Strain Fitness in Pantoea sp. MT58 around IAI47_09210

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
1,939,581	+		IAI47_09205	0.69	+0.7
1,939,582	-		IAI47_09205	0.69	+1.5
1,939,605	+		IAI47_09205	0.73	+0.6
1,939,605	+		IAI47_09205	0.73	-0.1
1,939,606	-		IAI47_09205	0.73	+1.9
1,939,607	+		IAI47_09205	0.73	+0.2
1,939,608	-		IAI47_09205	0.73	+0.6
1,939,608	-		IAI47_09205	0.73	+0.4
1,939,608	-		IAI47_09205	0.73	+0.8
1,939,624	+		IAI47_09205	0.75	+1.0
1,939,624	+		IAI47_09205	0.75	+0.5
1,939,624	+		IAI47_09205	0.75	-0.2
1,939,624	+		IAI47_09205	0.75	+2.8
1,939,624	+		IAI47_09205	0.75	+1.5
1,939,625	-		IAI47_09205	0.76	+2.2
1,939,625	-		IAI47_09205	0.76	+0.3
1,939,625	-		IAI47_09205	0.76	+0.8
1,939,625	-		IAI47_09205	0.76	+0.7
1,939,680	+		IAI47_09205	0.84	+1.1
1,939,680	+		IAI47_09205	0.84	+1.3
1,939,681	-		IAI47_09205	0.84	+0.6
1,939,681	-		IAI47_09205	0.84	+0.8
1,939,681	-		IAI47_09205	0.84	+1.2
1,939,681	-		IAI47_09205	0.84	+1.8
1,939,684	+		IAI47_09205	0.85	+1.7
1,939,684	+		IAI47_09205	0.85	+1.0
1,939,684	+		IAI47_09205	0.85	-1.3
1,939,684	+		IAI47_09205	0.85	+1.8
1,939,684	+		IAI47_09205	0.85	+1.2
1,939,685	-		IAI47_09205	0.85	+0.8
1,939,685	-		IAI47_09205	0.85	+1.2
1,939,685	-		IAI47_09205	0.85	-0.2
1,939,685	-		IAI47_09205	0.85	+1.7
1,939,709	+		IAI47_09205	0.89	+0.0
1,939,709	+		IAI47_09205	0.89	+1.8
1,939,710	-		IAI47_09205	0.89	+1.6
1,939,710	-		IAI47_09205	0.89	+0.9
1,939,716	+		IAI47_09205	0.90	+0.8
1,939,717	-		IAI47_09205	0.90	+1.1
1,939,782	+				+0.9
1,939,783	-				+1.0
1,939,864	-				-1.8
1,939,864	-				+1.4
1,939,864	-				-0.6
1,939,867	-				+0.2
1,939,903	-				+0.4
1,939,907	-				-0.9
1,939,923	-				+0.6
1,939,926	-				-2.1
1,939,930	+				+1.8
1,939,931	-				+0.4
1,939,931	-				-0.1
1,939,931	-				+0.4
1,939,931	-				-0.2
1,939,967	+				+1.6
1,939,967	+				+0.2
1,939,989	-				-0.4
1,940,006	-				+0.7
1,940,012	-				-0.5
1,940,012	-				+0.3
1,940,022	+				-0.1
1,940,073	-				+0.1
1,940,085	-				+0.6
1,940,117	+				+0.0
1,940,142	-				-1.8
1,940,142	-				+0.0
1,940,163	+				+1.7
1,940,169	-				+0.8
1,940,222	+				-1.5
1,940,223	-				+0.9
1,940,223	-				+1.0
1,940,223	-				-0.8
1,940,223	-				-1.2
1,940,227	+				-0.6
1,940,228	-				-2.2
1,940,228	-				+0.0
1,940,228	-				-0.2
1,940,228	-				-1.5
1,940,242	+				-1.2
1,940,289	-				+0.2
1,940,292	+				+0.7
1,940,302	+				+0.2
1,940,303	-				-0.7
1,940,303	-				-0.0
1,940,327	+				-0.2
1,940,327	+				-0.9
1,940,337	-				+0.6
1,940,337	-				+0.3
1,940,372	+				+0.8
1,940,385	-				+0.7
1,940,415	-				+0.3
1,940,417	+				+1.2
1,940,418	-				+0.2
1,940,420	+				+1.0
1,940,421	-				+2.1
1,940,440	-				+0.4
1,940,440	-				+0.3
1,940,450	-				-1.9
1,940,471	-				-1.0
1,940,486	+				-1.2
