Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3255 and HP15_3256 are separated by 789 nucleotides HP15_3256 and HP15_3257 are separated by 47 nucleotides HP15_3257 and HP15_3258 overlap by 26 nucleotides HP15_3258 and HP15_3259 are separated by 114 nucleotides
HP15_3255: HP15_3255 - mercuric ion reductase, at 3,409,274 to 3,410,716
_3255
HP15_3256: HP15_3256 - phospho-2-dehydro-3-heoxyheptonate aldolase, at 3,411,506 to 3,412,558
_3256
HP15_3257: HP15_3257 - hypothetical protein, at 3,412,606 to 3,412,719
_3257
HP15_3258: HP15_3258 - hypothetical protein, at 3,412,694 to 3,412,804
_3258
HP15_3259: HP15_3259 - NolW domain protein, at 3,412,919 to 3,413,707
_3259
Position (kb)
3411
3412
3413 Strain fitness (log2 ratio)
-1
0
1 at 3410.564 kb on + strand, within HP15_3255 at 3410.577 kb on - strand at 3410.623 kb on - strand at 3410.703 kb on - strand at 3410.723 kb on - strand at 3410.783 kb on + strand at 3410.791 kb on - strand at 3410.868 kb on + strand at 3410.940 kb on + strand at 3410.989 kb on - strand at 3410.989 kb on - strand at 3411.134 kb on + strand at 3411.134 kb on - strand at 3411.277 kb on + strand at 3411.312 kb on - strand at 3411.369 kb on - strand at 3411.369 kb on - strand at 3411.518 kb on + strand at 3411.526 kb on - strand at 3411.744 kb on + strand, within HP15_3256 at 3412.344 kb on + strand, within HP15_3256 at 3412.520 kb on - strand at 3412.898 kb on + strand at 3412.906 kb on - strand at 3412.944 kb on - strand at 3412.963 kb on - strand at 3412.999 kb on - strand, within HP15_3259 at 3413.054 kb on + strand, within HP15_3259 at 3413.062 kb on - strand, within HP15_3259 at 3413.248 kb on - strand, within HP15_3259 at 3413.361 kb on + strand, within HP15_3259
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.032 mg/ml remove 3,410,564 + HP15_3255 0.89 +0.7 3,410,577 - -0.5 3,410,623 - -0.1 3,410,703 - +0.1 3,410,723 - -0.8 3,410,783 + +0.7 3,410,791 - -0.1 3,410,868 + +0.5 3,410,940 + -0.5 3,410,989 - -0.0 3,410,989 - +0.2 3,411,134 + +0.1 3,411,134 - +0.1 3,411,277 + +0.0 3,411,312 - -0.5 3,411,369 - +1.5 3,411,369 - +0.4 3,411,518 + -1.2 3,411,526 - -0.3 3,411,744 + HP15_3256 0.23 +0.1 3,412,344 + HP15_3256 0.80 +0.9 3,412,520 - -0.3 3,412,898 + -0.5 3,412,906 - -0.4 3,412,944 - +0.5 3,412,963 - -0.1 3,412,999 - HP15_3259 0.10 +0.2 3,413,054 + HP15_3259 0.17 +1.3 3,413,062 - HP15_3259 0.18 -0.5 3,413,248 - HP15_3259 0.42 +0.2 3,413,361 + HP15_3259 0.56 -0.2
Or see this region's nucleotide sequence