Experiment: LB, pH10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11530 and BWI76_RS11535 are separated by 324 nucleotides BWI76_RS11535 and BWI76_RS11540 are separated by 26 nucleotides
BWI76_RS11530: BWI76_RS11530 - chitinase, at 2,425,054 to 2,426,307
_RS11530
BWI76_RS11535: BWI76_RS11535 - putative oxidoreductase, Zn-dependent and NAD(P)-binding protein, at 2,426,632 to 2,427,708
_RS11535
BWI76_RS11540: BWI76_RS11540 - MFS transporter, at 2,427,735 to 2,429,114
_RS11540
Position (kb)
2426
2427
2428 Strain fitness (log2 ratio)
-1
0
1
2 at 2425.646 kb on - strand, within BWI76_RS11530 at 2425.753 kb on + strand, within BWI76_RS11530 at 2425.924 kb on + strand, within BWI76_RS11530 at 2426.128 kb on - strand, within BWI76_RS11530 at 2426.467 kb on + strand at 2427.190 kb on - strand, within BWI76_RS11535 at 2427.342 kb on + strand, within BWI76_RS11535 at 2427.510 kb on + strand, within BWI76_RS11535 at 2427.579 kb on - strand, within BWI76_RS11535 at 2427.617 kb on + strand at 2427.951 kb on - strand, within BWI76_RS11540 at 2428.061 kb on + strand, within BWI76_RS11540 at 2428.177 kb on + strand, within BWI76_RS11540 at 2428.207 kb on + strand, within BWI76_RS11540 at 2428.228 kb on - strand, within BWI76_RS11540 at 2428.240 kb on + strand, within BWI76_RS11540 at 2428.240 kb on + strand, within BWI76_RS11540 at 2428.240 kb on + strand, within BWI76_RS11540 at 2428.248 kb on - strand, within BWI76_RS11540 at 2428.248 kb on - strand, within BWI76_RS11540 at 2428.276 kb on + strand, within BWI76_RS11540 at 2428.276 kb on - strand, within BWI76_RS11540 at 2428.308 kb on + strand at 2428.374 kb on - strand, within BWI76_RS11540 at 2428.407 kb on + strand, within BWI76_RS11540 at 2428.413 kb on - strand, within BWI76_RS11540 at 2428.471 kb on + strand, within BWI76_RS11540 at 2428.490 kb on + strand, within BWI76_RS11540 at 2428.490 kb on + strand, within BWI76_RS11540 at 2428.503 kb on - strand, within BWI76_RS11540 at 2428.505 kb on + strand, within BWI76_RS11540 at 2428.513 kb on + strand, within BWI76_RS11540 at 2428.513 kb on + strand, within BWI76_RS11540 at 2428.513 kb on - strand, within BWI76_RS11540 at 2428.521 kb on - strand, within BWI76_RS11540 at 2428.543 kb on + strand, within BWI76_RS11540 at 2428.551 kb on - strand, within BWI76_RS11540 at 2428.551 kb on - strand at 2428.551 kb on - strand, within BWI76_RS11540 at 2428.557 kb on + strand, within BWI76_RS11540 at 2428.557 kb on + strand, within BWI76_RS11540 at 2428.569 kb on + strand, within BWI76_RS11540 at 2428.569 kb on + strand, within BWI76_RS11540 at 2428.569 kb on + strand, within BWI76_RS11540 at 2428.572 kb on + strand, within BWI76_RS11540 at 2428.577 kb on - strand, within BWI76_RS11540
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH10 remove 2,425,646 - BWI76_RS11530 0.47 +0.0 2,425,753 + BWI76_RS11530 0.56 -0.2 2,425,924 + BWI76_RS11530 0.69 -0.1 2,426,128 - BWI76_RS11530 0.86 -0.6 2,426,467 + +0.7 2,427,190 - BWI76_RS11535 0.52 -0.4 2,427,342 + BWI76_RS11535 0.66 -0.8 2,427,510 + BWI76_RS11535 0.82 -1.3 2,427,579 - BWI76_RS11535 0.88 -0.7 2,427,617 + +0.5 2,427,951 - BWI76_RS11540 0.16 +0.3 2,428,061 + BWI76_RS11540 0.24 +0.1 2,428,177 + BWI76_RS11540 0.32 -0.4 2,428,207 + BWI76_RS11540 0.34 +0.1 2,428,228 - BWI76_RS11540 0.36 -0.1 2,428,240 + BWI76_RS11540 0.37 -0.3 2,428,240 + BWI76_RS11540 0.37 -0.1 2,428,240 + BWI76_RS11540 0.37 -0.4 2,428,248 - BWI76_RS11540 0.37 +0.8 2,428,248 - BWI76_RS11540 0.37 -0.7 2,428,276 + BWI76_RS11540 0.39 +0.1 2,428,276 - BWI76_RS11540 0.39 -0.2 2,428,308 + +1.0 2,428,374 - BWI76_RS11540 0.46 +0.1 2,428,407 + BWI76_RS11540 0.49 +1.5 2,428,413 - BWI76_RS11540 0.49 +0.2 2,428,471 + BWI76_RS11540 0.53 -0.6 2,428,490 + BWI76_RS11540 0.55 +1.4 2,428,490 + BWI76_RS11540 0.55 -1.0 2,428,503 - BWI76_RS11540 0.56 +2.6 2,428,505 + BWI76_RS11540 0.56 +1.5 2,428,513 + BWI76_RS11540 0.56 +0.9 2,428,513 + BWI76_RS11540 0.56 -0.9 2,428,513 - BWI76_RS11540 0.56 -1.5 2,428,521 - BWI76_RS11540 0.57 +0.7 2,428,543 + BWI76_RS11540 0.59 -0.1 2,428,551 - BWI76_RS11540 0.59 +0.3 2,428,551 - +0.4 2,428,551 - BWI76_RS11540 0.59 +0.6 2,428,557 + BWI76_RS11540 0.60 -1.0 2,428,557 + BWI76_RS11540 0.60 -0.3 2,428,569 + BWI76_RS11540 0.60 +1.0 2,428,569 + BWI76_RS11540 0.60 -1.7 2,428,569 + BWI76_RS11540 0.60 +0.1 2,428,572 + BWI76_RS11540 0.61 -0.8 2,428,577 - BWI76_RS11540 0.61 +1.6
Or see this region's nucleotide sequence