_c22740	0.27	+0.9
2,357,283	+		PGA1_c22740	0.30	+0.4
2,357,342	+		PGA1_c22740	0.33	-0.8
2,357,349	-		PGA1_c22740	0.33	-0.3
2,357,367	-		PGA1_c22740	0.34	+0.1
2,357,443	+		PGA1_c22740	0.37	-0.4
2,357,462	-		PGA1_c22740	0.38	-1.2
2,357,468	-		PGA1_c22740	0.38	-0.6
2,357,498	-		PGA1_c22740	0.40	-0.4
2,357,511	-		PGA1_c22740	0.40	-0.5
2,357,511	-		PGA1_c22740	0.40	+0.1
2,357,565	+		PGA1_c22740	0.43	+0.4
2,357,571	+		PGA1_c22740	0.43	-0.5
2,357,579	-		PGA1_c22740	0.44	-0.6
2,357,584	+		PGA1_c22740	0.44	+0.1
2,357,584	+		PGA1_c22740	0.44	-1.2
2,357,593	-		PGA1_c22740	0.44	+1.4
2,357,652	+		PGA1_c22740	0.47	-0.3
2,357,652	+		PGA1_c22740	0.47	-0.8