Experiment: Pyruvate-Sulfate (60-15mM) with Chromate 50uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF28911 and DVU0575 are separated by 304 nucleotides DVU0575 and msrB are separated by 228 nucleotides
DORF28911: DORF28911 - SEED: FIG00602256: hypothetical protein, at 639,220 to 639,978
DORF28911
DVU0575: DVU0575 - hypothetical protein (TIGR), at 640,283 to 640,564
DVU0575
DVU0576: msrB - peptide methionine sulfoxide reductase MsrB (TIGR), at 640,793 to 641,224
msrB
Position (kb) 640
641 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 639.383 kb on + strand, within DORF28911 at 639.388 kb on + strand, within DORF28911 at 639.398 kb on + strand, within DORF28911 at 639.497 kb on + strand, within DORF28911 at 639.604 kb on - strand, within DORF28911 at 639.642 kb on + strand, within DORF28911 at 639.792 kb on + strand, within DORF28911 at 639.915 kb on + strand at 639.915 kb on + strand at 640.156 kb on - strand at 640.257 kb on - strand at 640.312 kb on + strand, within DVU0575 at 640.340 kb on - strand, within DVU0575 at 640.350 kb on - strand, within DVU0575 at 640.361 kb on + strand, within DVU0575 at 640.400 kb on - strand, within DVU0575 at 640.417 kb on + strand, within DVU0575 at 640.541 kb on - strand at 640.541 kb on - strand at 640.641 kb on - strand at 640.642 kb on - strand at 640.690 kb on + strand at 640.748 kb on - strand at 640.784 kb on - strand at 640.817 kb on + strand at 640.897 kb on + strand, within msrB at 640.897 kb on + strand, within msrB at 640.905 kb on - strand, within msrB at 640.905 kb on - strand, within msrB at 641.021 kb on + strand, within msrB at 641.029 kb on - strand, within msrB at 641.030 kb on + strand, within msrB at 641.146 kb on + strand, within msrB at 641.162 kb on - strand, within msrB at 641.162 kb on - strand, within msrB at 641.162 kb on - strand, within msrB at 641.274 kb on + strand at 641.286 kb on + strand at 641.326 kb on + strand at 641.326 kb on + strand at 641.334 kb on - strand at 641.334 kb on - strand at 641.345 kb on - strand at 641.413 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Chromate 50uM remove 639,383 + DORF28911 0.21 +0.3 639,388 + DORF28911 0.22 -1.1 639,398 + DORF28911 0.23 -0.4 639,497 + DORF28911 0.36 -1.0 639,604 - DORF28911 0.51 +1.0 639,642 + DORF28911 0.56 -0.7 639,792 + DORF28911 0.75 -1.1 639,915 + -1.5 639,915 + -2.1 640,156 - -0.0 640,257 - +1.2 640,312 + DVU0575 0.10 -0.6 640,340 - DVU0575 0.20 -1.9 640,350 - DVU0575 0.24 +0.2 640,361 + DVU0575 0.28 +2.6 640,400 - DVU0575 0.41 -0.4 640,417 + DVU0575 0.48 -0.9 640,541 - -1.0 640,541 - +0.1 640,641 - -0.7 640,642 - -1.0 640,690 + +3.1 640,748 - -0.3 640,784 - +0.8 640,817 + +0.8 640,897 + msrB DVU0576 0.24 +0.2 640,897 + msrB DVU0576 0.24 +0.8 640,905 - msrB DVU0576 0.26 -0.8 640,905 - msrB DVU0576 0.26 -0.1 641,021 + msrB DVU0576 0.53 +1.6 641,029 - msrB DVU0576 0.55 -0.2 641,030 + msrB DVU0576 0.55 -1.6 641,146 + msrB DVU0576 0.82 +0.0 641,162 - msrB DVU0576 0.85 -1.4 641,162 - msrB DVU0576 0.85 -2.6 641,162 - msrB DVU0576 0.85 -0.2 641,274 + +0.2 641,286 + +0.1 641,326 + +1.1 641,326 + -0.5 641,334 - -0.4 641,334 - +1.2 641,345 - -0.6 641,413 - -0.2
Or see this region's nucleotide sequence