Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09930 and PGA1_c09950 are separated by 4 nucleotides PGA1_c09950 and PGA1_c09960 are separated by 99 nucleotides PGA1_c09960 and PGA1_c09970 are separated by 38 nucleotides
PGA1_c09930: PGA1_c09930 - isoquinoline 1-oxidoreductase subunit beta, at 1,026,937 to 1,029,177
_c09930
PGA1_c09950: PGA1_c09950 - isoquinoline 1-oxidoreductase subunit alpha, at 1,029,182 to 1,029,646
_c09950
PGA1_c09960: PGA1_c09960 - putative transcriptional regulator, TetR family, at 1,029,746 to 1,030,327
_c09960
PGA1_c09970: PGA1_c09970 - tryptophan 2,3-dioxygenase KynA, at 1,030,366 to 1,031,199
_c09970
Position (kb)
1029
1030 Strain fitness (log2 ratio)
-2
-1
0
1 at 1028.225 kb on - strand, within PGA1_c09930 at 1028.248 kb on - strand, within PGA1_c09930 at 1028.272 kb on + strand, within PGA1_c09930 at 1028.296 kb on - strand, within PGA1_c09930 at 1028.304 kb on - strand, within PGA1_c09930 at 1028.350 kb on + strand, within PGA1_c09930 at 1028.358 kb on - strand, within PGA1_c09930 at 1028.465 kb on - strand, within PGA1_c09930 at 1028.521 kb on + strand, within PGA1_c09930 at 1028.633 kb on + strand, within PGA1_c09930 at 1028.641 kb on - strand, within PGA1_c09930 at 1028.641 kb on - strand, within PGA1_c09930 at 1028.839 kb on + strand, within PGA1_c09930 at 1028.850 kb on + strand, within PGA1_c09930 at 1028.858 kb on - strand, within PGA1_c09930 at 1028.886 kb on - strand, within PGA1_c09930 at 1028.896 kb on + strand, within PGA1_c09930 at 1028.896 kb on - strand, within PGA1_c09930 at 1028.987 kb on - strand at 1028.990 kb on + strand at 1029.000 kb on + strand at 1029.032 kb on + strand at 1029.034 kb on + strand at 1029.260 kb on + strand, within PGA1_c09950 at 1029.303 kb on - strand, within PGA1_c09950 at 1029.340 kb on - strand, within PGA1_c09950 at 1029.355 kb on - strand, within PGA1_c09950 at 1029.378 kb on + strand, within PGA1_c09950 at 1029.378 kb on + strand, within PGA1_c09950 at 1029.400 kb on + strand, within PGA1_c09950 at 1029.422 kb on - strand, within PGA1_c09950 at 1029.424 kb on + strand, within PGA1_c09950 at 1029.474 kb on - strand, within PGA1_c09950 at 1029.601 kb on + strand at 1029.629 kb on - strand at 1029.910 kb on + strand, within PGA1_c09960 at 1029.917 kb on + strand, within PGA1_c09960 at 1029.945 kb on + strand, within PGA1_c09960 at 1029.965 kb on + strand, within PGA1_c09960 at 1029.981 kb on - strand, within PGA1_c09960 at 1030.123 kb on - strand, within PGA1_c09960 at 1030.202 kb on - strand, within PGA1_c09960 at 1030.248 kb on + strand, within PGA1_c09960 at 1030.322 kb on + strand at 1030.448 kb on - strand at 1030.590 kb on - strand, within PGA1_c09970 at 1030.625 kb on + strand, within PGA1_c09970 at 1030.625 kb on - strand, within PGA1_c09970 at 1030.633 kb on - strand, within PGA1_c09970
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 1,028,225 - PGA1_c09930 0.57 +0.5 1,028,248 - PGA1_c09930 0.59 +0.0 1,028,272 + PGA1_c09930 0.60 +0.1 1,028,296 - PGA1_c09930 0.61 +0.1 1,028,304 - PGA1_c09930 0.61 +0.4 1,028,350 + PGA1_c09930 0.63 +0.3 1,028,358 - PGA1_c09930 0.63 -0.7 1,028,465 - PGA1_c09930 0.68 +1.2 1,028,521 + PGA1_c09930 0.71 -1.2 1,028,633 + PGA1_c09930 0.76 +0.8 1,028,641 - PGA1_c09930 0.76 -0.4 1,028,641 - PGA1_c09930 0.76 -0.6 1,028,839 + PGA1_c09930 0.85 -0.3 1,028,850 + PGA1_c09930 0.85 -2.2 1,028,858 - PGA1_c09930 0.86 +0.0 1,028,886 - PGA1_c09930 0.87 +1.0 1,028,896 + PGA1_c09930 0.87 -0.8 1,028,896 - PGA1_c09930 0.87 +0.4 1,028,987 - +0.2 1,028,990 + -0.3 1,029,000 + -0.2 1,029,032 + +0.4 1,029,034 + +0.3 1,029,260 + PGA1_c09950 0.17 -0.8 1,029,303 - PGA1_c09950 0.26 -0.2 1,029,340 - PGA1_c09950 0.34 -1.1 1,029,355 - PGA1_c09950 0.37 -0.3 1,029,378 + PGA1_c09950 0.42 -0.6 1,029,378 + PGA1_c09950 0.42 +0.1 1,029,400 + PGA1_c09950 0.47 -0.1 1,029,422 - PGA1_c09950 0.52 -0.1 1,029,424 + PGA1_c09950 0.52 -0.8 1,029,474 - PGA1_c09950 0.63 +0.1 1,029,601 + -0.1 1,029,629 - +0.6 1,029,910 + PGA1_c09960 0.28 -1.2 1,029,917 + PGA1_c09960 0.29 +0.5 1,029,945 + PGA1_c09960 0.34 +0.7 1,029,965 + PGA1_c09960 0.38 +1.3 1,029,981 - PGA1_c09960 0.40 +0.6 1,030,123 - PGA1_c09960 0.65 -0.2 1,030,202 - PGA1_c09960 0.78 -0.5 1,030,248 + PGA1_c09960 0.86 +0.5 1,030,322 + +0.1 1,030,448 - -0.1 1,030,590 - PGA1_c09970 0.27 -1.0 1,030,625 + PGA1_c09970 0.31 +0.4 1,030,625 - PGA1_c09970 0.31 +0.1 1,030,633 - PGA1_c09970 0.32 +0.1
Or see this region's nucleotide sequence