Strain Fitness in Pantoea sp. MT58 around IAI47_07210

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
1,522,297	+		IAI47_07205	0.38	+2.8
1,522,374	+		IAI47_07205	0.45	+0.1
1,522,375	-		IAI47_07205	0.45	+2.0
1,522,387	+		IAI47_07205	0.46	+0.9
1,522,511	+		IAI47_07205	0.57	-0.2
1,522,511	+		IAI47_07205	0.57	-0.5
1,522,511	+		IAI47_07205	0.57	+1.4
1,522,512	-		IAI47_07205	0.57	-0.1
1,522,512	-		IAI47_07205	0.57	-1.2
1,522,567	+		IAI47_07205	0.62	+1.3
1,522,567	+		IAI47_07205	0.62	+1.7
1,522,568	-		IAI47_07205	0.62	+0.8
1,522,642	+		IAI47_07205	0.69	+0.0
1,522,642	+		IAI47_07205	0.69	-0.2
1,522,642	+		IAI47_07205	0.69	-1.5
1,522,643	-		IAI47_07205	0.69	+0.6
1,522,643	-		IAI47_07205	0.69	-0.1
1,522,643	-		IAI47_07205	0.69	+0.7
1,522,643	-		IAI47_07205	0.69	+1.4
1,522,643	-		IAI47_07205	0.69	+0.4
1,522,654	+		IAI47_07205	0.70	+2.3
1,522,654	+		IAI47_07205	0.70	-0.5
1,522,655	-		IAI47_07205	0.70	-0.6
1,522,655	-		IAI47_07205	0.70	+0.4
1,522,655	-		IAI47_07205	0.70	+0.3
1,522,655	-		IAI47_07205	0.70	-0.2
1,522,655	-		IAI47_07205	0.70	-0.4
1,522,655	-		IAI47_07205	0.70	-0.0
1,522,655	-		IAI47_07205	0.70	+0.2
1,522,655	-		IAI47_07205	0.70	+0.4
1,522,695	+		IAI47_07205	0.74	+0.1
1,522,696	-		IAI47_07205	0.74	+0.7
1,522,719	+		IAI47_07205	0.76	+0.1
1,522,719	+		IAI47_07205	0.76	+0.8
1,522,719	+		IAI47_07205	0.76	-0.9
1,522,720	-		IAI47_07205	0.76	-0.6
1,522,720	-		IAI47_07205	0.76	+0.1
1,522,762	+		IAI47_07205	0.80	-0.9
1,522,762	+		IAI47_07205	0.80	+0.7
1,522,762	+		IAI47_07205	0.80	-0.5
1,522,762	+		IAI47_07205	0.80	+0.2
1,522,762	+		IAI47_07205	0.80	-0.3
1,522,762	+		IAI47_07205	0.80	-0.2
1,522,763	-		IAI47_07205	0.80	+1.4
1,522,763	-		IAI47_07205	0.80	+0.5
1,522,763	-		IAI47_07205	0.80	-1.3
1,522,763	-		IAI47_07205	0.80	+0.6
1,522,763	-		IAI47_07205	0.80	-2.0
1,522,763	-		IAI47_07205	0.80	-0.0
1,522,797	+		IAI47_07205	0.83	+0.0
1,522,797	+		IAI47_07205	0.83	+0.1
1,522,797	+		IAI47_07205	0.83	-0.7
1,522,798	-		IAI47_07205	0.83	+0.3
1,522,798	-		IAI47_07205	0.83	+1.8
1,522,818	+		IAI47_07205	0.85	-0.4
1,522,819	-		IAI47_07205	0.85	+0.3
1,522,819	-		IAI47_07205	0.85	-1.8
1,522,819	-		IAI47_07205	0.85	+1.2
1,522,819	-		IAI47_07205	0.85	-0.4
1,522,994	+				-0.9
1,522,994	+				+1.2
1,522,995	-				+0.2
1,523,132	+				+1.2
1,523,132	+				+0.3
1,523,132	+				-0.9
1,523,133	-				+0.8
1,523,133	-				+0.5
1,523,133	-				-0.7
1,523,133	-				-1.0
1,523,220	+				+0.0
1,523,220	+				-1.0
1,523,221	-				-0.1
1,523,221	-				+0.1
1,523,221	-				-0.1
1,523,238	+				+0.9
1,523,238	+				+0.3
1,523,238	+				-0.5
1,523,238	+				+2.1
1,523,238	+				-0.4
1,523,239	-				-2.0
1,523,240	+				-0.4
1,523,241	-				-0.8
1,523,241	-				-0.8
1,523,241	-				+1.7
1,523,241	-				-0.3
