Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21840 and PGA1_c21850 are separated by 130 nucleotides PGA1_c21850 and PGA1_c21860 are separated by 112 nucleotides PGA1_c21860 and PGA1_c21870 are separated by 107 nucleotides
PGA1_c21840: PGA1_c21840 - guanine deaminase GuaD, at 2,266,006 to 2,267,292
_c21840
PGA1_c21850: PGA1_c21850 - putative hydroxydechloroatrazine ethylaminohydrolase, at 2,267,423 to 2,268,763
_c21850
PGA1_c21860: PGA1_c21860 - Histidinol-phosphatase [alternative form] (EC 3.1.3.15) (from data) , at 2,268,876 to 2,269,628
_c21860
PGA1_c21870: PGA1_c21870 - transcriptional regulator, at 2,269,736 to 2,270,107
_c21870
Position (kb)
2267
2268
2269 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2266.463 kb on - strand, within PGA1_c21840 at 2266.480 kb on + strand, within PGA1_c21840 at 2266.480 kb on + strand, within PGA1_c21840 at 2266.521 kb on - strand, within PGA1_c21840 at 2266.526 kb on - strand, within PGA1_c21840 at 2266.598 kb on - strand, within PGA1_c21840 at 2266.611 kb on + strand, within PGA1_c21840 at 2266.664 kb on - strand, within PGA1_c21840 at 2266.679 kb on + strand, within PGA1_c21840 at 2266.679 kb on + strand, within PGA1_c21840 at 2266.684 kb on + strand, within PGA1_c21840 at 2266.687 kb on - strand, within PGA1_c21840 at 2266.693 kb on + strand, within PGA1_c21840 at 2266.774 kb on - strand, within PGA1_c21840 at 2266.774 kb on - strand, within PGA1_c21840 at 2266.901 kb on + strand, within PGA1_c21840 at 2266.901 kb on + strand, within PGA1_c21840 at 2266.909 kb on - strand, within PGA1_c21840 at 2267.013 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.097 kb on + strand, within PGA1_c21840 at 2267.195 kb on - strand at 2267.288 kb on + strand at 2267.296 kb on - strand at 2267.310 kb on + strand at 2267.379 kb on + strand at 2267.407 kb on + strand at 2267.421 kb on + strand at 2267.421 kb on + strand at 2267.440 kb on + strand at 2267.548 kb on + strand at 2267.561 kb on - strand, within PGA1_c21850 at 2267.599 kb on - strand, within PGA1_c21850 at 2267.677 kb on + strand, within PGA1_c21850 at 2267.680 kb on - strand, within PGA1_c21850 at 2267.718 kb on - strand, within PGA1_c21850 at 2267.748 kb on - strand, within PGA1_c21850 at 2267.829 kb on + strand, within PGA1_c21850 at 2267.829 kb on + strand, within PGA1_c21850 at 2267.837 kb on - strand, within PGA1_c21850 at 2267.980 kb on + strand, within PGA1_c21850 at 2267.996 kb on + strand, within PGA1_c21850 at 2268.004 kb on - strand, within PGA1_c21850 at 2268.088 kb on + strand, within PGA1_c21850 at 2268.096 kb on + strand, within PGA1_c21850 at 2268.104 kb on - strand, within PGA1_c21850 at 2268.104 kb on - strand, within PGA1_c21850 at 2268.141 kb on - strand, within PGA1_c21850 at 2268.159 kb on - strand, within PGA1_c21850 at 2268.387 kb on + strand, within PGA1_c21850 at 2268.387 kb on + strand, within PGA1_c21850 at 2268.387 kb on + strand, within PGA1_c21850 at 2268.387 kb on + strand, within