Strain Fitness in Pantoea sp. MT58 around IAI47_18340

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
3,902,611	-				-0.9
3,902,664	-				-0.3
3,902,707	+				-1.4
3,902,708	-				-1.7
3,902,708	-				+0.6
3,902,716	+				+0.7
3,902,716	+				+0.2
3,902,716	+				-1.5
3,902,716	+				-0.4
3,902,717	-				+0.3
3,902,717	-				-0.3
3,902,717	-				-0.2
3,902,717	-				+1.0
3,902,786	+		IAI47_18335	0.10	-0.4
3,902,786	+		IAI47_18335	0.10	+0.4
3,902,786	+		IAI47_18335	0.10	-0.1
3,902,786	+		IAI47_18335	0.10	-1.1
3,902,787	-		IAI47_18335	0.10	+0.3
3,902,787	-		IAI47_18335	0.10	+0.3
3,902,820	-		IAI47_18335	0.14	+1.0
3,902,820	-		IAI47_18335	0.14	-1.0
3,902,828	+		IAI47_18335	0.15	-0.5
3,902,837	+		IAI47_18335	0.16	+1.6
3,902,837	+		IAI47_18335	0.16	-1.2
3,902,837	+		IAI47_18335	0.16	-0.3
3,902,837	+		IAI47_18335	0.16	-0.7
3,902,895	-		IAI47_18335	0.24	+0.4
3,902,895	-		IAI47_18335	0.24	-1.1
3,902,895	-		IAI47_18335	0.24	-0.0
3,902,990	+		IAI47_18335	0.35	-1.8
3,903,080	+		IAI47_18335	0.47	+0.7
3,903,080	+		IAI47_18335	0.47	+0.3
3,903,080	+		IAI47_18335	0.47	+1.1
3,903,080	+		IAI47_18335	0.47	+0.3
3,903,081	-		IAI47_18335	0.47	+0.6
3,903,081	-		IAI47_18335	0.47	+0.0
3,903,081	-		IAI47_18335	0.47	+0.5
3,903,086	+		IAI47_18335	0.47	+1.0
3,903,087	-		IAI47_18335	0.48	-1.3
3,903,106	+		IAI47_18335	0.50	+0.6
3,903,106	+		IAI47_18335	0.50	+0.3
3,903,106	+		IAI47_18335	0.50	+0.2
3,903,107	-		IAI47_18335	0.50	+0.5
3,903,107	-		IAI47_18335	0.50	+0.9
3,903,107	-		IAI47_18335	0.50	+0.0
3,903,115	+		IAI47_18335	0.51	+3.1
3,903,115	+		IAI47_18335	0.51	-2.0
3,903,115	+		IAI47_18335	0.51	-0.3
3,903,115	+		IAI47_18335	0.51	+0.6
3,903,115	+		IAI47_18335	0.51	+0.6
3,903,116	-		IAI47_18335	0.51	-2.1
3,903,116	-		IAI47_18335	0.51	-0.7
3,903,116	-		IAI47_18335	0.51	-0.3
3,903,116	-		IAI47_18335	0.51	-1.5
3,903,139	+		IAI47_18335	0.54	+1.3
3,903,139	+		IAI47_18335	0.54	+1.2
3,903,139	+		IAI47_18335	0.54	+0.5
3,903,139	+		IAI47_18335	0.54	-0.1
3,903,140	-		IAI47_18335	0.54	-3.1
3,903,140	-		IAI47_18335	0.54	-1.6
3,903,140	-		IAI47_18335	0.54	+0.9
3,903,140	-		IAI47_18335	0.54	-0.4
3,903,207	-		IAI47_18335	0.63	+0.4
3,903,207	-		IAI47_18335	0.63	+0.7
3,903,220	+		IAI47_18335	0.64	-0.7
3,903,220	+		IAI47_18335	0.64	-0.9
3,903,220	+		IAI47_18335	0.64	+0.9
3,903,263	+		IAI47_18335	0.70	-0.9
3,903,264	-		IAI47_18335	0.70	-0.0
3,903,264	-		IAI47_18335	0.70	-1.8
3,903,323	+		IAI47_18335	0.77	-0.9
3,903,323	+		IAI47_18335	0.77	+0.7
3,903,323	+		IAI47_18335	0.77	+0.7
3,903,323	+		IAI47_18335	0.77	-1.8
3,903,323	+		IAI47_18335	0.77	-0.7
3,903,323	+		IAI47_18335	0.77	+0.9
3,903,323	+		IAI47_18335	0.77	+1.4
3,903,323	+		IAI47_18335	0.77	+2.3
3,903,323	+		IAI47_18335	0.77	+1.0
3,903,323	+		IAI47_18335	0.77	+0.7