1,523,327	+		IAI47_07210	0.11	+1.1
1,523,327	+		IAI47_07210	0.11	-0.3
1,523,327	+		IAI47_07210	0.11	-0.1
1,523,328	-		IAI47_07210	0.11	+0.4
1,523,328	-		IAI47_07210	0.11	-0.4
1,523,519	+		IAI47_07210	0.18	+0.7
1,523,519	+		IAI47_07210	0.18	-0.8
1,523,519	+		IAI47_07210	0.18	-0.7
1,523,520	-		IAI47_07210	0.18	-2.2
1,523,520	-		IAI47_07210	0.18	-0.6
1,523,520	-		IAI47_07210	0.18	+0.5
1,523,547	+		IAI47_07210	0.18	-0.2
1,523,547	+		IAI47_07210	0.18	+0.6
1,523,547	+		IAI47_07210	0.18	-0.3
1,523,547	+		IAI47_07210	0.18	+0.7
1,523,547	+		IAI47_07210	0.18	+0.0
1,523,547	+		IAI47_07210	0.18	+0.1
1,523,547	+		IAI47_07210	0.18	-0.5
1,523,548	-		IAI47_07210	0.18	-0.9
1,523,548	-		IAI47_07210	0.18	+0.1
1,523,548	-		IAI47_07210	0.18	-2.1
1,523,548	-		IAI47_07210	0.18	-1.3
1,523,548	-		IAI47_07210	0.18	+0.6
1,523,548	-		IAI47_07210	0.18	+0.6
1,523,585	+		IAI47_07210	0.20	-0.6
1,523,589	-		IAI47_07210	0.20	+0.3
1,523,589	-		IAI47_07210	0.20	-2.4
1,523,654	+		IAI47_07210	0.22	-0.0
1,523,654	+		IAI47_07210	0.22	+1.1
1,523,700	-		IAI47_07210	0.23	+0.9
1,523,804	+		IAI47_07210	0.27	-1.7
1,523,804	+		IAI47_07210	0.27	-0.5
1,523,805	-		IAI47_07210	0.27	+0.2
1,523,805	-		IAI47_07210	0.27	-0.7
1,523,843	+		IAI47_07210	0.28	-0.2
1,523,844	-		IAI47_07210	0.28	-0.9
1,523,844	-		IAI47_07210	0.28	+0.5
1,523,912	+		IAI47_07210	0.30	+1.3
1,523,993	+		IAI47_07210	0.33	+0.1
1,523,993	+		IAI47_07210	0.33	+0.0
1,523,993	+		IAI47_07210	0.33	+1.2
1,523,994	-		IAI47_07210	0.33	-2.0
1,523,994	-		IAI47_07210	0.33	-0.6
1,523,999	+		IAI47_07210	0.33	-0.7
1,523,999	+		IAI47_07210	0.33	+1.3
1,524,000	-		IAI47_07210	0.33	-2.4
1,524,000	-		IAI47_07210	0.33	-0.4
1,524,000	-		IAI47_07210	0.33	+0.8
1,524,000	-		IAI47_07210	0.33	+0.7
1,524,000	-		IAI47_07210	0.33	-2.3
1,524,000	-		IAI47_07210	0.33	+0.8
1,524,067	+		IAI47_07210	0.35	+0.8
1,524,067	+		IAI47_07210	0.35	+2.0
1,524,104	-		IAI47_07210	0.36	-0.7
1,524,106	+		IAI47_07210	0.36	-0.7
1,524,106	+		IAI47_07210	0.36	+0.5
1,524,106	+		IAI47_07210	0.36	+0.5
1,524,106	+		IAI47_07210	0.36	+0.2
1,524,106	+		IAI47_07210	0.36	-0.6
1,524,107	-		IAI47_07210	0.36	-0.9
1,524,107	-		IAI47_07210	0.36	+0.3
1,524,107	-		IAI47_07210	0.36	-0.1
1,524,107	-		IAI47_07210	0.36	-0.4
1,524,200	+		IAI47_07210	0.40	-0.5
1,524,200	+				+1.8
1,524,240	+		IAI47_07210	0.41	-0.1
1,524,264	+		IAI47_07210	0.42	-0.7
1,524,264	+		IAI47_07210	0.42	+1.2
1,524,265	-		IAI47_07210	0.42	-1.4
1,524,265	-		IAI47_07210	0.42	+2.0
1,524,265	-		IAI47_07210	0.42	+0.5
1,524,265	-		IAI47_07210	0.42	-1.2
1,524,278	+		IAI47_07210	0.42	-1.2
1,524,363	+		IAI47_07210	0.45	+1.5
1,524,363	+		IAI47_07210	0.45	-0.4
1,524,363	+		IAI47_07210	0.45	-1.0
1,524,363	+		IAI47_07210	0.45	-1.8
1,524,363	+		IAI47_07210	0.45	-0.2
