Strain Fitness in Pantoea sp. MT58 around IAI47_06500

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
1,349,828	-		IAI47_06495	0.64	-0.3
1,349,828	-		IAI47_06495	0.64	-0.3
1,349,862	+		IAI47_06495	0.66	-1.0
1,349,863	-		IAI47_06495	0.66	-1.1
1,349,867	+		IAI47_06495	0.66	+1.4
1,349,868	-		IAI47_06495	0.66	-0.3
1,349,868	-		IAI47_06495	0.66	-0.1
1,349,868	-		IAI47_06495	0.66	-0.7
1,349,868	-		IAI47_06495	0.66	+0.2
1,349,914	+		IAI47_06495	0.68	+0.7
1,349,915	-		IAI47_06495	0.69	+1.1
1,349,966	+		IAI47_06495	0.71	-1.3
1,349,967	-		IAI47_06495	0.71	-0.4
1,349,967	-		IAI47_06495	0.71	-0.3
1,350,000	+		IAI47_06495	0.73	+0.3
1,350,000	+		IAI47_06495	0.73	+0.2
1,350,000	+		IAI47_06495	0.73	-0.1
1,350,000	+		IAI47_06495	0.73	-1.1
1,350,000	+		IAI47_06495	0.73	+0.0
1,350,000	+		IAI47_06495	0.73	-0.2
1,350,001	-		IAI47_06495	0.73	+0.4
1,350,001	-		IAI47_06495	0.73	+1.2
1,350,001	-		IAI47_06495	0.73	-1.9
1,350,001	-		IAI47_06495	0.73	+1.1
1,350,004	+		IAI47_06495	0.73	-1.2
1,350,004	+		IAI47_06495	0.73	+0.2
1,350,004	+		IAI47_06495	0.73	+1.1
1,350,004	+		IAI47_06495	0.73	+1.0
1,350,004	+		IAI47_06495	0.73	-0.5
1,350,005	-		IAI47_06495	0.73	+0.6
1,350,005	-		IAI47_06495	0.73	+1.5
1,350,015	+		IAI47_06495	0.74	-0.4
1,350,016	-		IAI47_06495	0.74	-0.3
1,350,016	-		IAI47_06495	0.74	+0.2
1,350,144	+		IAI47_06495	0.80	-1.2
1,350,145	-		IAI47_06495	0.80	+0.5
1,350,145	-		IAI47_06495	0.80	+2.4
1,350,164	+		IAI47_06495	0.81	+0.9
1,350,165	-		IAI47_06495	0.81	+0.2
1,350,165	-		IAI47_06495	0.81	-0.3
1,350,165	-		IAI47_06495	0.81	+0.6
1,350,165	-		IAI47_06495	0.81	+0.0
1,350,283	+		IAI47_06495	0.88	-1.4
1,350,342	+				+0.4
1,350,343	-				-1.2
1,350,470	+				+2.0
1,350,470	+				+0.1
1,350,471	-				-0.5
1,350,471	-				+0.9
1,350,471	-				+1.8
1,350,472	+				-0.8
1,350,472	+				+0.2
1,350,472	+				+0.0
1,350,472	+				-0.0
1,350,472	+				+1.3
1,350,472	+				-2.0
1,350,472	+				-0.3
1,350,472	+				+0.2
1,350,472	+				+0.0
1,350,472	+				-1.1
1,350,472	+				-0.2
1,350,472	+				+0.4
1,350,472	+				+0.4
1,350,472	+				-0.2
1,350,472	+				-0.5
1,350,472	+				+0.1
1,350,472	+				+0.2
1,350,473	-				+0.1
1,350,473	-				-0.0
1,350,473	-				-0.2
1,350,473	-				+0.5
1,350,473	-				-0.1
1,350,473	-				+0.7
1,350,473	-				-1.1
1,350,473	-				-0.1
1,350,473	-				+0.5
1,350,473	-				-0.5
1,350,473	-				-0.6
1,350,473	-				-0.1
1,350,473	-				+0.5
1,350,473	-				+0.7
1,350,544	+				+0.1
1,350,544	+				+1.0
1,350,545	-				-1.1
1,350,567	+				-1.5
1,350,568	-				-0.6
1,350,568	-				-1.6
1,350,628	+				-1.3
1,350,628	+				+1.6
1,350,628	+				+1.8
1,350,628	+				+1.3
