Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2336

Experiment: SMN_rich

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	SMN_rich
2,704,334	+				-0.4
2,704,335	-				-0.5
2,704,336	+				+0.1
2,704,336	+				-0.2
2,704,336	+				+0.0
2,704,336	+				-0.1
2,704,337	-				-1.1
2,704,337	-				+1.5
2,704,337	-				-0.0
2,704,343	+				-0.2
2,704,344	-				-0.7
2,704,353	+				-0.4
2,704,353	+				+0.5
2,704,353	+				+0.4
2,704,456	+		Rru_A2335	0.13	+0.0
2,704,456	+		Rru_A2335	0.13	+0.7
2,704,456	+		Rru_A2335	0.13	-0.6
2,704,503	+		Rru_A2335	0.19	+0.0
2,704,504	-		Rru_A2335	0.19	+0.3
2,704,531	-		Rru_A2335	0.22	-0.5
2,704,633	+		Rru_A2335	0.34	+1.5
2,704,680	+		Rru_A2335	0.40	-0.7
2,704,680	+		Rru_A2335	0.40	-0.6
2,704,680	+		Rru_A2335	0.40	-0.0
2,704,680	+		Rru_A2335	0.40	-0.2
2,704,680	+		Rru_A2335	0.40	+0.2
2,704,680	+		Rru_A2335	0.40	-0.2
2,704,680	+		Rru_A2335	0.40	+0.0
2,704,680	+		Rru_A2335	0.40	+0.8
2,704,680	+		Rru_A2335	0.40	-0.1
2,704,680	+		Rru_A2335	0.40	-0.0
2,704,680	+		Rru_A2335	0.40	-1.1
2,704,681	-		Rru_A2335	0.40	+1.5
2,704,681	-		Rru_A2335	0.40	-0.2
2,704,681	-		Rru_A2335	0.40	+0.7
2,704,821	+		Rru_A2335	0.57	+0.2
2,704,821	+		Rru_A2335	0.57	-0.5
2,704,821	+		Rru_A2335	0.57	-0.2
2,704,822	-		Rru_A2335	0.57	+0.1
2,704,822	-		Rru_A2335	0.57	-0.2
2,704,822	-		Rru_A2335	0.57	+0.3
2,704,822	-		Rru_A2335	0.57	-0.7
2,704,827	-		Rru_A2335	0.58	-1.2
2,705,072	-		Rru_A2335	0.87	+0.4
2,705,072	-		Rru_A2335	0.87	-0.2
2,705,072	-		Rru_A2335	0.87	-1.0
2,705,072	-		Rru_A2335	0.87	-0.5
2,705,114	+				+0.1
2,705,115	-				-0.2
2,705,134	+				+0.5
2,705,202	+				-0.3
2,705,203	-				+1.5
2,705,564	+		Rru_A2336	0.19	-0.1
2,705,564	+		Rru_A2336	0.19	-0.6
2,705,564	+		Rru_A2336	0.19	-0.5
2,705,565	-		Rru_A2336	0.19	+1.5
2,705,565	-		Rru_A2336	0.19	-0.8
2,705,565	-		Rru_A2336	0.19	-0.0
2,705,565	-		Rru_A2336	0.19	-1.1
2,705,565	-		Rru_A2336	0.19	-0.1
2,705,566	+		Rru_A2336	0.19	+0.7
2,705,567	-		Rru_A2336	0.19	-0.4
2,705,567	-		Rru_A2336	0.19	-0.1
2,705,567	-		Rru_A2336	0.19	+0.3
2,705,612	+		Rru_A2336	0.23	-0.1
2,705,612	+		Rru_A2336	0.23	-1.3
2,705,612	+		Rru_A2336	0.23	-0.4
2,705,638	+		Rru_A2336	0.25	-0.1
2,705,638	+		Rru_A2336	0.25	-0.4
2,705,638	+		Rru_A2336	0.25	-0.5
2,705,638	+		Rru_A2336	0.25	+0.2
2,705,638	+		Rru_A2336	0.25	-0.5
2,705,639	-		Rru_A2336	0.25	-0.5
2,705,650	+		Rru_A2336	0.25	-0.9
2,705,650	+		Rru_A2336	0.25	+0.5
2,705,899	+		Rru_A2336	0.45	-0.4
2,706,037	+		Rru_A2336	0.56	-0.5
2,706,115	+		Rru_A2336	0.62	-0.4
2,706,115	+		Rru_A2336	0.62	+0.8