1,524,364	-		IAI47_07210	0.45	+0.6
1,524,364	-		IAI47_07210	0.45	+1.0
1,524,364	-		IAI47_07210	0.45	-1.4
1,524,374	+		IAI47_07210	0.45	+1.6
1,524,374	+		IAI47_07210	0.45	+0.0
1,524,374	+		IAI47_07210	0.45	-0.4
1,524,374	+		IAI47_07210	0.45	-0.5
1,524,374	+		IAI47_07210	0.45	-2.0
1,524,374	+		IAI47_07210	0.45	+0.1
1,524,374	+		IAI47_07210	0.45	+0.3
1,524,375	-		IAI47_07210	0.45	-0.2
1,524,375	-		IAI47_07210	0.45	-0.5
1,524,375	-		IAI47_07210	0.45	+0.2
1,524,375	-		IAI47_07210	0.45	-1.2
1,524,375	-		IAI47_07210	0.45	-1.0
1,524,375	-		IAI47_07210	0.45	-0.7
1,524,375	-		IAI47_07210	0.45	+0.0
1,524,375	-		IAI47_07210	0.45	-0.4
1,524,375	-		IAI47_07210	0.45	+1.4
1,524,427	+		IAI47_07210	0.47	+1.0
1,524,427	+		IAI47_07210	0.47	+0.4
1,524,428	-		IAI47_07210	0.47	+0.3
1,524,428	-		IAI47_07210	0.47	+1.7
1,524,428	-		IAI47_07210	0.47	-0.9
1,524,428	-		IAI47_07210	0.47	-0.3
1,524,431	+		IAI47_07210	0.47	-0.2
1,524,431	+		IAI47_07210	0.47	-0.1
1,524,431	+		IAI47_07210	0.47	+0.6
1,524,432	-		IAI47_07210	0.47	+1.1
1,524,432	-		IAI47_07210	0.47	-0.1
1,524,438	+		IAI47_07210	0.47	-0.5
1,524,438	+		IAI47_07210	0.47	+1.0
1,524,498	+		IAI47_07210	0.49	+1.5
1,524,498	+		IAI47_07210	0.49	-0.3
1,524,498	+		IAI47_07210	0.49	-1.4
1,524,499	-		IAI47_07210	0.49	+0.3
1,524,499	-		IAI47_07210	0.49	-1.0
1,524,499	-		IAI47_07210	0.49	-1.9
1,524,499	-		IAI47_07210	0.49	+0.8
1,524,499	-		IAI47_07210	0.49	-0.4
1,524,499	-		IAI47_07210	0.49	-0.0
1,524,509	+		IAI47_07210	0.49	+0.8
1,524,513	+		IAI47_07210	0.50	-0.5
1,524,513	+		IAI47_07210	0.50	+0.7
1,524,514	-		IAI47_07210	0.50	-1.1
1,524,514	-		IAI47_07210	0.50	-0.3
1,524,533	-		IAI47_07210	0.50	+0.3
1,524,533	-		IAI47_07210	0.50	+1.1
1,524,533	-		IAI47_07210	0.50	+0.2
1,524,555	-		IAI47_07210	0.51	-1.1
1,524,590	+		IAI47_07210	0.52	+0.2
1,524,591	-		IAI47_07210	0.52	+1.3
1,524,591	-		IAI47_07210	0.52	+1.0
1,524,738	-		IAI47_07210	0.57	-0.5
1,524,771	+		IAI47_07210	0.58	+1.7
1,524,771	+		IAI47_07210	0.58	-0.6
1,524,771	+		IAI47_07210	0.58	-0.3
1,524,771	+		IAI47_07210	0.58	+2.5
1,524,771	+		IAI47_07210	0.58	-0.8
1,524,772	+		IAI47_07210	0.58	+1.2
1,524,772	-		IAI47_07210	0.58	+1.3
1,524,772	-		IAI47_07210	0.58	+1.2
1,524,772	-		IAI47_07210	0.58	-0.5
1,524,772	-		IAI47_07210	0.58	-0.2
1,524,772	-		IAI47_07210	0.58	+1.3
1,524,850	+		IAI47_07210	0.60	+0.6
1,524,850	+		IAI47_07210	0.60	+0.5
1,524,851	-		IAI47_07210	0.61	+0.6
1,524,884	-		IAI47_07210	0.62	+0.2
1,524,955	+		IAI47_07210	0.64	+1.0
1,524,956	-		IAI47_07210	0.64	+1.8
1,524,967	-		IAI47_07210	0.64	+2.8
1,524,967	-		IAI47_07210	0.64	-0.5
1,524,967	-		IAI47_07210	0.64	-0.7
1,524,967	-		IAI47_07210	0.64	-0.2
1,524,976	-		IAI47_07210	0.65	+0.9
1,525,226	+		IAI47_07210	0.73	+0.0
1,525,325	+		IAI47_07210	0.76	-0.5
