Experiment: LB, pH9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03675 and BWI76_RS03680 overlap by 11 nucleotides BWI76_RS03680 and BWI76_RS03685 are separated by 63 nucleotides
BWI76_RS03675: BWI76_RS03675 - restriction modification system DNA specificity domain-containing protein, at 761,928 to 763,247
_RS03675
BWI76_RS03680: BWI76_RS03680 - DNA methyltransferase, at 763,237 to 764,856
_RS03680
BWI76_RS03685: BWI76_RS03685 - restriction endonuclease, at 764,920 to 766,086
_RS03685
Position (kb) 763
764
765 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 762.447 kb on - strand, within BWI76_RS03675 at 762.451 kb on + strand, within BWI76_RS03675 at 762.464 kb on + strand, within BWI76_RS03675 at 762.485 kb on + strand, within BWI76_RS03675 at 762.485 kb on + strand, within BWI76_RS03675 at 762.493 kb on - strand, within BWI76_RS03675 at 762.493 kb on - strand, within BWI76_RS03675 at 762.493 kb on - strand at 762.493 kb on - strand, within BWI76_RS03675 at 762.570 kb on + strand, within BWI76_RS03675 at 762.595 kb on + strand, within BWI76_RS03675 at 762.603 kb on - strand, within BWI76_RS03675 at 762.603 kb on - strand, within BWI76_RS03675 at 762.605 kb on + strand, within BWI76_RS03675 at 762.613 kb on - strand, within BWI76_RS03675 at 762.615 kb on - strand, within BWI76_RS03675 at 762.626 kb on - strand, within BWI76_RS03675 at 762.716 kb on - strand, within BWI76_RS03675 at 762.728 kb on - strand, within BWI76_RS03675 at 762.739 kb on - strand, within BWI76_RS03675 at 762.739 kb on - strand, within BWI76_RS03675 at 762.739 kb on - strand, within BWI76_RS03675 at 762.769 kb on - strand, within BWI76_RS03675 at 762.769 kb on - strand, within BWI76_RS03675 at 762.776 kb on + strand, within BWI76_RS03675 at 762.784 kb on - strand, within BWI76_RS03675 at 762.784 kb on - strand, within BWI76_RS03675 at 762.784 kb on - strand, within BWI76_RS03675 at 762.790 kb on - strand, within BWI76_RS03675 at 762.808 kb on - strand, within BWI76_RS03675 at 762.834 kb on - strand, within BWI76_RS03675 at 762.839 kb on - strand, within BWI76_RS03675 at 762.839 kb on - strand, within BWI76_RS03675 at 762.880 kb on + strand, within BWI76_RS03675 at 762.888 kb on - strand, within BWI76_RS03675 at 762.907 kb on - strand, within BWI76_RS03675 at 762.923 kb on - strand, within BWI76_RS03675 at 762.932 kb on - strand, within BWI76_RS03675 at 762.933 kb on - strand, within BWI76_RS03675 at 762.939 kb on - strand, within BWI76_RS03675 at 762.988 kb on - strand, within BWI76_RS03675 at 763.000 kb on - strand, within BWI76_RS03675 at 763.013 kb on + strand, within BWI76_RS03675 at 763.021 kb on - strand, within BWI76_RS03675 at 763.021 kb on - strand, within BWI76_RS03675 at 763.023 kb on - strand, within BWI76_RS03675 at 763.023 kb on - strand, within BWI76_RS03675 at 763.066 kb on + strand, within BWI76_RS03675 at 763.079 kb on - strand, within BWI76_RS03675 at 763.085 kb on - strand, within BWI76_RS03675 at 763.085 kb on - strand, within BWI76_RS03675 at 763.087 kb on + strand, within BWI76_RS03675 at 763.095 kb on + strand, within BWI76_RS03675 at 763.096 kb on - strand, within BWI76_RS03675 at 763.104 kb on - strand, within BWI76_RS03675 at 763.192 kb on - strand at 763.192 kb on - strand at 763.192 kb on - strand at 763.195 kb on + strand at 763.203 kb on - strand at 763.203 kb on - strand at 763.203 kb on - strand at 763.220 kb on + strand at 763.242 kb on + strand at 763.242 kb on + strand at 763.242 kb on + strand at 763.242 