2,706,116	-		Rru_A2336	0.62	-0.0
2,706,116	-		Rru_A2336	0.62	-0.1
2,706,116	-		Rru_A2336	0.62	+0.0
2,706,116	-		Rru_A2336	0.62	-0.1
2,706,283	+		Rru_A2336	0.75	-1.0
2,706,283	+		Rru_A2336	0.75	-0.6
2,706,284	-		Rru_A2336	0.75	-1.7
2,706,284	-		Rru_A2336	0.75	-0.5
2,706,284	-		Rru_A2336	0.75	+0.6
2,706,284	-		Rru_A2336	0.75	-0.1
2,706,457	+		Rru_A2336	0.89	+0.3
2,706,457	+		Rru_A2336	0.89	-1.0
2,706,458	-		Rru_A2336	0.89	+0.1
2,706,458	-		Rru_A2336	0.89	+0.4
2,706,458	-		Rru_A2336	0.89	-0.6
2,706,553	+				-0.7
2,706,553	+				-0.1
2,706,770	+				+0.1
2,706,771	-				-0.2
2,706,772	+				+0.1
2,706,773	-				-0.1
2,706,807	+				-1.2
2,706,837	-				-0.4
2,706,872	+		Rru_A2337	0.10	+1.5
2,706,872	+		Rru_A2337	0.10	-0.9
2,706,872	+		Rru_A2337	0.10	+0.1
2,706,872	+		Rru_A2337	0.10	-0.7
2,706,872	+		Rru_A2337	0.10	-0.6
2,706,872	+		Rru_A2337	0.10	+0.0
2,706,873	-		Rru_A2337	0.10	-0.3
2,706,873	-		Rru_A2337	0.10	+0.1
2,706,873	-		Rru_A2337	0.10	-0.2
2,706,879	-		Rru_A2337	0.11	+0.1
2,707,052	+		Rru_A2337	0.19	+0.8
2,707,053	-		Rru_A2337	0.19	-1.2
2,707,053	-		Rru_A2337	0.19	-0.0
2,707,053	-		Rru_A2337	0.19	-0.4
2,707,175	+		Rru_A2337	0.24	-0.2
2,707,175	+		Rru_A2337	0.24	-0.1
2,707,175	+		Rru_A2337	0.24	+1.5
2,707,175	+		Rru_A2337	0.24	+1.5
2,707,175	+		Rru_A2337	0.24	-0.4
2,707,176	-		Rru_A2337	0.24	+0.5
2,707,176	-		Rru_A2337	0.24	-0.9
2,707,176	-		Rru_A2337	0.24	-0.1
2,707,176	-		Rru_A2337	0.24	+0.2
2,707,176	-		Rru_A2337	0.24	-0.3
2,707,176	-		Rru_A2337	0.24	-0.4
2,707,266	-		Rru_A2337	0.28	-0.9
2,707,266	-		Rru_A2337	0.28	-0.9
2,707,266	-		Rru_A2337	0.28	+0.2
2,707,284	-		Rru_A2337	0.29	-0.7
2,707,310	+		Rru_A2337	0.30	-0.7
2,707,310	+		Rru_A2337	0.30	-0.2
2,707,311	-		Rru_A2337	0.30	+0.4
2,707,311	-		Rru_A2337	0.30	+1.5
2,707,311	-		Rru_A2337	0.30	-1.1
2,707,334	+		Rru_A2337	0.31	-0.7
2,707,356	-		Rru_A2337	0.32	+1.5
2,707,356	-		Rru_A2337	0.32	+0.6
2,707,359	+		Rru_A2337	0.32	-0.1
2,707,359	+		Rru_A2337	0.32	+1.1
2,707,359	+		Rru_A2337	0.32	-0.1
2,707,382	+		Rru_A2337	0.33	+0.2
2,707,382	+		Rru_A2337	0.33	+0.6
2,707,460	+		Rru_A2337	0.37	-1.1
2,707,461	-		Rru_A2337	0.37	+0.2
2,707,461	-		Rru_A2337	0.37	+0.7
2,707,461	-		Rru_A2337	0.37	-0.2
2,707,472	+		Rru_A2337	0.37	-0.6
2,707,472	+		Rru_A2337	0.37	-0.1
2,707,472	+		Rru_A2337	0.37	-0.1
2,707,472	+		Rru_A2337	0.37	+1.5
2,707,480	-		Rru_A2337	0.38	-0.7
2,707,492	-		Rru_A2337	0.38	+0.5
2,707,550	+		Rru_A2337	0.41	+0.1
2,707,550	+		Rru_A2337	0.41	-0.5
2,707,551	-		Rru_A2337	0.41	-0.7
2,707,551	-		Rru_A2337	0.41	-1.4