Strain Fitness in Pantoea sp. MT58 around IAI47_14855

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
3,132,541	+		IAI47_14850	0.25	-0.3
3,132,542	-		IAI47_14850	0.25	+1.1
3,132,542	-		IAI47_14850	0.25	-1.9
3,132,557	+		IAI47_14850	0.27	-1.3
3,132,557	+		IAI47_14850	0.27	-0.4
3,132,558	-		IAI47_14850	0.27	-0.2
3,132,558	-		IAI47_14850	0.27	-0.3
3,132,558	-		IAI47_14850	0.27	+1.0
3,132,558	-		IAI47_14850	0.27	-1.3
3,132,558	-		IAI47_14850	0.27	-1.1
3,132,558	-		IAI47_14850	0.27	-1.4
3,132,558	-		IAI47_14850	0.27	-2.1
3,132,620	+		IAI47_14850	0.31	-2.0
3,132,639	+		IAI47_14850	0.33	+0.1
3,132,639	+		IAI47_14850	0.33	-2.1
3,132,640	-		IAI47_14850	0.33	-2.2
3,132,764	+		IAI47_14850	0.42	-1.3
3,132,765	-		IAI47_14850	0.42	-1.7
3,132,847	+		IAI47_14850	0.49	-0.1
3,132,848	-		IAI47_14850	0.49	-1.5
3,132,872	+		IAI47_14850	0.51	-2.0
3,132,873	-		IAI47_14850	0.51	+1.4
3,132,873	-		IAI47_14850	0.51	-3.2
3,132,873	-		IAI47_14850	0.51	-1.2
3,132,876	+		IAI47_14850	0.51	-0.2
3,132,876	+		IAI47_14850	0.51	-0.3
3,132,876	+		IAI47_14850	0.51	-0.5
3,132,876	+		IAI47_14850	0.51	-0.8
3,132,877	-		IAI47_14850	0.51	-1.1
3,132,877	-		IAI47_14850	0.51	-0.2
3,132,877	-		IAI47_14850	0.51	-0.2
3,132,905	+		IAI47_14850	0.53	-2.3
3,133,057	+		IAI47_14850	0.65	-3.3
3,133,057	+		IAI47_14850	0.65	-1.7
3,133,058	-		IAI47_14850	0.65	-0.1
3,133,106	+		IAI47_14850	0.68	-1.7
3,133,106	+		IAI47_14850	0.68	+0.1
3,133,106	+		IAI47_14850	0.68	-1.7
3,133,106	+		IAI47_14850	0.68	-1.1
3,133,151	+		IAI47_14850	0.72	-0.5
3,133,163	+		IAI47_14850	0.73	-2.0
3,133,163	+		IAI47_14850	0.73	-2.4
3,133,164	-		IAI47_14850	0.73	+0.5
3,133,282	+		IAI47_14850	0.82	+1.3
3,133,282	+		IAI47_14850	0.82	-0.9
3,133,282	+		IAI47_14850	0.82	-2.3
3,133,283	-		IAI47_14850	0.82	-0.6
3,133,283	-		IAI47_14850	0.82	-2.6
3,133,283	-		IAI47_14850	0.82	-2.0
3,133,291	+		IAI47_14850	0.82	-1.0
3,133,291	+		IAI47_14850	0.82	-0.6
3,133,291	+		IAI47_14850	0.82	-0.6
3,133,291	+		IAI47_14850	0.82	-1.5
3,133,292	-		IAI47_14850	0.83	-0.1
3,133,292	-		IAI47_14850	0.83	+1.4
3,133,292	-		IAI47_14850	0.83	-2.1
3,133,389	+				+0.5
3,133,389	+				-0.3
3,133,492	-				+0.5
3,133,492	-				-0.1
3,133,492	-				-1.8
3,133,492	-				-0.5
3,133,523	+				-1.9
3,133,537	-				+0.3
3,133,580	+				+0.3
3,133,580	+				-1.3
3,133,580	+				-1.4
3,133,580	+				-2.9
3,133,580	+				-0.7
3,133,580	+				-2.1
3,133,581	-				-1.5
3,133,581	-				-1.3
3,133,581	-				-0.7
3,133,581	-				-2.0
3,133,616	-		IAI47_14855	0.12	-1.8
3,133,619	+		IAI47_14855	0.12	-0.9
3,133,620	-		IAI47_14855	0.12	-1.4
3,133,659	+		IAI47_14855	0.18	-1.4
3,133,659	+		IAI47_14855	0.18	-0.1
3,133,659	+		IAI47_14855	0.18	-0.9
3,133,659	+		IAI47_14855	0.18	-2.6
3,133,659	+		IAI47_14855	0.18	-2.4
3,133,659	+		IAI47_14855	0.18	-1.9
3,133,659	+		IAI47_14855	0.18	-1.9
3,133,659	+		IAI47_14855	0.18	-1.0
