Strain Fitness in Pantoea sp. MT58 around IAI47_12285

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
2,595,988	-		IAI47_12280	0.53	-2.0
2,595,998	+		IAI47_12280	0.54	-1.8
2,595,999	-		IAI47_12280	0.54	-3.1
2,596,005	+		IAI47_12280	0.54	-3.0
2,596,005	+		IAI47_12280	0.54	-0.5
2,596,055	+		IAI47_12280	0.57	-1.5
2,596,056	-		IAI47_12280	0.58	-2.3
2,596,091	+		IAI47_12280	0.60	-0.4
2,596,091	+		IAI47_12280	0.60	-2.1
2,596,091	+		IAI47_12280	0.60	-3.0
2,596,091	+		IAI47_12280	0.60	-2.1
2,596,091	+		IAI47_12280	0.60	-2.9
2,596,092	-		IAI47_12280	0.60	-3.6
2,596,092	-		IAI47_12280	0.60	-3.4
2,596,092	-		IAI47_12280	0.60	-1.4
2,596,092	-		IAI47_12280	0.60	-3.2
2,596,119	+		IAI47_12280	0.62	-1.5
2,596,120	-		IAI47_12280	0.62	-1.5
2,596,212	-		IAI47_12280	0.68	-2.3
2,596,241	+		IAI47_12280	0.70	-3.4
2,596,242	-		IAI47_12280	0.70	-2.4
2,596,242	-		IAI47_12280	0.70	-1.6
2,596,242	-		IAI47_12280	0.70	-1.5
2,596,279	-		IAI47_12280	0.72	-2.1
2,596,298	+		IAI47_12280	0.73	-0.4
2,596,299	-		IAI47_12280	0.73	-2.5
2,596,354	+		IAI47_12280	0.77	-2.1
2,596,354	+		IAI47_12280	0.77	-1.9
2,596,354	+		IAI47_12280	0.77	-3.1
2,596,354	+		IAI47_12280	0.77	-2.2
2,596,355	-		IAI47_12280	0.77	-1.8
2,596,355	-		IAI47_12280	0.77	-2.5
2,596,355	-		IAI47_12280	0.77	-2.0
2,596,355	-		IAI47_12280	0.77	-1.2
2,596,385	+		IAI47_12280	0.79	-1.1
2,596,385	+		IAI47_12280	0.79	-3.7
2,596,385	+		IAI47_12280	0.79	-2.7
2,596,385	+		IAI47_12280	0.79	-2.2
2,596,385	+		IAI47_12280	0.79	-2.5
2,596,385	+		IAI47_12280	0.79	-1.7
2,596,386	-		IAI47_12280	0.79	-0.7
2,596,386	-		IAI47_12280	0.79	-2.9
2,596,386	-		IAI47_12280	0.79	-1.5
2,596,386	-		IAI47_12280	0.79	-1.7
2,596,390	-		IAI47_12280	0.79	-2.1
2,596,442	-		IAI47_12280	0.83	-0.8
2,596,445	+		IAI47_12280	0.83	-1.2
2,596,445	+		IAI47_12280	0.83	-2.0
2,596,445	+		IAI47_12280	0.83	-0.4
2,596,445	+		IAI47_12280	0.83	-1.8
2,596,445	+		IAI47_12280	0.83	-1.0
2,596,445	+		IAI47_12280	0.83	-1.0
2,596,446	-		IAI47_12280	0.83	-0.7
2,596,446	-		IAI47_12280	0.83	-0.7
2,596,446	-		IAI47_12280	0.83	-0.4
2,596,446	-		IAI47_12280	0.83	+1.6
2,596,446	-		IAI47_12280	0.83	-1.0
2,596,446	-		IAI47_12280	0.83	-1.9
2,596,460	+		IAI47_12280	0.84	-0.8
2,596,460	+		IAI47_12280	0.84	-1.0
2,596,460	+		IAI47_12280	0.84	-2.2
2,596,460	+		IAI47_12280	0.84	-2.2
2,596,460	+		IAI47_12280	0.84	-2.2
2,596,461	-		IAI47_12280	0.84	-1.7
2,596,461	-		IAI47_12280	0.84	-3.6
2,596,461	-		IAI47_12280	0.84	-1.9
2,596,461	-		IAI47_12280	0.84	-2.1
2,596,461	-		IAI47_12280	0.84	-2.7
2,596,461	-		IAI47_12280	0.84	-0.4
2,596,461	-		IAI47_12280	0.84	-2.6
2,596,461	-		IAI47_12280	0.84	-3.2
2,596,507	-		IAI47_12280	0.87	-1.2
2,596,507	-		IAI47_12280	0.87	-2.4
2,596,516	-		IAI47_12280	0.88	-2.2