kb on + strand at 763.242 kb on + strand at 763.242 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.244 kb on + strand at 763.249 kb on + strand at 763.249 kb on + strand at 763.250 kb on - strand at 763.250 kb on - strand at 763.250 kb on - strand at 763.252 kb on - strand at 763.252 kb on - strand at 763.257 kb on + strand at 763.257 kb on - strand at 763.263 kb on + strand at 763.272 kb on - strand at 763.277 kb on + strand at 763.277 kb on + strand at 763.282 kb on + strand at 763.285 kb on - strand at 763.285 kb on - strand at 763.285 kb on - strand at 763.285 kb on - strand at 763.285 kb on - strand at 763.298 kb on + strand at 763.298 kb on + strand at 763.298 kb on + strand at 763.298 kb on + strand at 763.298 kb on + strand at 763.306 kb on - strand at 763.313 kb on + strand at 763.313 kb on + strand at 763.321 kb on - strand at 763.327 kb on - strand at 763.363 kb on - strand at 763.412 kb on - strand, within BWI76_RS03680 at 763.418 kb on + strand, within BWI76_RS03680 at 763.418 kb on + strand, within BWI76_RS03680 at 763.426 kb on - strand, within BWI76_RS03680 at 763.704 kb on - strand, within BWI76_RS03680 at 763.816 kb on - strand, within BWI76_RS03680 at 763.943 kb on + strand, within BWI76_RS03680 at 763.953 kb on + strand, within BWI76_RS03680 at 763.953 kb on + strand, within BWI76_RS03680 at 764.001 kb on + strand, within BWI76_RS03680 at 764.001 kb on + strand, within BWI76_RS03680 at 764.033 kb on - strand, within BWI76_RS03680 at 764.109 kb on + strand, within BWI76_RS03680 at 764.269 kb on - strand, within BWI76_RS03680 at 764.421 kb on + strand, within BWI76_RS03680 at 764.513 kb on - strand, within BWI76_RS03680 at 764.518 kb on - strand, within BWI76_RS03680 at 764.520 kb on + strand, within BWI76_RS03680 at 764.542 kb on + strand, within BWI76_RS03680 at 764.734 kb on + strand at 764.742 kb on - strand at 764.804 kb on - strand at 764.804 kb on - strand at 764.936 kb on + strand at 764.975 kb on + strand at 764.983 kb on - strand at 765.108 kb on + strand, within BWI76_RS03685 at 765.139 kb on + strand, within BWI76_RS03685 at 765.147 kb on - strand, within BWI76_RS03685 at 765.202 kb on - strand, within BWI76_RS03685 at 765.202 kb on - strand, within BWI76_RS03685 at 765.242 kb on + strand, within BWI76_RS03685 at 765.260 kb on - strand, within BWI76_RS03685 at 765.294 kb on + strand, within BWI76_RS03685 at 765.316 kb on - strand, within BWI76_RS03685 at 765.533 kb on + strand, within BWI76_RS03685 at 765.627 kb on + strand, within BWI76_RS03685 at 765.635 kb on - strand, within BWI76_RS03685 at 765.684 kb on + strand, within BWI76_RS03685 at 765.703 kb on + strand, within BWI76_RS03685 at 765.738 kb on - strand, within BWI76_RS03685 at 765.829 kb on - strand, within BWI76_RS03685 at 765.842 kb on + strand, within BWI76_RS03685 at 765.842 kb on + strand, within BWI76_RS03685
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH9 remove 762,447 - BWI76_RS03675 0.39 -1.4 762,451 + BWI76_RS03675 0.40 +0.8 762,464 + BWI76_RS03675 0.41 +1.3 762,485 + BWI76_RS03675 0.42 +0.5 762,485 + BWI76_RS03675 0.42 -1.0 762,493 - BWI76_RS03675 0.43 +1.1 762,493 - BWI76_RS03675 0.43 -0.1 762,493 - +1.3 762,493 - BWI76_RS03675 0.43 -1.0 762,570 + BWI76_RS03675 0.49 +0.4 762,595 + BWI76_RS03675 0.51 +3.1 762,603 - BWI76_RS03675 0.51 -1.0 762,603 - BWI76_RS03675 0.51 +0.4 762,605 + BWI76_RS03675 0.51 -1.0 762,613 - BWI76_RS03675 0.52 -0.2 762,615 - BWI76_RS03675 0.52 -1.7 762,626 - BWI76_RS03675 0.53 +1.9 