1,940,633	+				-0.6
1,940,776	+		IAI47_09210	0.24	-2.0
1,940,776	+		IAI47_09210	0.24	-0.2
1,940,777	-		IAI47_09210	0.24	-1.4
1,940,779	+		IAI47_09210	0.24	-1.9
1,940,779	+		IAI47_09210	0.24	+1.0
1,940,779	+		IAI47_09210	0.24	-0.8
1,940,780	-		IAI47_09210	0.24	+0.5
1,940,980	+		IAI47_09210	0.47	+0.2
1,940,980	+		IAI47_09210	0.47	+1.0
1,940,981	-		IAI47_09210	0.47	+0.3
1,941,015	+		IAI47_09210	0.51	+0.8
1,941,033	+		IAI47_09210	0.53	+1.0
1,941,033	+		IAI47_09210	0.53	-0.8
1,941,034	-		IAI47_09210	0.53	-0.6
1,941,034	-		IAI47_09210	0.53	-0.5
1,941,112	+		IAI47_09210	0.62	-0.5
1,941,112	+		IAI47_09210	0.62	+0.0
1,941,112	+		IAI47_09210	0.62	-1.6
1,941,112	+		IAI47_09210	0.62	-0.6
1,941,112	+		IAI47_09210	0.62	+0.3
1,941,113	-		IAI47_09210	0.62	-0.1
1,941,114	+		IAI47_09210	0.62	-1.8
1,941,114	+		IAI47_09210	0.62	-0.6
1,941,115	-		IAI47_09210	0.62	+0.6
1,941,115	-		IAI47_09210	0.62	-0.4
1,941,138	+		IAI47_09210	0.65	-1.1
1,941,138	+		IAI47_09210	0.65	+0.6
1,941,139	-		IAI47_09210	0.65	+1.8
1,941,149	+		IAI47_09210	0.66	+0.8
1,941,150	-		IAI47_09210	0.66	+0.0
1,941,150	-		IAI47_09210	0.66	+0.0
1,941,222	-		IAI47_09210	0.74	-0.5
1,941,277	+		IAI47_09210	0.80	-0.4
1,941,278	-		IAI47_09210	0.80	-1.9
1,941,278	-		IAI47_09210	0.80	+0.4
1,941,278	-		IAI47_09210	0.80	+0.6
1,941,285	+		IAI47_09210	0.81	+0.9
1,941,318	+		IAI47_09210	0.85	+1.4
1,941,318	+		IAI47_09210	0.85	-2.3
1,941,318	+		IAI47_09210	0.85	+0.1
1,941,348	+		IAI47_09210	0.88	-0.2
1,941,348	+		IAI47_09210	0.88	-0.4
1,941,349	-		IAI47_09210	0.88	+0.5
1,941,390	+				+1.8
1,941,390	+				-0.2
1,941,390	+				-0.1
1,941,390	+				+0.1
1,941,391	-				+0.7
1,941,441	+				-1.4
1,941,441	+				+1.7
1,941,441	+				+0.5
1,941,442	-				+0.6
1,941,442	-				+0.1
1,941,451	+				-1.2
1,941,454	+				+1.2
1,941,454	+				+0.8
1,941,454	+				+1.8
1,941,454	+				-0.6
1,941,454	+				-0.1
1,941,455	-				+0.6
1,941,455	-				-0.2
1,941,535	+				-0.0
1,941,535	+				-0.6
1,941,536	-				+0.7
1,941,536	-				-1.1
1,941,536	-				-0.3
1,941,536	-				-0.5
1,941,538	-				+1.0
1,941,538	-				-0.9
1,941,582	+		IAI47_09215	0.13	-0.1
1,941,582	+		IAI47_09215	0.13	-0.9
1,941,582	+		IAI47_09215	0.13	+0.2
1,941,583	-		IAI47_09215	0.13	+1.0
1,941,583	-		IAI47_09215	0.13	+0.8
1,941,627	+		IAI47_09215	0.20	-0.5
1,941,627	+		IAI47_09215	0.20	+2.1
1,941,689	+		IAI47_09215	0.31	+0.0
1,941,689	+		IAI47_09215	0.31	-0.7
1,941,689	+		IAI47_09215	0.31	+0.8
1,941,690	-		IAI47_09215	0.31	-0.7
1,941,705	+		IAI47_09215	0.33	+0.2
1,941,705	+		IAI47_09215	0.33	+2.0
1,941,705	+		IAI47_09215	0.33	+0.2
1,941,705	+		IAI47_09215	0.33	+0.4
1,941,705	+		IAI47_09215	0.33	+0.0
1,941,706	-		IAI47_09215	0.34	+1.3
1,941,706	-		IAI47_09215	0.34	+0.2
1,941,706	-		IAI47_09215	0.34	-0.8