2,596,533	-		IAI47_12280	0.89	-3.4
2,596,533	-		IAI47_12280	0.89	-2.1
2,596,567	+				-2.5
2,596,568	-				-0.4
2,596,568	-				-2.0
2,596,568	-				-2.0
2,596,578	+				-0.4
2,596,624	+				-1.5
2,596,624	+				-2.9
2,596,625	-				-2.4
2,596,638	+				-2.5
2,596,653	+				-2.5
2,596,654	-				-2.9
2,596,661	+				-1.8
2,596,661	+				-2.1
2,596,662	-				-0.2
2,596,683	+				-2.9
2,596,684	-				-1.8
2,596,696	+				-2.1
2,596,697	-				+2.0
2,596,759	-				-0.4
2,596,759	-				+0.2
2,596,773	+				-2.0
2,596,773	+				-0.5
2,596,774	-				+1.7
2,596,787	-				-0.4
2,596,806	+				-0.4
2,596,806	+				-0.9
2,596,806	+				+1.3
2,596,806	+				-0.4
2,596,807	-				+0.7
2,596,807	-				+0.0
2,596,807	-				+1.3
2,596,852	+				+0.4
2,596,861	+				+0.9
2,596,861	+				+0.6
2,596,861	+				-0.4
2,596,862	-				+0.3
2,596,862	-				+0.0
2,596,862	-				-0.3
2,596,862	-				-0.4
2,596,862	-				-0.3
2,596,862	-				+0.9
2,596,868	+				-2.3
2,596,883	+				+1.6
2,596,883	+				+0.6
2,596,883	+				+0.5
2,596,883	+				+0.2
2,596,883	+				-1.1
2,596,883	+				+1.0
2,596,883	+				-0.1
2,596,884	-				+0.6
2,596,884	-				-0.3
2,596,884	-				+0.8
2,596,884	-				+0.1
2,596,884	-				+2.6
2,596,884	-				-0.1
2,596,884	-				+0.0
2,596,884	-				-0.7
2,596,886	+				+0.9
2,596,886	+				-0.5
2,596,886	+				+0.1
2,596,887	-				+1.0
2,596,887	-				+0.9
2,596,887	-				-0.8
2,596,888	+				+1.1
2,596,888	+				+0.4
2,596,888	+				+1.0
2,596,888	+				-0.7
2,596,888	+				+2.0
2,596,888	+				+0.0
2,596,888	+				+1.2
2,596,888	+				-0.2
2,596,888	+				-0.5
2,596,888	+				+1.0
2,596,889	-				+0.9
2,596,889	-				+0.0
2,596,889	-				+0.6
2,596,889	-				+1.2
2,596,889	-				+0.6
2,596,889	-				+4.6
2,596,889	-				+0.5
2,596,889	-				+0.9
2,596,889	-				+0.8
2,596,889	-				+0.5
2,596,889	-				-1.5
2,596,924	+				+0.3
2,596,924	+				-0.2
2,596,924	+				-1.0
2,596,924	+				+0.3
2,596,925	-				+0.0
2,596,925	-				+0.6
2,596,925	-				+0.3
2,596,925	-				+0.9
2,596,952	+				-1.5
2,596,952	+				+0.6
2,596,952	+				-0.0
2,596,952	+				-1.3
2,596,952	+				+1.1
2,596,952	+				-0.7
2,596,952	+				+0.1
2,596,952	+				+0.4
2,596,953	-				-0.1
2,596,953	-				+1.4
2,596,956	+				-0.7
2,596,956	+				-0.9
2,596,956	+				+1.5
2,596,956	+				-0.5
2,596,957	-				-0.7
2,596,957	-				+0.8
2,596,957	-				-0.8
2,596,957	-				-0.0
2,596,957	-				-1.3
2,596,957	-				+0.7
2,596,957	-				+1.5
2,596,957	-				-0.5
2,596,957	-				+0.6
2,596,957	-				-0.4
2,596,957	-				-0.2
2,596,957	-				+0.8
2,596,957	-				+0.4
2,596,975	+				-0.2
2,596,975	+				+0.2
2,596,975	+				-0.1
2,596,976	-				+2.8
2,596,976	-				-1.1
2,596,981	+				-0.2
2,596,981	+				+0.0
2,596,982	-				+2.6
2,596,982	-				+0.7
2,596,982	-				-0.3
2,596,982	-				-0.4
2,596,986	+				-0.8
2,596,986	+				-0.8
