Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c28020 and PGA1_c28030 overlap by 4 nucleotides PGA1_c28030 and PGA1_c28040 overlap by 4 nucleotides PGA1_c28040 and PGA1_c28050 overlap by 1 nucleotides
PGA1_c28020: PGA1_c28020 - fructokinase Frk, at 2,922,811 to 2,923,782
_c28020
PGA1_c28030: PGA1_c28030 - Panthothenate kinase, at 2,923,779 to 2,924,423
_c28030
PGA1_c28040: PGA1_c28040 - ABC transporter ATP-binding protein, at 2,924,420 to 2,925,196
_c28040
PGA1_c28050: PGA1_c28050 - putative sugar transport system, permease protein, at 2,925,196 to 2,926,257
_c28050
Position (kb)
2923
2924
2925 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2922.798 kb on - strand at 2922.798 kb on - strand at 2922.888 kb on + strand at 2922.998 kb on + strand, within PGA1_c28020 at 2923.034 kb on - strand, within PGA1_c28020 at 2923.084 kb on + strand, within PGA1_c28020 at 2923.112 kb on - strand, within PGA1_c28020 at 2923.112 kb on - strand, within PGA1_c28020 at 2923.181 kb on - strand, within PGA1_c28020 at 2923.181 kb on - strand, within PGA1_c28020 at 2923.191 kb on - strand, within PGA1_c28020 at 2923.211 kb on + strand, within PGA1_c28020 at 2923.219 kb on - strand, within PGA1_c28020 at 2923.256 kb on + strand, within PGA1_c28020 at 2923.264 kb on - strand, within PGA1_c28020 at 2923.284 kb on + strand, within PGA1_c28020 at 2923.284 kb on + strand, within PGA1_c28020 at 2923.284 kb on + strand, within PGA1_c28020 at 2923.302 kb on - strand, within PGA1_c28020 at 2923.345 kb on - strand, within PGA1_c28020 at 2923.408 kb on - strand, within PGA1_c28020 at 2923.473 kb on + strand, within PGA1_c28020 at 2923.481 kb on - strand, within PGA1_c28020 at 2923.514 kb on - strand, within PGA1_c28020 at 2923.516 kb on - strand, within PGA1_c28020 at 2923.537 kb on + strand, within PGA1_c28020 at 2923.545 kb on - strand, within PGA1_c28020 at 2923.636 kb on + strand, within PGA1_c28020 at 2923.654 kb on + strand, within PGA1_c28020 at 2923.693 kb on - strand at 2923.772 kb on - strand at 2923.772 kb on - strand at 2923.772 kb on - strand at 2923.826 kb on - strand at 2923.848 kb on - strand, within PGA1_c28030 at 2923.848 kb on - strand, within PGA1_c28030 at 2923.954 kb on - strand, within PGA1_c28030 at 2924.055 kb on - strand, within PGA1_c28030 at 2924.109 kb on - strand, within PGA1_c28030 at 2924.125 kb on + strand, within PGA1_c28030 at 2924.177 kb on - strand, within PGA1_c28030 at 2924.181 kb on + strand, within PGA1_c28030 at 2924.233 kb on - strand, within PGA1_c28030 at 2924.233 kb on - strand, within PGA1_c28030 at 2924.259 kb on + strand, within PGA1_c28030 at 2924.355 kb on + strand, within PGA1_c28030 at 2924.429 kb on + strand at 2924.438 kb on + strand at 2924.449 kb on + strand at 2924.457 kb on - strand at 2924.494 kb on + strand at 2924.553 kb on + strand, within PGA1_c28040 at 2924.576 kb on - strand, within PGA1_c28040 at 2924.582 kb on + strand, within PGA1_c28040 at 2924.637 kb on + strand, within PGA1_c28040 at 2924.643 kb on - strand, within PGA1_c28040 at 2924.655 kb on - strand, within PGA1_c28040 at 2924.673 kb on - strand, within PGA1_c28040 at 2924.722 kb on - strand, within PGA1_c28040 at 2924.722 kb on - strand, within PGA1_c28040 at 2924.727 kb on + strand, within PGA1_c28040 at 2924.729 kb on - strand, within PGA1_c28040 at 2924.729 kb on - strand, within PGA1_c28040 at 2924.735 kb on - strand, within PGA1_c28040 at 2924.749 kb on + strand, within PGA1_c28040 at 2924.750 kb on - strand, within PGA1_c28040 at 2924.815 kb on - strand, within PGA1_c28040 at 2924.871 kb on + strand, within PGA1_c28040 at 2924.871 kb on + strand, within PGA1_c28040 at 2924.879 kb on - strand, within PGA1_c28040 at 2924.879 kb on - strand, within PGA1_c28040 at 2924.879 kb on - strand, within PGA1_c28040 at 2924.935 kb on - strand, within PGA1_c28040 at 2924.957 kb on - strand, within PGA1_c28040 at 2925.000 kb on - strand, within PGA1_c28040 at 2925.004 kb on + strand, within PGA1_c28040 at 2925.009 kb on + strand, within PGA1_c28040 at 2925.012 kb on - strand, within PGA1_c28040 at 2925.016 kb on + strand, within PGA1_c28040 at 2925.017 kb on - strand, within PGA1_c28040 at 2925.104 kb on - strand, within PGA1_c28040 at 2925.110 kb on + strand, within PGA1_c28040 at 2925.146 kb on + strand at 2925.158 kb on - strand at 2925.159 kb on + strand at 2925.163 kb on + strand at 2925.199 kb on + strand at 2925.300 kb on + strand at 2925.300 kb on + strand at 2925.308 kb on - strand, within PGA1_c28050 at 2925.308 kb on - strand, within PGA1_c28050 at 2925.308 kb on - strand, within PGA1_c28050 at 2925.308 kb on - strand, within PGA1_c28050 at 2925.348 kb on + strand, within PGA1_c28050 at 2925.413 kb on - strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050 at 2925.423 kb on + strand, within PGA1_c28050
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 2,922,798 - +0.4 2,922,798 - -0.3 2,922,888 + +0.3 2,922,998 + PGA1_c28020 0.19 -0.5 2,923,034 - PGA1_c28020 0.23 +0.1 2,923,084 + PGA1_c28020 0.28 -0.3 2,923,112 - PGA1_c28020 0.31 -1.6 2,923,112 - PGA1_c28020 0.31 -0.3 2,923,181 - PGA1_c28020 0.38 -0.7 2,923,181 - PGA1_c28020 0.38 +0.2 2,923,191 - PGA1_c28020 0.39 +0.7 2,923,211 + PGA1_c28020 0.41 -1.1 2,923,219 - PGA1_c28020 0.42 -1.1 2,923,256 + PGA1_c28020 0.46 +2.2 2,923,264 - PGA1_c28020 0.47 -0.3 2,923,284 + PGA1_c28020 0.49 -0.8 2,923,284 + PGA1_c28020 0.49 +1.1 2,923,284 + PGA1_c28020 0.49 -1.0 2,923,302 - PGA1_c28020 0.51 -0.2 2,923,345 - PGA1_c28020 0.55 -0.2 2,923,408 - PGA1_c28020 0.61 +1.3 2,923,473 + PGA1_c28020 0.68 -0.8 2,923,481 - PGA1_c28020 