1,941,706	-		IAI47_09215	0.34	+1.2
1,941,706	-		IAI47_09215	0.34	-0.9
1,941,707	+		IAI47_09215	0.34	+0.2
1,941,707	+		IAI47_09215	0.34	+0.6
1,941,707	+		IAI47_09215	0.34	-0.6
1,941,707	+		IAI47_09215	0.34	-1.2
1,941,707	+		IAI47_09215	0.34	+1.0
1,941,707	+		IAI47_09215	0.34	+0.0
1,941,707	+		IAI47_09215	0.34	-1.8
1,941,707	+		IAI47_09215	0.34	+0.6
1,941,707	+		IAI47_09215	0.34	+0.4
1,941,707	+		IAI47_09215	0.34	+1.6
1,941,708	-		IAI47_09215	0.34	-1.9
1,941,708	-		IAI47_09215	0.34	-0.2
1,941,708	-		IAI47_09215	0.34	+3.3
1,941,708	-		IAI47_09215	0.34	+0.2
1,941,708	-		IAI47_09215	0.34	-0.2
1,941,708	-		IAI47_09215	0.34	-1.0
1,941,708	-		IAI47_09215	0.34	+0.5
1,941,708	-		IAI47_09215	0.34	-0.2
1,941,825	+		IAI47_09215	0.54	+0.8
1,941,825	+		IAI47_09215	0.54	-1.1
1,941,903	+		IAI47_09215	0.67	+0.4
1,941,906	+		IAI47_09215	0.67	+0.0
1,941,906	+		IAI47_09215	0.67	-0.2
1,942,060	+				-0.1
1,942,060	+				+0.2
1,942,061	-				+1.5
1,942,181	-		IAI47_09220	0.11	+0.9
1,942,181	-		IAI47_09220	0.11	-0.0
1,942,186	+		IAI47_09220	0.12	-1.0
1,942,186	+		IAI47_09220	0.12	+0.6
1,942,186	+		IAI47_09220	0.12	+0.6
1,942,187	-		IAI47_09220	0.12	+0.8
1,942,220	+		IAI47_09220	0.16	+0.0
1,942,220	+		IAI47_09220	0.16	+0.0
1,942,221	-		IAI47_09220	0.16	-1.1
1,942,221	-		IAI47_09220	0.16	+0.2
1,942,221	-		IAI47_09220	0.16	+1.2
1,942,221	-		IAI47_09220	0.16	+1.1
1,942,221	-		IAI47_09220	0.16	+1.2
1,942,221	-		IAI47_09220	0.16	+0.8
1,942,221	-		IAI47_09220	0.16	+0.4
1,942,223	+		IAI47_09220	0.16	-0.6
1,942,223	+		IAI47_09220	0.16	-0.4
1,942,223	+		IAI47_09220	0.16	-1.7
1,942,223	+		IAI47_09220	0.16	-1.4
1,942,223	+		IAI47_09220	0.16	-0.5
1,942,223	+		IAI47_09220	0.16	+0.1
1,942,223	+		IAI47_09220	0.16	-0.8
1,942,223	+		IAI47_09220	0.16	-0.2
1,942,223	+		IAI47_09220	0.16	+0.4
1,942,223	+		IAI47_09220	0.16	+0.2
1,942,224	-		IAI47_09220	0.17	-2.4
1,942,224	-		IAI47_09220	0.17	-0.2
1,942,224	-		IAI47_09220	0.17	+0.9
1,942,224	-		IAI47_09220	0.17	+0.5
1,942,224	-		IAI47_09220	0.17	+1.2
1,942,284	-		IAI47_09220	0.24	+0.7
1,942,310	+		IAI47_09220	0.28	-1.3
1,942,310	+		IAI47_09220	0.28	-0.9
1,942,310	+		IAI47_09220	0.28	+0.2
1,942,310	+		IAI47_09220	0.28	+0.5
1,942,311	-		IAI47_09220	0.28	+0.2
1,942,311	-		IAI47_09220	0.28	+1.2
1,942,311	-		IAI47_09220	0.28	+0.6
1,942,311	-		IAI47_09220	0.28	+0.3
1,942,311	-		IAI47_09220	0.28	+0.4
1,942,311	-		IAI47_09220	0.28	+0.0
1,942,312	+		IAI47_09220	0.28	+0.9
1,942,312	+		IAI47_09220	0.28	-0.3
1,942,312	+		IAI47_09220	0.28	-0.1
1,942,312	+		IAI47_09220	0.28	-1.8
1,942,312	+		IAI47_09220	0.28	-1.3
1,942,313	-		IAI47_09220	0.28	+0.5
1,942,313	-				+2.8
1,942,313	-		IAI47_09220	0.28	+1.1
1,942,366	+		IAI47_09220	0.35	-2.2
1,942,413	-		IAI47_09220	0.41	+0.9