2,596,987	-				+0.0
2,597,003	+				+0.1
2,597,004	-				-0.8
2,597,004	-				+0.9
2,597,004	-				-0.2
2,597,019	+				-0.8
2,597,020	-				-0.5
2,597,020	-				+0.1
2,597,027	+				-1.1
2,597,027	+				+0.8
2,597,027	+				-0.3
2,597,028	-				-0.3
2,597,028	-				+1.8
2,597,037	+				+0.9
2,597,037	+				+0.8
2,597,037	+				-0.3
2,597,038	-				-0.1
2,597,038	-				+0.4
2,597,038	-				-0.5
2,597,046	+				-2.0
2,597,046	+				+0.5
2,597,047	-				-1.3
2,597,070	-				-1.4
2,597,137	+		IAI47_12285	0.14	-0.4
2,597,138	-		IAI47_12285	0.14	+0.0
2,597,152	+		IAI47_12285	0.16	+1.0
2,597,152	+		IAI47_12285	0.16	+0.8
2,597,152	+		IAI47_12285	0.16	+0.7
2,597,153	-		IAI47_12285	0.16	+0.5
2,597,153	-		IAI47_12285	0.16	+0.8
2,597,181	-		IAI47_12285	0.18	-1.2
2,597,189	+		IAI47_12285	0.19	+0.2
2,597,189	+		IAI47_12285	0.19	-0.1
2,597,198	+		IAI47_12285	0.20	+1.1
2,597,198	+		IAI47_12285	0.20	+0.1
2,597,199	-		IAI47_12285	0.20	-0.4
2,597,199	-		IAI47_12285	0.20	+0.0
2,597,199	-		IAI47_12285	0.20	+0.4
2,597,320	+		IAI47_12285	0.30	+0.4
2,597,320	+		IAI47_12285	0.30	+0.5
2,597,321	-		IAI47_12285	0.30	-1.5
2,597,321	-		IAI47_12285	0.30	+0.2
2,597,321	-		IAI47_12285	0.30	+0.7
2,597,321	-		IAI47_12285	0.30	-0.7
2,597,321	-		IAI47_12285	0.30	-0.7
2,597,480	+		IAI47_12285	0.44	-0.2
2,597,480	+		IAI47_12285	0.44	-0.1
2,597,481	-		IAI47_12285	0.45	+0.8
2,597,481	-		IAI47_12285	0.45	-1.0
2,597,481	-		IAI47_12285	0.45	+0.0
2,597,482	+		IAI47_12285	0.45	-0.8
2,597,483	-		IAI47_12285	0.45	-0.2
2,597,517	+		IAI47_12285	0.48	-2.0
2,597,517	+		IAI47_12285	0.48	-0.5
2,597,518	-		IAI47_12285	0.48	-1.8
2,597,563	+		IAI47_12285	0.52	-0.5
2,597,564	-		IAI47_12285	0.52	+0.5
2,597,564	-		IAI47_12285	0.52	+0.8
2,597,564	-		IAI47_12285	0.52	+0.9
2,597,564	-		IAI47_12285	0.52	-1.2
2,597,566	-		IAI47_12285	0.52	-1.0
2,597,566	-		IAI47_12285	0.52	+0.0
2,597,595	+		IAI47_12285	0.55	+2.2
2,597,595	+		IAI47_12285	0.55	-0.6
2,597,596	-		IAI47_12285	0.55	+1.5
2,597,596	-		IAI47_12285	0.55	+2.3
2,597,611	+		IAI47_12285	0.56	+0.8
2,597,627	+		IAI47_12285	0.57	-0.3
2,597,628	-		IAI47_12285	0.57	+0.6
2,597,699	-		IAI47_12285	0.64	+1.7
2,597,699	-		IAI47_12285	0.64	-1.0
2,597,699	-		IAI47_12285	0.64	-0.8
2,597,699	-		IAI47_12285	0.64	+0.3
2,597,699	-		IAI47_12285	0.64	-0.5
2,597,741	+		IAI47_12285	0.67	+0.1
2,597,741	+		IAI47_12285	0.67	-0.2
2,597,742	-		IAI47_12285	0.68	-1.6
2,597,742	-		IAI47_12285	0.68	-0.2
2,597,781	+		IAI47_12285	0.71	+0.2
2,597,781	+		IAI47_12285	0.71	+1.0
2,597,782	-		IAI47_12285	0.71	+1.6
2,597,782	-		IAI47_12285	0.71	+0.3
2,597,782	-		IAI47_12285	0.71	-0.5
2,597,783	+		IAI47_12285	0.71	-0.4
2,597,783	+		IAI47_12285	0.71	-0.6
2,597,783	+		IAI47_12285	0.71	+0.0
2,597,783	+		IAI47_12285	0.71	-0.3