1,350,629	-				-0.4
1,350,629	-				-0.6
1,350,629	-				-2.5
1,350,632	-				+1.0
1,350,646	+				-2.8
1,350,646	+				+0.5
1,350,646	+				-0.1
1,350,647	-				-1.1
1,350,647	-				+0.4
1,350,647	-				-1.6
1,350,647	-				-1.8
1,350,651	-				+0.7
1,350,659	+				+1.3
1,350,659	+				-0.5
1,350,659	+				-0.3
1,350,659	+				+0.7
1,350,660	-				+0.4
1,350,660	-				-1.4
1,350,660	-				-0.5
1,350,670	+				-0.9
1,350,671	-				+1.2
1,350,681	-				+0.9
1,350,681	-				-1.3
1,350,681	-				-0.3
1,350,689	+				-0.9
1,350,689	+				+0.1
1,350,693	+				+0.8
1,350,694	-				-1.8
1,350,694	-				+0.5
1,350,697	+				-0.4
1,350,712	+				+0.7
1,350,713	-				-1.7
1,350,727	+				-0.1
1,350,727	+				-0.1
1,350,735	+				-0.1
1,350,736	-				-0.5
1,350,736	-				-0.4
1,350,803	+				-0.4
1,350,803	+				-0.0
1,350,803	+				+0.4
1,350,804	-				-2.1
1,350,804	-				-2.0
1,350,804	-				-1.1
1,350,819	+				+0.1
1,350,820	-				+0.4
1,350,825	+				+0.2
1,350,826	-				-0.5
1,350,844	-				-2.0
1,350,852	+				+1.4
1,350,853	-				-1.0
1,350,853	-				-1.0
1,350,960	+				-0.5
1,350,961	-				-0.7
1,350,961	-				-0.4
1,350,961	-				-1.0
1,351,160	-		IAI47_06500	0.25	+1.8
1,351,160	-		IAI47_06500	0.25	-0.7
1,351,169	-		IAI47_06500	0.25	-0.3
1,351,182	-		IAI47_06500	0.26	-1.0
1,351,182	-		IAI47_06500	0.26	-2.5
1,351,182	-		IAI47_06500	0.26	-0.6
1,351,196	-		IAI47_06500	0.27	-0.7
1,351,239	-		IAI47_06500	0.30	+0.2
1,351,282	+		IAI47_06500	0.34	-0.3
1,351,282	+		IAI47_06500	0.34	-1.8
1,351,295	+		IAI47_06500	0.35	-0.5
1,351,296	-		IAI47_06500	0.35	-0.1
1,351,296	-		IAI47_06500	0.35	-0.8
1,351,313	+		IAI47_06500	0.36	+0.5
1,351,342	+		IAI47_06500	0.38	+0.6
1,351,342	+		IAI47_06500	0.38	-2.1
1,351,342	+		IAI47_06500	0.38	-0.8
1,351,342	+		IAI47_06500	0.38	-0.2
1,351,342	+		IAI47_06500	0.38	-1.0
1,351,342	+		IAI47_06500	0.38	+0.5
1,351,343	-		IAI47_06500	0.38	+1.0
1,351,343	-		IAI47_06500	0.38	+0.5
1,351,343	-		IAI47_06500	0.38	-1.0
1,351,343	-		IAI47_06500	0.38	-0.4
1,351,343	-		IAI47_06500	0.38	+1.3
1,351,346	-		IAI47_06500	0.38	-1.3
1,351,346	-		IAI47_06500	0.38	-0.3
1,351,469	+		IAI47_06500	0.47	-1.0
1,351,509	+		IAI47_06500	0.50	+0.2
1,351,509	+		IAI47_06500	0.50	-0.2
1,351,510	-		IAI47_06500	0.50	-0.4
1,351,510	-		IAI47_06500	0.50	-0.4
1,351,510	-		IAI47_06500	0.50	+1.1
1,351,510	-		IAI47_06500	0.50	+0.1
1,351,592	+		IAI47_06500	0.56	-0.3
1,351,593	-		IAI47_06500	0.56	-0.3
1,351,628	-		IAI47_06500	0.59	-0.5
1,351,775	+		IAI47_06500	0.70	+0.2
1,351,775	+		IAI47_06500	0.70	+0.4
1,351,775	+		IAI47_06500	0.70	-1.9
1,351,776	-		IAI47_06500	0.70	-0.1
1,351,776	-		IAI47_06500	0.70	+1.2