1,525,326	-		IAI47_07210	0.76	-0.2
1,525,403	+		IAI47_07210	0.78	+0.7
1,525,403	+		IAI47_07210	0.78	+0.1
1,525,404	-		IAI47_07210	0.78	+0.7
1,525,407	-		IAI47_07210	0.78	-0.4
1,525,407	-		IAI47_07210	0.78	+0.4
1,525,467	-		IAI47_07210	0.80	-0.0
1,525,467	-		IAI47_07210	0.80	+0.5
1,525,531	+		IAI47_07210	0.82	+0.4
1,525,601	-		IAI47_07210	0.85	-1.3
1,525,645	+		IAI47_07210	0.86	-0.2
1,525,645	+		IAI47_07210	0.86	+1.5
1,525,645	+		IAI47_07210	0.86	+1.0
1,525,646	-		IAI47_07210	0.86	-0.2
1,525,646	-		IAI47_07210	0.86	+0.5
1,525,672	+		IAI47_07210	0.87	+1.3
1,525,672	+		IAI47_07210	0.87	+1.3
1,525,672	+		IAI47_07210	0.87	+1.0
1,525,672	+		IAI47_07210	0.87	+0.5
1,525,672	+		IAI47_07210	0.87	+0.5
1,525,673	-		IAI47_07210	0.87	-1.0
1,525,673	-		IAI47_07210	0.87	+0.8
1,525,673	-		IAI47_07210	0.87	+1.1
1,525,673	-		IAI47_07210	0.87	-0.6
1,525,673	-		IAI47_07210	0.87	+0.1
1,525,716	-		IAI47_07210	0.88	+2.6
1,525,763	+				+0.3
1,525,763	+				+0.4
1,525,764	-				+0.3
1,525,764	-				+1.1
1,525,834	+				-1.4
1,525,846	+				+0.6
1,525,847	-				+0.5
1,525,847	-				-1.0
1,525,868	-				+0.3
1,525,899	-				+0.3
1,525,899	-				+0.4
1,525,899	-				+1.5
1,525,939	-				+0.4
1,525,972	+				-0.2
1,525,972	+				+1.5
1,525,973	-				+0.7
1,526,001	+				-1.1
1,526,001	+				+0.2
1,526,001	+				-1.9
1,526,001	+				-0.1
1,526,002	-				-1.2
1,526,002	-				-0.3
1,526,018	+				+0.1
1,526,018	+				+1.7
1,526,018	+				-0.0
1,526,036	+				-0.6
1,526,037	-				-0.6
1,526,070	+				-0.8
1,526,070	+				-0.8
1,526,071	-				+0.7
1,526,071	-				-0.5
1,526,108	+				+0.3
1,526,161	+				+1.2
1,526,162	-				+0.3
1,526,185	+				-0.1
1,526,185	+				+1.5
1,526,187	+				+0.0
1,526,187	+				+1.8
1,526,187	+				+0.4
1,526,187	+				-0.7
1,526,187	+				+0.0
1,526,187	+				+1.0
1,526,187	+				+0.2
1,526,188	-				-0.5
1,526,188	-				-1.4
1,526,188	-				+0.7
1,526,188	-				-0.3
1,526,188	-				+1.0
1,526,222	+				-0.3
1,526,223	-				+0.5
1,526,223	-				-0.7
1,526,223	-				+1.3
1,526,224	+				-0.7
1,526,224	+				-0.3
1,526,224	+				+0.9
1,526,224	+				+1.5
1,526,224	+				-0.2
1,526,224	+				-1.5
1,526,224	+				+0.7
1,526,224	+				+0.4
1,526,224	+				+0.3
1,526,225	-				-0.4
1,526,225	-				+0.6
1,526,225	-				-0.5
1,526,225	-				+0.2
1,526,225	-				+0.0
1,526,225	-				-1.1
1,526,225	-				-1.2
1,526,230	-				+0.5
1,526,302	+				-1.1
1,526,302	+				-1.4
1,526,302	+				+0.4
1,526,303	-				+0.8
1,526,303	-				-1.3
1,526,398	+				-0.7
1,526,398	+				-1.6
1,526,399	-				+0.0
1,526,399	-				+0.3
1,526,508	+				+2.0
1,526,509	-				-0.8
1,526,509	-				+0.4
1,526,513	+				+0.1
1,526,514	-				+0.4
1,526,588	+		IAI47_07215	0.13	-0.4
1,526,588	+		IAI47_07215	0.13	+0.0
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