Experiment: MoLS4 with L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0654 and DVU0655 are separated by 39 nucleotides DVU0655 and DVU0656 are separated by 138 nucleotides DVU0656 and DVU0657 are separated by 66 nucleotides DVU0657 and DVU0658 are separated by 10 nucleotides
DVU0654: DVU0654 - peptidase, U32 family (TIGR), at 726,616 to 727,842
DVU0654
DVU0655: DVU0655 - PHP domain protein (TIGR), at 727,882 to 728,748
DVU0655
DVU0656: DVU0656 - conserved hypothetical protein (TIGR), at 728,887 to 729,096
DVU0656
DVU0657: DVU0657 - heat shock protein, Hsp20 family (TIGR), at 729,163 to 729,576
DVU0657
DVU0658: DVU0658 - heat shock protein, Hsp20 family (TIGR), at 729,587 to 730,048
DVU0658
Position (kb) 727
728
729 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 726.930 kb on - strand, within DVU0654 at 727.038 kb on + strand, within DVU0654 at 727.132 kb on - strand, within DVU0654 at 727.153 kb on + strand, within DVU0654 at 727.179 kb on + strand, within DVU0654 at 727.273 kb on - strand, within DVU0654 at 727.293 kb on + strand, within DVU0654 at 727.399 kb on + strand, within DVU0654 at 727.440 kb on - strand, within DVU0654 at 727.486 kb on - strand, within DVU0654 at 727.491 kb on - strand, within DVU0654 at 727.536 kb on - strand, within DVU0654 at 727.553 kb on + strand, within DVU0654 at 727.648 kb on + strand, within DVU0654 at 727.656 kb on - strand, within DVU0654 at 727.701 kb on - strand, within DVU0654 at 727.857 kb on + strand at 727.860 kb on - strand at 727.865 kb on - strand at 727.870 kb on - strand at 727.921 kb on - strand at 728.019 kb on + strand, within DVU0655 at 728.064 kb on - strand, within DVU0655 at 728.114 kb on + strand, within DVU0655 at 728.114 kb on + strand, within DVU0655 at 728.114 kb on + strand, within DVU0655 at 728.166 kb on - strand, within DVU0655 at 728.166 kb on - strand, within DVU0655 at 728.173 kb on - strand, within DVU0655 at 728.187 kb on + strand, within DVU0655 at 728.334 kb on - strand, within DVU0655 at 728.379 kb on + strand, within DVU0655 at 728.387 kb on - strand, within DVU0655 at 728.390 kb on - strand, within DVU0655 at 728.510 kb on - strand, within DVU0655 at 728.773 kb on + strand at 728.845 kb on + strand at 729.125 kb on + strand at 729.174 kb on + strand at 729.182 kb on - strand at 729.301 kb on + strand, within DVU0657 at 729.309 kb on - strand, within DVU0657 at 729.605 kb on - strand at 729.616 kb on + strand at 729.616 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Alanine (N) remove 726,930 - DVU0654 0.26 +2.4 727,038 + DVU0654 0.34 -0.1 727,132 - DVU0654 0.42 -0.5 727,153 + DVU0654 0.44 -2.2 727,179 + DVU0654 0.46 +0.3 727,273 - DVU0654 0.54 -0.3 727,293 + DVU0654 0.55 +0.4 727,399 + DVU0654 0.64 -1.6 727,440 - DVU0654 0.67 +2.4 727,486 - DVU0654 0.71 +0.5 727,491 - DVU0654 0.71 +1.6 727,536 - DVU0654 0.75 -0.8 727,553 + DVU0654 0.76 +1.6 727,648 + DVU0654 0.84 +0.3 727,656 - DVU0654 0.85 +0.3 727,701 - DVU0654 0.88 +0.5 727,857 + -0.3 727,860 - +0.8 727,865 - +0.1 727,870 - +0.1 727,921 - -1.9 728,019 + DVU0655 0.16 -2.0 728,064 - DVU0655 0.21 +0.3 728,114 + DVU0655 0.27 -1.2 728,114 + DVU0655 0.27 -0.4 728,114 + DVU0655 0.27 +0.8 728,166 - DVU0655 0.33 +3.2 728,166 - DVU0655 0.33 +0.3 728,173 - DVU0655 0.34 -0.5 728,187 + DVU0655 0.35 -0.1 728,334 - DVU0655 0.52 -0.3 728,379 + DVU0655 0.57 -0.1 728,387 - DVU0655 0.58 +0.0 728,390 - DVU0655 0.59 +0.4 728,510 - DVU0655 0.72 +0.4 728,773 + -0.4 728,845 + +0.1 729,125 + -0.0 729,174 + +0.5 729,182 - -0.0 729,301 + DVU0657 0.33 +0.7 729,309 - DVU0657 0.35 -0.1 729,605 - +4.0 729,616 + +0.3 729,616 + +0.8
Or see this region's nucleotide sequence