Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c03630 and PGA1_c03640 are separated by 337 nucleotides PGA1_c03640 and PGA1_c03650 are separated by 104 nucleotides
PGA1_c03630: PGA1_c03630 - succinyl-CoA ligase [ADP-forming] subunit beta, at 350,241 to 351,434
_c03630
PGA1_c03640: PGA1_c03640 - Predicted ATPase, at 351,772 to 352,320
_c03640
PGA1_c03650: PGA1_c03650 - malate dehydrogenase Mdh, at 352,425 to 353,387
_c03650
Position (kb) 351
352
353 Strain fitness (log2 ratio) -2
-1
0
1 at 351.635 kb on - strand at 351.635 kb on - strand at 351.638 kb on + strand at 351.638 kb on + strand at 351.638 kb on + strand at 351.638 kb on + strand at 351.638 kb on + strand at 351.638 kb on + strand at 351.638 kb on + strand at 351.646 kb on - strand at 351.646 kb on - strand at 351.646 kb on - strand at 351.646 kb on - strand at 351.646 kb on - strand at 351.646 kb on - strand at 351.646 kb on - strand at 351.648 kb on + strand at 351.672 kb on - strand at 351.697 kb on - strand at 351.704 kb on + strand at 351.746 kb on + strand at 351.754 kb on - strand at 351.756 kb on + strand at 351.764 kb on - strand at 351.783 kb on + strand at 351.791 kb on - strand at 351.791 kb on - strand at 351.860 kb on - strand, within PGA1_c03640 at 351.882 kb on - strand, within PGA1_c03640 at 351.936 kb on - strand, within PGA1_c03640 at 351.973 kb on + strand, within PGA1_c03640 at 351.988 kb on + strand, within PGA1_c03640 at 351.996 kb on - strand, within PGA1_c03640 at 351.999 kb on + strand, within PGA1_c03640 at 352.006 kb on + strand, within PGA1_c03640 at 352.094 kb on + strand, within PGA1_c03640 at 352.094 kb on + strand, within PGA1_c03640 at 352.094 kb on + strand, within PGA1_c03640 at 352.094 kb on + strand, within PGA1_c03640 at 352.094 kb on + strand, within PGA1_c03640 at 352.094 kb on + strand, within PGA1_c03640 at 352.102 kb on - strand, within PGA1_c03640 at 352.115 kb on + strand, within PGA1_c03640 at 352.171 kb on - strand, within PGA1_c03640 at 352.184 kb on + strand, within PGA1_c03640 at 352.184 kb on + strand, within PGA1_c03640 at 352.192 kb on - strand, within PGA1_c03640 at 352.203 kb on + strand, within PGA1_c03640 at 352.204 kb on + strand, within PGA1_c03640 at 352.208 kb on + strand, within PGA1_c03640 at 352.266 kb on + strand at 352.313 kb on - strand at 352.327 kb on + strand at 352.375 kb on - strand at 352.385 kb on + strand at 352.419 kb on - strand at 352.419 kb on - strand at 352.419 kb on - strand at 352.419 kb on - strand at 352.424 kb on - strand at 352.440 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 351,635 - +0.1 351,635 - +0.3 351,638 + +1.1 351,638 + -1.1 351,638 + +0.2 351,638 + +0.1 351,638 + +0.0 351,638 + -0.1 351,638 + -0.6 351,646 - +0.0 351,646 - +0.2 351,646 - -2.1 351,646 - +0.1 351,646 - -0.7 351,646 - -0.7 351,646 - +0.3 351,648 + -0.2 351,672 - +0.0 351,697 - +0.1 351,704 + -1.2 351,746 + -0.9 351,754 - -0.7 351,756 + +0.1 351,764 - -0.3 351,783 + -0.8 351,791 - -0.6 351,791 - -0.3 351,860 - PGA1_c03640 0.16 +0.6 351,882 - PGA1_c03640 0.20 -0.7 351,936 - PGA1_c03640 0.30 +0.1 351,973 + PGA1_c03640 0.37 -1.5 351,988 + PGA1_c03640 0.39 -0.4 351,996 - PGA1_c03640 0.41 -0.6 351,999 + PGA1_c03640 0.41 +0.5 352,006 + PGA1_c03640 0.43 +0.3 352,094 + PGA1_c03640 0.59 -1.1 352,094 + PGA1_c03640 0.59 -1.5 352,094 + PGA1_c03640 0.59 -0.4 352,094 + PGA1_c03640 0.59 +0.2 352,094 + PGA1_c03640 0.59 +1.2 352,094 + PGA1_c03640 0.59 -0.3 352,102 - PGA1_c03640 0.60 -1.9 352,115 + PGA1_c03640 0.62 -0.8 352,171 - PGA1_c03640 0.73 -0.9 352,184 + PGA1_c03640 0.75 -0.5 352,184 + PGA1_c03640 0.75 +0.1 352,192 - PGA1_c03640 0.77 -0.1 352,203 + PGA1_c03640 0.79 -0.1 352,204 + PGA1_c03640 0.79 +0.3 352,208 + PGA1_c03640 0.79 -0.4 352,266 + +1.6 352,313 - -0.2 352,327 + +1.0 352,375 - +0.5 352,385 + +0.8 352,419 - +0.2 352,419 - +0.2 352,419 - +0.2 352,419 - -0.2 352,424 - -1.5 352,440 + -1.7
Or see this region's nucleotide sequence