762,716 - BWI76_RS03675 0.60 -0.2 762,728 - BWI76_RS03675 0.61 +0.5 762,739 - BWI76_RS03675 0.61 -1.3 762,739 - BWI76_RS03675 0.61 +0.5 762,739 - BWI76_RS03675 0.61 -1.1 762,769 - BWI76_RS03675 0.64 -0.7 762,769 - BWI76_RS03675 0.64 -0.6 762,776 + BWI76_RS03675 0.64 +0.7 762,784 - BWI76_RS03675 0.65 +0.7 762,784 - BWI76_RS03675 0.65 +0.2 762,784 - BWI76_RS03675 0.65 +0.1 762,790 - BWI76_RS03675 0.65 -0.5 762,808 - BWI76_RS03675 0.67 -1.3 762,834 - BWI76_RS03675 0.69 +0.5 762,839 - BWI76_RS03675 0.69 -1.4 762,839 - BWI76_RS03675 0.69 -0.3 762,880 + BWI76_RS03675 0.72 +0.3 762,888 - BWI76_RS03675 0.73 -0.4 762,907 - BWI76_RS03675 0.74 -0.1 762,923 - BWI76_RS03675 0.75 -0.4 762,932 - BWI76_RS03675 0.76 -0.1 762,933 - BWI76_RS03675 0.76 -1.2 762,939 - BWI76_RS03675 0.77 +4.9 762,988 - BWI76_RS03675 0.80 +0.8 763,000 - BWI76_RS03675 0.81 +0.0 763,013 + BWI76_RS03675 0.82 -0.9 763,021 - BWI76_RS03675 0.83 -2.2 763,021 - BWI76_RS03675 0.83 +0.5 763,023 - BWI76_RS03675 0.83 +0.5 763,023 - BWI76_RS03675 0.83 +1.8 763,066 + BWI76_RS03675 0.86 +0.7 763,079 - BWI76_RS03675 0.87 -0.3 763,085 - BWI76_RS03675 0.88 +1.4 763,085 - BWI76_RS03675 0.88 +0.4 763,087 + BWI76_RS03675 0.88 -0.1 763,095 + BWI76_RS03675 0.88 -0.7 763,096 - BWI76_RS03675 0.88 +0.1 763,104 - BWI76_RS03675 0.89 +0.8 763,192 - +0.1 763,192 - +0.1 763,192 - -0.8 763,195 + -0.4 763,203 - -2.3 763,203 - +0.1 763,203 - +0.3 763,220 + -0.3 763,242 + +0.3 763,242 + -0.3 763,242 + +0.1 763,242 + -0.8 763,242 + +0.0 763,242 + +0.2 763,244 + -0.6 763,244 + +0.2 763,244 + +0.9 763,244 + -0.3 763,244 + -1.1 763,244 + +0.0 763,244 + +0.2 763,244 + +0.4 763,244 + +0.8 763,249 + +0.9 763,249 + +1.8 763,250 - -0.2 763,250 - -0.3 763,250 - -0.6 763,252 - -0.3 763,252 - -0.6 763,257 + +1.2 763,257 - +1.0 763,263 + -0.5 763,272 - -0.8 763,277 + +0.7 763,277 + +1.0 763,282 + +0.1 763,285 - -0.9 763,285 - +0.5 763,285 - +1.4 763,285 - +0.3 763,285 - -0.2 763,298 + -0.1 763,298 + -0.3 763,298 + -0.4 763,298 + -0.9 763,298 + -0.2 763,306 - -0.1 763,313 + -0.3 763,313 + -0.7 763,321 - +0.5 763,327 - -0.4 763,363 - -1.6 763,412 - BWI76_RS03680 0.11 +0.2 763,418 + BWI76_RS03680 0.11 +0.0 763,418 + BWI76_RS03680 0.11 -0.2 763,426 - BWI76_RS03680 0.12 -0.7 763,704 - BWI76_RS03680 0.29 +1.2 763,816 - BWI76_RS03680 0.36 -1.1 763,943 + BWI76_RS03680 0.44 +1.0 763,953 + BWI76_RS03680 0.44 +0.5 763,953 + BWI76_RS03680 0.44 +1.4 764,001 + BWI76_RS03680 0.47 +0.4 764,001 + BWI76_RS03680 0.47 -0.1 764,033 - BWI76_RS03680 0.49 -0.0 764,109 + BWI76_RS03680 0.54 -0.0 764,269 - BWI76_RS03680 0.64 +1.5 764,421 + BWI76_RS03680 0.73 +1.4 764,513 - BWI76_RS03680 0.79 +0.1 764,518 - BWI76_RS03680 0.79 -0.1 764,520 + BWI76_RS03680 0.79 +0.0 764,542 + BWI76_RS03680 0.81 +0.2 764,734 + -0.3 764,742 - -1.0 764,804 - -0.2 764,804 - +0.6 764,936 + -0.3 764,975 + -0.7 764,983 - -0.4 765,108 + BWI76_RS03685 0.16 +0.6 765,139 + BWI76_RS03685 0.19 -0.3 765,147 - BWI76_RS03685 0.19 +1.4 765,202 - BWI76_RS03685 0.24 +0.7 765,202 - BWI76_RS03685 0.24 -1.1 765,242 + BWI76_RS03685 0.28 +0.9 765,260 - BWI76_RS03685 0.29 -0.2 765,294 + BWI76_RS03685 0.32 +0.1 765,316 - BWI76_RS03685 0.34 -0.5 765,533 + BWI76_RS03685 0.53 -0.2 765,627 + BWI76_RS03685 0.61 +0.2 765,635 - BWI76_RS03685 0.61 -0.7 765,684 + BWI76_RS03685 0.65 +0.5 765,703 + BWI76_RS03685 0.67 -0.0 765,738 - BWI76_RS03685 0.70 +1.0 765,829 - BWI76_RS03685 0.78 -0.0 765,842 + BWI76_RS03685 0.79 -1.0 765,842 + BWI76_RS03685 0.79 +0.8
Or see this region's nucleotide sequence