3,133,660	-		IAI47_14855	0.18	-1.5
3,133,660	-		IAI47_14855	0.18	+0.1
3,133,660	-		IAI47_14855	0.18	-0.5
3,133,660	-		IAI47_14855	0.18	-0.2
3,133,660	-		IAI47_14855	0.18	-2.4
3,133,704	+		IAI47_14855	0.24	-1.6
3,133,704	+		IAI47_14855	0.24	-2.4
3,133,705	-		IAI47_14855	0.25	-2.0
3,133,705	-		IAI47_14855	0.25	-1.2
3,133,705	-		IAI47_14855	0.25	-0.3
3,133,705	-		IAI47_14855	0.25	-1.0
3,133,705	-		IAI47_14855	0.25	-3.4
3,133,705	-		IAI47_14855	0.25	-2.2
3,133,705	-		IAI47_14855	0.25	-2.3
3,133,706	+		IAI47_14855	0.25	-0.9
3,133,706	+		IAI47_14855	0.25	-4.5
3,133,707	-		IAI47_14855	0.25	-2.1
3,133,707	-		IAI47_14855	0.25	-1.3
3,133,707	-		IAI47_14855	0.25	-1.1
3,133,726	+		IAI47_14855	0.28	-1.0
3,133,726	+		IAI47_14855	0.28	-1.7
3,133,726	+		IAI47_14855	0.28	-0.6
3,133,727	-		IAI47_14855	0.28	-1.3
3,133,727	-		IAI47_14855	0.28	-1.8
3,133,727	-		IAI47_14855	0.28	-2.6
3,133,744	+		IAI47_14855	0.30	-2.3
3,133,744	+		IAI47_14855	0.30	-2.8
3,133,744	+		IAI47_14855	0.30	-3.1
3,133,744	+		IAI47_14855	0.30	-2.8
3,133,745	-		IAI47_14855	0.30	-1.2
3,133,745	-		IAI47_14855	0.30	-1.3
3,133,745	-		IAI47_14855	0.30	-0.9
3,133,745	-		IAI47_14855	0.30	-0.5
3,133,745	-		IAI47_14855	0.30	-2.1
3,133,746	+		IAI47_14855	0.31	-2.1
3,133,746	+		IAI47_14855	0.31	-2.6
3,133,746	+		IAI47_14855	0.31	-1.7
3,133,746	+		IAI47_14855	0.31	-1.0
3,133,858	+		IAI47_14855	0.47	-1.9
3,133,858	+		IAI47_14855	0.47	-1.6
3,133,859	-		IAI47_14855	0.47	-0.8
3,133,859	-		IAI47_14855	0.47	-3.4
3,133,877	-		IAI47_14855	0.50	-0.3
3,133,877	-		IAI47_14855	0.50	-3.2
3,133,915	+		IAI47_14855	0.55	-1.0
3,133,915	+		IAI47_14855	0.55	-1.9
3,133,915	+		IAI47_14855	0.55	-0.8
3,133,915	+		IAI47_14855	0.55	-2.2
3,133,916	-		IAI47_14855	0.55	-1.5
3,133,916	-		IAI47_14855	0.55	-2.7
3,133,916	-		IAI47_14855	0.55	+0.8
3,133,920	+		IAI47_14855	0.56	-0.2
3,133,920	+		IAI47_14855	0.56	-2.9
3,133,920	+		IAI47_14855	0.56	-1.8
3,133,921	-		IAI47_14855	0.56	-2.7
3,133,921	-		IAI47_14855	0.56	+0.5
3,133,921	-		IAI47_14855	0.56	-1.8
3,134,033	-		IAI47_14855	0.72	-3.3
3,134,041	+		IAI47_14855	0.73	-0.9
3,134,057	+		IAI47_14855	0.76	-0.3
3,134,057	+		IAI47_14855	0.76	+0.2
3,134,057	+		IAI47_14855	0.76	-3.0
3,134,058	-		IAI47_14855	0.76	-1.9
3,134,058	-		IAI47_14855	0.76	-2.0
3,134,058	-		IAI47_14855	0.76	-1.0
3,134,058	-		IAI47_14855	0.76	-0.9
3,134,121	+		IAI47_14855	0.85	-1.7
3,134,121	+		IAI47_14855	0.85	-1.0
3,134,122	-		IAI47_14855	0.85	+1.1
3,134,122	-		IAI47_14855	0.85	-0.0
3,134,122	-		IAI47_14855	0.85	-0.7
3,134,122	-		IAI47_14855	0.85	-0.8
3,134,122	-		IAI47_14855	0.85	-1.9
3,134,145	+		IAI47_14855	0.88	-2.6
3,134,146	-		IAI47_14855	0.89	-0.3
3,134,146	-		IAI47_14855	0.89	-1.6
3,134,146	-		IAI47_14855	0.89	-1.3
3,134,146	-		IAI47_14855	0.89	+0.3
3,134,218	+				-1.8
3,134,218	+				-1.7
3,134,218	+				-2.8
