Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c10560 and PGA1_c10570 are separated by 15 nucleotides PGA1_c10570 and PGA1_c10580 overlap by 11 nucleotides PGA1_c10580 and PGA1_c10585 are separated by 187 nucleotides PGA1_c10585 and PGA1_c10590 are separated by 223 nucleotides
PGA1_c10560: PGA1_c10560 - biotin-[acetyl-CoA-carboxylase] synthetase BirA, at 1,092,299 to 1,093,048
_c10560
PGA1_c10570: PGA1_c10570 - type III pantothenate kinase CoaX, at 1,093,064 to 1,093,852
_c10570
PGA1_c10580: PGA1_c10580 - ribonuclease J 1, at 1,093,842 to 1,095,509
_c10580
PGA1_c10585: PGA1_c10585 - hypothetical protein, at 1,095,697 to 1,095,870
_c10585
PGA1_c10590: PGA1_c10590 - putative ATP-dependent RNA helicase RhlE, at 1,096,094 to 1,097,644
_c10590
Position (kb)
1093
1094
1095
1096 Strain fitness (log2 ratio)
-1
0
1
2 at 1093.825 kb on + strand at 1093.825 kb on + strand at 1093.854 kb on - strand at 1093.854 kb on - strand at 1093.854 kb on - strand at 1093.916 kb on - strand at 1094.006 kb on - strand at 1094.006 kb on - strand at 1094.006 kb on - strand at 1094.045 kb on + strand, within PGA1_c10580 at 1094.045 kb on + strand, within PGA1_c10580 at 1094.053 kb on - strand, within PGA1_c10580 at 1094.078 kb on + strand, within PGA1_c10580 at 1094.113 kb on + strand, within PGA1_c10580 at 1094.181 kb on + strand, within PGA1_c10580 at 1094.181 kb on + strand, within PGA1_c10580 at 1094.206 kb on - strand, within PGA1_c10580 at 1094.218 kb on + strand, within PGA1_c10580 at 1094.316 kb on - strand, within PGA1_c10580 at 1094.751 kb on + strand, within PGA1_c10580 at 1094.800 kb on + strand, within PGA1_c10580 at 1095.232 kb on + strand, within PGA1_c10580 at 1095.232 kb on + strand, within PGA1_c10580 at 1095.323 kb on + strand, within PGA1_c10580 at 1095.323 kb on + strand, within PGA1_c10580 at 1095.338 kb on + strand, within PGA1_c10580 at 1095.338 kb on + strand, within PGA1_c10580 at 1095.346 kb on - strand at 1095.387 kb on + strand at 1095.494 kb on - strand at 1095.529 kb on + strand at 1095.589 kb on + strand at 1095.767 kb on - strand, within PGA1_c10585 at 1095.816 kb on + strand, within PGA1_c10585 at 1095.822 kb on - strand, within PGA1_c10585 at 1095.822 kb on - strand, within PGA1_c10585 at 1095.822 kb on - strand, within PGA1_c10585 at 1095.915 kb on - strand at 1095.926 kb on - strand at 1096.106 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 1,093,825 + +0.2 1,093,825 + +0.6 1,093,854 - +0.2 1,093,854 - +0.3 1,093,854 - -0.2 1,093,916 - +0.0 1,094,006 - +0.5 1,094,006 - +0.8 1,094,006 - -0.7 1,094,045 + PGA1_c10580 0.12 -1.0 1,094,045 + PGA1_c10580 0.12 +1.0 1,094,053 - PGA1_c10580 0.13 +1.8 1,094,078 + PGA1_c10580 0.14 +0.1 1,094,113 + PGA1_c10580 0.16 +0.7 1,094,181 + PGA1_c10580 0.20 +0.3 1,094,181 + PGA1_c10580 0.20 +0.6 1,094,206 - PGA1_c10580 0.22 +0.5 1,094,218 + PGA1_c10580 0.23 -0.7 1,094,316 - PGA1_c10580 0.28 +0.2 1,094,751 + PGA1_c10580 0.54 -0.5 1,094,800 + PGA1_c10580 0.57 +1.5 1,095,232 + PGA1_c10580 0.83 +0.6 1,095,232 + PGA1_c10580 0.83 +0.5 1,095,323 + PGA1_c10580 0.89 +1.0 1,095,323 + PGA1_c10580 0.89 +0.3 1,095,338 + PGA1_c10580 0.90 +0.8 1,095,338 + PGA1_c10580 0.90 -1.1 1,095,346 - -0.2 1,095,387 + +1.4 1,095,494 - -1.7 1,095,529 + -1.4 1,095,589 + +1.3 1,095,767 - PGA1_c10585 0.40 -0.7 1,095,816 + PGA1_c10585 0.68 -0.6 1,095,822 - PGA1_c10585 0.72 -0.3 1,095,822 - PGA1_c10585 0.72 +0.6 1,095,822 - PGA1_c10585 0.72 -0.3 1,095,915 - -0.3 1,095,926 - -0.0 1,096,106 + +0.1
Or see this region's nucleotide sequence