2,597,783	+		IAI47_12285	0.71	-1.2
2,597,783	+		IAI47_12285	0.71	+0.3
2,597,784	-		IAI47_12285	0.71	-0.6
2,597,784	-		IAI47_12285	0.71	-0.2
2,597,784	-		IAI47_12285	0.71	+1.0
2,597,784	-		IAI47_12285	0.71	-0.4
2,597,800	+		IAI47_12285	0.73	+0.5
2,597,854	+		IAI47_12285	0.77	+0.1
2,597,854	+		IAI47_12285	0.77	+0.7
2,597,854	+		IAI47_12285	0.77	-1.1
2,597,854	+		IAI47_12285	0.77	-0.4
2,597,854	+		IAI47_12285	0.77	-0.2
2,597,855	-		IAI47_12285	0.78	-2.5
2,597,855	-		IAI47_12285	0.78	-0.5
2,597,855	-		IAI47_12285	0.78	-0.5
2,597,855	-		IAI47_12285	0.78	-1.5
2,597,855	-		IAI47_12285	0.78	-1.1
2,597,888	+		IAI47_12285	0.80	-1.3
2,597,888	+		IAI47_12285	0.80	+0.9
2,597,888	+		IAI47_12285	0.80	-1.3
2,597,888	+		IAI47_12285	0.80	-0.3
2,597,888	+		IAI47_12285	0.80	+0.3
2,597,888	+		IAI47_12285	0.80	+0.4
2,597,888	+		IAI47_12285	0.80	-1.7
2,597,888	+		IAI47_12285	0.80	-0.1
2,597,889	-		IAI47_12285	0.81	-0.0
2,597,889	-		IAI47_12285	0.81	+1.5
2,597,889	-		IAI47_12285	0.81	+0.7
2,597,889	-		IAI47_12285	0.81	+1.1
2,597,911	+		IAI47_12285	0.82	-0.5
2,597,911	+		IAI47_12285	0.82	-0.5
2,597,911	+		IAI47_12285	0.82	-0.9
2,597,911	+		IAI47_12285	0.82	-1.0
2,597,911	+		IAI47_12285	0.82	-0.1
2,597,911	+		IAI47_12285	0.82	-0.7
2,597,912	-		IAI47_12285	0.83	+1.0
2,597,912	-		IAI47_12285	0.83	-1.0
2,597,912	-		IAI47_12285	0.83	-0.1
2,597,912	-		IAI47_12285	0.83	+0.1
2,597,912	-		IAI47_12285	0.83	+1.0
2,597,915	+		IAI47_12285	0.83	+0.3
2,597,915	+		IAI47_12285	0.83	-0.4
2,597,915	+		IAI47_12285	0.83	-0.2
2,597,916	-		IAI47_12285	0.83	-1.7
2,597,916	-		IAI47_12285	0.83	-1.9
2,597,945	+		IAI47_12285	0.85	+0.8
2,597,945	+		IAI47_12285	0.85	-0.5
2,597,945	+		IAI47_12285	0.85	-0.9
2,597,945	+		IAI47_12285	0.85	-1.4
2,597,946	-		IAI47_12285	0.86	-2.1
2,597,950	+		IAI47_12285	0.86	+0.8
2,597,950	+		IAI47_12285	0.86	+0.2
2,597,950	+		IAI47_12285	0.86	+0.2
2,597,950	+		IAI47_12285	0.86	+0.8
2,597,950	+		IAI47_12285	0.86	+0.2
2,597,951	-		IAI47_12285	0.86	+0.1
2,597,951	-		IAI47_12285	0.86	-2.2
2,597,951	-		IAI47_12285	0.86	-0.3
2,597,951	-		IAI47_12285	0.86	+1.0
2,597,951	-		IAI47_12285	0.86	+0.8
2,597,951	-		IAI47_12285	0.86	-0.4
2,597,954	+		IAI47_12285	0.86	-0.8
2,597,954	+		IAI47_12285	0.86	+0.0
2,597,954	+		IAI47_12285	0.86	+0.3
2,597,954	+		IAI47_12285	0.86	-0.3
2,597,955	-		IAI47_12285	0.86	-1.0
2,597,955	-		IAI47_12285	0.86	+0.0
2,597,955	-		IAI47_12285	0.86	+0.1
2,597,955	-		IAI47_12285	0.86	+1.0
2,597,955	-		IAI47_12285	0.86	-0.8
2,597,955	-		IAI47_12285	0.86	+0.6
2,597,955	-		IAI47_12285	0.86	-0.8
2,597,955	-		IAI47_12285	0.86	-1.8
2,597,955	-		IAI47_12285	0.86	+0.6
2,597,955	-		IAI47_12285	0.86	-0.6
2,597,955	-		IAI47_12285	0.86	-1.8
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