3,134,219	-				-1.9
3,134,225	+				-1.7
3,134,225	+				-1.0
3,134,226	-				-1.6
3,134,228	+				-1.7
3,134,228	+				-0.9
3,134,228	+				-0.4
3,134,228	+				-0.8
3,134,229	-				-2.9
3,134,229	-				-2.5
3,134,229	-				-0.5
3,134,229	-				+0.1
3,134,229	-				-2.2
3,134,229	-				+0.1
3,134,241	+				-0.5
3,134,241	+				-0.0
3,134,241	+				+0.3
3,134,241	+				-0.5
3,134,241	+				-1.9
3,134,241	+				-0.2
3,134,242	-				-0.2
3,134,242	-				-0.3
3,134,242	-				-0.1
3,134,242	-				-0.6
3,134,274	+				-0.3
3,134,274	+				-0.9
3,134,274	+				-0.1
3,134,274	+				-0.5
3,134,274	+				-2.0
3,134,275	-				-0.5
3,134,275	-				-0.7
3,134,298	+				-0.8
3,134,299	-				+0.1
3,134,309	+				+0.8
3,134,309	+				-0.2
3,134,321	-				+0.5
3,134,340	+				+0.4
3,134,340	+				+0.5
3,134,341	-				-1.1
3,134,341	-				+0.7
3,134,341	-				+0.1
3,134,341	-				+0.6
3,134,384	+				+0.5
3,134,384	+				-0.4
3,134,384	+				+0.3
3,134,385	-				+1.2
3,134,385	-				-0.8
3,134,386	+				-0.0
3,134,387	-				+1.2
3,134,387	-				+0.5
3,134,436	+				-1.8
3,134,436	+				+0.5
3,134,437	-				+0.4
3,134,467	+				-1.1
3,134,467	+				+1.5
3,134,553	+		IAI47_14860	0.11	+0.3
3,134,553	+		IAI47_14860	0.11	+0.0
3,134,554	-		IAI47_14860	0.11	+1.1
3,134,554	-		IAI47_14860	0.11	-0.2
3,134,554	-		IAI47_14860	0.11	+0.3
3,134,593	+		IAI47_14860	0.14	-0.5
3,134,593	+		IAI47_14860	0.14	-1.7
3,134,594	-		IAI47_14860	0.14	-0.2
3,134,594	-		IAI47_14860	0.14	+0.1
3,134,796	+		IAI47_14860	0.31	+2.3
3,134,796	+		IAI47_14860	0.31	-0.4
3,134,797	-		IAI47_14860	0.31	+2.0
3,134,797	-		IAI47_14860	0.31	-1.3
3,134,797	-		IAI47_14860	0.31	-0.9
3,134,818	+		IAI47_14860	0.33	+1.6
3,134,818	+		IAI47_14860	0.33	+0.1
3,134,835	+		IAI47_14860	0.34	-1.4
3,134,908	+		IAI47_14860	0.41	+0.1
3,134,909	-		IAI47_14860	0.41	+1.1
3,135,019	+		IAI47_14860	0.50	+0.1
3,135,019	+		IAI47_14860	0.50	-0.2
3,135,019	+		IAI47_14860	0.50	+0.3
3,135,019	+		IAI47_14860	0.50	+0.8
3,135,019	+		IAI47_14860	0.50	-1.0
3,135,019	+		IAI47_14860	0.50	-0.9
3,135,019	+		IAI47_14860	0.50	+0.9
3,135,020	-		IAI47_14860	0.50	+0.1
3,135,020	-		IAI47_14860	0.50	+0.7
3,135,020	-		IAI47_14860	0.50	+0.2
3,135,020	-		IAI47_14860	0.50	-1.9
3,135,020	-		IAI47_14860	0.50	-0.6
3,135,020	-		IAI47_14860	0.50	+0.0
3,135,070	+		IAI47_14860	0.54	+0.8
3,135,071	-		IAI47_14860	0.54	-0.1
3,135,071	-		IAI47_14860	0.54	+1.2
3,135,071	-		IAI47_14860	0.54	+2.2
3,135,071	-		IAI47_14860	0.54	-0.6
3,135,071	-		IAI47_14860	0.54	-0.2
3,135,071	-		IAI47_14860	0.54	-1.1
3,135,088	-		IAI47_14860	0.56	-0.3
3,135,088	-		IAI47_14860	0.56	-0.3
3,135,123	+		IAI47_14860	0.58	+1.6
3,135,123	+		IAI47_14860	0.58	-2.2
3,135,123	+		IAI47_14860	0.58	+1.9
3,135,124	-		IAI47_14860	0.58	-0.8
3,135,132	+		IAI47_14860	0.59	-0.5
3,135,133	-		IAI47_14860	0.59	+0.3
3,135,133	-		IAI47_14860	0.59	-0.0
3,135,133	-		IAI47_14860	0.59	+0.1