PGA1_c21850 at 2268.395 kb on - strand, within PGA1_c21850 at 2268.402 kb on - strand, within PGA1_c21850 at 2268.428 kb on - strand, within PGA1_c21850 at 2268.521 kb on - strand, within PGA1_c21850 at 2268.564 kb on - strand, within PGA1_c21850 at 2268.564 kb on - strand, within PGA1_c21850 at 2268.587 kb on - strand, within PGA1_c21850 at 2268.587 kb on - strand, within PGA1_c21850 at 2268.587 kb on - strand, within PGA1_c21850 at 2268.715 kb on + strand at 2268.798 kb on + strand at 2268.801 kb on + strand at 2268.814 kb on + strand at 2268.818 kb on + strand at 2268.826 kb on - strand at 2268.851 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 2,266,463 - PGA1_c21840 0.36 -0.7 2,266,480 + PGA1_c21840 0.37 -0.9 2,266,480 + PGA1_c21840 0.37 -0.2 2,266,521 - PGA1_c21840 0.40 +0.8 2,266,526 - PGA1_c21840 0.40 +0.1 2,266,598 - PGA1_c21840 0.46 +0.2 2,266,611 + PGA1_c21840 0.47 -0.1 2,266,664 - PGA1_c21840 0.51 -1.2 2,266,679 + PGA1_c21840 0.52 +0.6 2,266,679 + PGA1_c21840 0.52 -0.8 2,266,684 + PGA1_c21840 0.53 -0.2 2,266,687 - PGA1_c21840 0.53 -1.4 2,266,693 + PGA1_c21840 0.53 -0.3 2,266,774 - PGA1_c21840 0.60 -0.2 2,266,774 - PGA1_c21840 0.60 -0.8 2,266,901 + PGA1_c21840 0.70 -1.1 2,266,901 + PGA1_c21840 0.70 +0.6 2,266,909 - PGA1_c21840 0.70 -0.2 2,267,013 + PGA1_c21840 0.78 -0.4 2,267,097 + PGA1_c21840 0.85 -1.1 2,267,097 + PGA1_c21840 0.85 +0.7 2,267,097 + PGA1_c21840 0.85 +0.1 2,267,097 + PGA1_c21840 0.85 +0.1 2,267,097 + PGA1_c21840 0.85 -1.3 2,267,097 + PGA1_c21840 0.85 -1.1 2,267,097 + PGA1_c21840 0.85 -0.5 2,267,097 + PGA1_c21840 0.85 -1.4 2,267,195 - -0.6 2,267,288 + +0.1 2,267,296 - -0.2 2,267,310 + +0.8 2,267,379 + +1.2 2,267,407 + -1.4 2,267,421 + +0.2 2,267,421 + +0.1 2,267,440 + -0.5 2,267,548 + +0.1 2,267,561 - PGA1_c21850 0.10 -0.4 2,267,599 - PGA1_c21850 0.13 +0.5 2,267,677 + PGA1_c21850 0.19 +0.5 2,267,680 - PGA1_c21850 0.19 +0.2 2,267,718 - PGA1_c21850 0.22 +0.0 2,267,748 - PGA1_c21850 0.24 +0.1 2,267,829 + PGA1_c21850 0.30 +0.5 2,267,829 + PGA1_c21850 0.30 +0.9 2,267,837 - PGA1_c21850 0.31 +2.0 2,267,980 + PGA1_c21850 0.42 -0.4 2,267,996 + PGA1_c21850 0.43 +2.0 2,268,004 - PGA1_c21850 0.43 +0.6 2,268,088 + PGA1_c21850 0.50 +0.7 2,268,096 + PGA1_c21850 0.50 +1.2 2,268,104 - PGA1_c21850 0.51 -0.6 2,268,104 - PGA1_c21850 0.51 +0.1 2,268,141 - PGA1_c21850 0.54 +0.6 2,268,159 - PGA1_c21850 0.55 +1.0 2,268,387 + PGA1_c21850 0.72 +0.2 2,268,387 + PGA1_c21850 0.72 +0.2 2,268,387 + PGA1_c21850 0.72 -0.8 2,268,387 + PGA1_c21850 0.72 -1.0 2,268,395 - PGA1_c21850 0.72 -0.7 2,268,402 - PGA1_c21850 0.73 +0.6 2,268,428 - PGA1_c21850 0.75 +1.5 2,268,521 - PGA1_c21850 0.82 -0.1 2,268,564 - PGA1_c21850 0.85 +0.4 2,268,564 - PGA1_c21850 0.85 -0.3 2,268,587 - PGA1_c21850 0.87 +0.1 2,268,587 - PGA1_c21850 0.87 +0.3 2,268,587 - PGA1_c21850 0.87 +1.8 2,268,715 + -2.2 2,268,798 + -0.9 2,268,801 + -0.1 2,268,814 + -0.3 2,268,818 + -0.2 2,268,826 - -0.6 2,268,851 - +0.5
Or see this region's nucleotide sequence