Experiment: MoLS4 with L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0945 and DVU0946 are separated by 2 nucleotides DVU0946 and DVU0947 are separated by 55 nucleotides
DVU0945: DVU0945 - sensor histidine kinase (TIGR), at 1,037,557 to 1,039,989
DVU0945
DVU0946: DVU0946 - sigma-54 dependent transcriptional regulator/response regulator (TIGR), at 1,039,992 to 1,041,422
DVU0946
DVU0947: DVU0947 - membrane protein, putative (TIGR), at 1,041,478 to 1,042,383
DVU0947
Position (kb)
1039
1040
1041
1042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1039.112 kb on - strand, within DVU0945 at 1039.157 kb on - strand, within DVU0945 at 1039.187 kb on - strand, within DVU0945 at 1039.189 kb on + strand, within DVU0945 at 1039.202 kb on - strand, within DVU0945 at 1039.361 kb on + strand, within DVU0945 at 1039.366 kb on + strand, within DVU0945 at 1039.376 kb on + strand, within DVU0945 at 1039.507 kb on - strand, within DVU0945 at 1039.707 kb on + strand, within DVU0945 at 1039.712 kb on + strand, within DVU0945 at 1039.740 kb on - strand, within DVU0945 at 1039.766 kb on - strand at 1039.781 kb on + strand at 1039.820 kb on - strand at 1039.827 kb on + strand at 1039.845 kb on - strand at 1039.863 kb on - strand at 1039.912 kb on - strand at 1040.049 kb on - strand at 1040.129 kb on - strand at 1040.185 kb on + strand, within DVU0946 at 1040.360 kb on - strand, within DVU0946 at 1040.656 kb on - strand, within DVU0946 at 1040.656 kb on - strand, within DVU0946 at 1040.660 kb on + strand, within DVU0946 at 1040.785 kb on + strand, within DVU0946 at 1041.023 kb on + strand, within DVU0946 at 1041.151 kb on + strand, within DVU0946 at 1041.324 kb on - strand at 1041.473 kb on + strand at 1041.625 kb on - strand, within DVU0947 at 1041.665 kb on + strand, within DVU0947 at 1041.704 kb on + strand, within DVU0947 at 1041.714 kb on - strand, within DVU0947 at 1041.714 kb on - strand, within DVU0947 at 1041.716 kb on + strand, within DVU0947 at 1041.734 kb on - strand, within DVU0947 at 1041.772 kb on - strand, within DVU0947 at 1041.863 kb on + strand, within DVU0947 at 1041.869 kb on - strand, within DVU0947 at 1041.972 kb on - strand, within DVU0947 at 1042.006 kb on + strand, within DVU0947 at 1042.011 kb on + strand, within DVU0947 at 1042.272 kb on - strand, within DVU0947 at 1042.286 kb on + strand, within DVU0947 at 1042.296 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Alanine (N) remove 1,039,112 - DVU0945 0.64 -0.2 1,039,157 - DVU0945 0.66 -0.3 1,039,187 - DVU0945 0.67 -0.0 1,039,189 + DVU0945 0.67 -1.4 1,039,202 - DVU0945 0.68 +0.3 1,039,361 + DVU0945 0.74 +0.1 1,039,366 + DVU0945 0.74 +0.5 1,039,376 + DVU0945 0.75 -0.5 1,039,507 - DVU0945 0.80 -0.9 1,039,707 + DVU0945 0.88 +0.7 1,039,712 + DVU0945 0.89 +1.5 1,039,740 - DVU0945 0.90 -1.3 1,039,766 - +0.2 1,039,781 + +1.4 1,039,820 - -0.2 1,039,827 + -0.3 1,039,845 - -0.6 1,039,863 - +2.4 1,039,912 - -0.1 1,040,049 - -0.2 1,040,129 - -0.3 1,040,185 + DVU0946 0.13 +0.2 1,040,360 - DVU0946 0.26 -1.0 1,040,656 - DVU0946 0.46 -1.5 1,040,656 - DVU0946 0.46 +0.2 1,040,660 + DVU0946 0.47 -0.5 1,040,785 + DVU0946 0.55 -0.3 1,041,023 + DVU0946 0.72 -0.9 1,041,151 + DVU0946 0.81 +1.6 1,041,324 - -1.1 1,041,473 + -0.2 1,041,625 - DVU0947 0.16 +0.6 1,041,665 + DVU0947 0.21 +0.1 1,041,704 + DVU0947 0.25 -0.3 1,041,714 - DVU0947 0.26 +0.4 1,041,714 - DVU0947 0.26 +0.1 1,041,716 + DVU0947 0.26 -2.0 1,041,734 - DVU0947 0.28 +1.2 1,041,772 - DVU0947 0.32 +0.4 1,041,863 + DVU0947 0.42 +0.2 1,041,869 - DVU0947 0.43 +0.0 1,041,972 - DVU0947 0.55 +0.0 1,042,006 + DVU0947 0.58 -1.5 1,042,011 + DVU0947 0.59 +0.0 1,042,272 - DVU0947 0.88 +0.2 1,042,286 + DVU0947 0.89 +1.3 1,042,296 - -0.9
Or see this region's nucleotide sequence