1,351,867	+		IAI47_06500	0.77	-0.7
1,351,868	-		IAI47_06500	0.77	+0.9
1,351,868	-		IAI47_06500	0.77	+0.0
1,351,889	+		IAI47_06500	0.78	-1.3
1,351,890	-		IAI47_06500	0.78	-0.1
1,351,971	-		IAI47_06500	0.84	-1.7
1,351,971	-		IAI47_06500	0.84	+0.8
1,351,971	-		IAI47_06500	0.84	-0.1
1,351,983	-		IAI47_06500	0.85	-0.9
1,352,022	+		IAI47_06500	0.88	-0.5
1,352,022	+		IAI47_06500	0.88	-0.3
1,352,023	-		IAI47_06500	0.88	-1.1
1,352,056	+				-0.2
1,352,056	+				+0.3
1,352,056	+				+1.2
1,352,056	+				-1.3
1,352,056	+				-2.0
1,352,057	-				-0.6
1,352,057	-				-0.0
1,352,057	-				+1.4
1,352,069	+				-1.2
1,352,069	+				+2.2
1,352,069	+				-2.0
1,352,069	+				-0.5
1,352,069	+				+0.2
1,352,070	-				-2.0
1,352,070	-				-0.0
1,352,070	-				+0.4
1,352,126	-				-1.0
1,352,180	+				+0.9
1,352,181	-				-0.4
1,352,181	-				+0.6
1,352,187	-				-0.4
1,352,204	+				-0.4
1,352,204	+				+0.1
1,352,204	+				-0.0
1,352,204	+				-0.6
1,352,204	+				-1.5
1,352,204	+				-1.1
1,352,204	+				-1.4
1,352,205	-				-0.9
1,352,205	-				-1.9
1,352,205	-				+0.7
1,352,210	-				+1.0
1,352,219	+				-1.7
1,352,225	+				-1.4
1,352,449	+		IAI47_06505	0.12	+1.4
1,352,449	+		IAI47_06505	0.12	-0.3
1,352,449	+		IAI47_06505	0.12	+0.8
1,352,450	-		IAI47_06505	0.12	-2.0
1,352,466	-		IAI47_06505	0.12	-1.1
1,352,490	+		IAI47_06505	0.14	-0.0
1,352,533	+		IAI47_06505	0.16	-1.0
1,352,628	+		IAI47_06505	0.20	-0.3
1,352,628	+		IAI47_06505	0.20	-2.4
1,352,629	-		IAI47_06505	0.20	-0.9
1,352,629	-		IAI47_06505	0.20	+0.3
1,352,629	-		IAI47_06505	0.20	-0.7
1,352,675	+		IAI47_06505	0.22	+0.8
1,352,675	+		IAI47_06505	0.22	-0.2
1,352,675	+		IAI47_06505	0.22	-0.3
1,352,676	-		IAI47_06505	0.22	-1.5
1,352,708	+				-0.0
1,352,751	+		IAI47_06505	0.26	+0.5
1,352,813	+		IAI47_06505	0.29	-0.3
1,352,832	+		IAI47_06505	0.30	-0.5
1,352,832	+		IAI47_06505	0.30	-0.8
1,352,833	-		IAI47_06505	0.30	-0.7
1,352,833	-		IAI47_06505	0.30	+0.6
1,352,833	-		IAI47_06505	0.30	-0.5
1,352,833	-		IAI47_06505	0.30	-1.3
1,352,833	-		IAI47_06505	0.30	-1.7
1,352,838	-		IAI47_06505	0.30	-0.9
1,352,869	+		IAI47_06505	0.31	+0.1
1,352,869	+		IAI47_06505	0.31	+1.0
1,352,869	+		IAI47_06505	0.31	-1.0
1,352,869	+		IAI47_06505	0.31	-1.4
1,352,876	+		IAI47_06505	0.32	-0.7
1,352,876	+		IAI47_06505	0.32	-0.8
1,352,876	+		IAI47_06505	0.32	+0.1
1,352,876	+		IAI47_06505	0.32	-1.4
1,352,966	+		IAI47_06505	0.36	-0.4
1,352,966	+		IAI47_06505	0.36	-0.2
1,352,967	-		IAI47_06505	0.36	-0.4
1,353,051	-		IAI47_06505	0.40	-0.4
1,353,078	-		IAI47_06505	0.41	-0.9
1,353,080	-		IAI47_06505	0.41	-0.5
1,353,170	+		IAI47_06505	0.45	+2.0