0.69 +0.4 2,923,514 - PGA1_c28020 0.72 -0.8 2,923,516 - PGA1_c28020 0.73 -0.0 2,923,537 + PGA1_c28020 0.75 +0.8 2,923,545 - PGA1_c28020 0.76 -0.4 2,923,636 + PGA1_c28020 0.85 -1.8 2,923,654 + PGA1_c28020 0.87 +0.1 2,923,693 - -0.0 2,923,772 - +0.8 2,923,772 - -0.1 2,923,772 - -0.3 2,923,826 - +0.3 2,923,848 - PGA1_c28030 0.11 +0.3 2,923,848 - PGA1_c28030 0.11 +1.2 2,923,954 - PGA1_c28030 0.27 +0.4 2,924,055 - PGA1_c28030 0.43 -0.4 2,924,109 - PGA1_c28030 0.51 +0.1 2,924,125 + PGA1_c28030 0.54 -2.1 2,924,177 - PGA1_c28030 0.62 +0.4 2,924,181 + PGA1_c28030 0.62 +0.5 2,924,233 - PGA1_c28030 0.70 +0.2 2,924,233 - PGA1_c28030 0.70 -0.4 2,924,259 + PGA1_c28030 0.74 +0.8 2,924,355 + PGA1_c28030 0.89 +0.7 2,924,429 + -1.2 2,924,438 + -0.4 2,924,449 + +0.0 2,924,457 - +0.6 2,924,494 + -1.1 2,924,553 + PGA1_c28040 0.17 +0.5 2,924,576 - PGA1_c28040 0.20 -1.3 2,924,582 + PGA1_c28040 0.21 +1.0 2,924,637 + PGA1_c28040 0.28 -0.1 2,924,643 - PGA1_c28040 0.29 +0.2 2,924,655 - PGA1_c28040 0.30 -0.3 2,924,673 - PGA1_c28040 0.33 +0.2 2,924,722 - PGA1_c28040 0.39 +1.8 2,924,722 - PGA1_c28040 0.39 +0.5 2,924,727 + PGA1_c28040 0.40 +0.3 2,924,729 - PGA1_c28040 0.40 -0.2 2,924,729 - PGA1_c28040 0.40 -0.1 2,924,735 - PGA1_c28040 0.41 +0.9 2,924,749 + PGA1_c28040 0.42 -1.1 2,924,750 - PGA1_c28040 0.42 +0.2 2,924,815 - PGA1_c28040 0.51 +0.1 2,924,871 + PGA1_c28040 0.58 -0.7 2,924,871 + PGA1_c28040 0.58 +0.2 2,924,879 - PGA1_c28040 0.59 -0.4 2,924,879 - PGA1_c28040 0.59 +1.4 2,924,879 - PGA1_c28040 0.59 +0.3 2,924,935 - PGA1_c28040 0.66 -0.4 2,924,957 - PGA1_c28040 0.69 +1.0 2,925,000 - PGA1_c28040 0.75 +2.0 2,925,004 + PGA1_c28040 0.75 -0.2 2,925,009 + PGA1_c28040 0.76 -1.3 2,925,012 - PGA1_c28040 0.76 -0.3 2,925,016 + PGA1_c28040 0.77 -0.2 2,925,017 - PGA1_c28040 0.77 -1.5 2,925,104 - PGA1_c28040 0.88 -0.4 2,925,110 + PGA1_c28040 0.89 +0.9 2,925,146 + -0.3 2,925,158 - -0.1 2,925,159 + +0.6 2,925,163 + +0.4 2,925,199 + +0.8 2,925,300 + -0.9 2,925,300 + -0.0 2,925,308 - PGA1_c28050 0.11 -0.2 2,925,308 - PGA1_c28050 0.11 -0.6 2,925,308 - PGA1_c28050 0.11 +1.3 2,925,308 - PGA1_c28050 0.11 +1.3 2,925,348 + PGA1_c28050 0.14 +0.6 2,925,413 - PGA1_c28050 0.20 +0.7 2,925,423 + PGA1_c28050 0.21 -1.9 2,925,423 + PGA1_c28050 0.21 -0.3 2,925,423 + PGA1_c28050 0.21 +0.4 2,925,423 + PGA1_c28050 0.21 -0.0 2,925,423 + PGA1_c28050 0.21 -0.1 2,925,423 + PGA1_c28050 0.21 -0.7 2,925,423 + PGA1_c28050 0.21 +0.9 2,925,423 + PGA1_c28050 0.21 -0.9 2,925,423 + PGA1_c28050 0.21 +0.5 2,925,423 + PGA1_c28050 0.21 -0.8 2,925,423 + PGA1_c28050 0.21 -0.6 2,925,423 + PGA1_c28050 0.21 -0.6 2,925,423 + PGA1_c28050 0.21 +0.2 2,925,423 + PGA1_c28050 0.21 +0.1 2,925,423 + PGA1_c28050 0.21 -1.1 2,925,423 + PGA1_c28050 0.21 -1.7 2,925,423 + PGA1_c28050 0.21 +0.1
Or see this region's nucleotide sequence