3,903,324	-		IAI47_18335	0.77	+0.3
3,903,324	-		IAI47_18335	0.77	+0.4
3,903,324	-		IAI47_18335	0.77	+0.8
3,903,324	-		IAI47_18335	0.77	-0.0
3,903,324	-		IAI47_18335	0.77	-0.4
3,903,324	-		IAI47_18335	0.77	-0.6
3,903,324	-		IAI47_18335	0.77	+0.7
3,903,324	-		IAI47_18335	0.77	+0.3
3,903,324	-		IAI47_18335	0.77	-0.0
3,903,324	-		IAI47_18335	0.77	+0.4
3,903,324	-		IAI47_18335	0.77	+0.3
3,903,324	-		IAI47_18335	0.77	-0.1
3,903,325	+		IAI47_18335	0.77	+0.0
3,903,325	+		IAI47_18335	0.77	+2.7
3,903,325	+		IAI47_18335	0.77	+2.7
3,903,325	+		IAI47_18335	0.77	+0.7
3,903,325	+		IAI47_18335	0.77	+0.5
3,903,325	+		IAI47_18335	0.77	+0.2
3,903,325	+		IAI47_18335	0.77	-0.2
3,903,325	+		IAI47_18335	0.77	-1.8
3,903,325	+		IAI47_18335	0.77	+1.0
3,903,326	-		IAI47_18335	0.77	-1.8
3,903,326	-		IAI47_18335	0.77	+0.0
3,903,326	-		IAI47_18335	0.77	+0.3
3,903,326	-		IAI47_18335	0.77	-1.0
3,903,368	+		IAI47_18335	0.83	-0.8
3,903,368	+		IAI47_18335	0.83	-0.6
3,903,368	+		IAI47_18335	0.83	-1.4
3,903,368	+		IAI47_18335	0.83	+0.6
3,903,368	+		IAI47_18335	0.83	-0.0
3,903,368	+		IAI47_18335	0.83	-0.4
3,903,368	+		IAI47_18335	0.83	-0.8
3,903,368	+		IAI47_18335	0.83	-0.3
3,903,368	+		IAI47_18335	0.83	+0.2
3,903,368	+		IAI47_18335	0.83	+0.6
3,903,368	+		IAI47_18335	0.83	+0.8
3,903,368	+		IAI47_18335	0.83	-0.6
3,903,369	-		IAI47_18335	0.83	+0.8
3,903,369	-		IAI47_18335	0.83	-0.9
3,903,369	-		IAI47_18335	0.83	+0.7
3,903,369	-		IAI47_18335	0.83	+0.3
3,903,401	+		IAI47_18335	0.87	+0.4
3,903,402	-		IAI47_18335	0.87	-0.2
3,903,402	-		IAI47_18335	0.87	+0.5
3,903,402	-		IAI47_18335	0.87	+0.9
3,903,404	-		IAI47_18335	0.87	-1.0
3,903,502	+				-0.5
3,903,502	+				-0.3
3,903,502	+				+3.5
3,903,502	+				-0.5
3,903,502	+				-0.9
3,903,502	+				+0.3
3,903,502	+				+1.1
3,903,502	+				-0.2
3,903,502	+				-0.2
3,903,503	-				-0.6
3,903,503	-				+0.2
3,903,503	-				-0.4
3,903,503	-				-0.9
3,903,503	-				-1.9
3,903,519	+				+1.2
3,903,519	+				+0.7
3,903,665	+		IAI47_18340	0.11	+1.4
3,903,665	+		IAI47_18340	0.11	+0.9
3,903,665	+		IAI47_18340	0.11	+0.4
3,903,665	+		IAI47_18340	0.11	+1.9
3,903,666	-		IAI47_18340	0.11	+0.3
3,903,756	+		IAI47_18340	0.20	-0.8
3,903,756	+		IAI47_18340	0.20	-0.3
3,903,757	-		IAI47_18340	0.20	-1.5
3,903,757	-		IAI47_18340	0.20	+1.2
3,903,782	+		IAI47_18340	0.23	+1.2
3,903,783	-		IAI47_18340	0.23	-1.0
3,903,783	-		IAI47_18340	0.23	+0.1
3,903,798	-		IAI47_18340	0.24	-1.4
3,903,800	+		IAI47_18340	0.24	-0.1
3,903,800	+		IAI47_18340	0.24	-0.5
3,903,801	-		IAI47_18340	0.24	+1.9
3,903,801	-		IAI47_18340	0.24	+1.6
3,903,801	-		IAI47_18340	0.24	+0.2
3,903,801	-		IAI47_18340	0.24	+0.8
3,903,838	+		IAI47_18340	0.28	+0.6
3,903,838	+		IAI47_18340	0.28	-0.3
3,903,838	+		IAI47_18340	0.28	+0.4
3,903,838	+		IAI47_18340	0.28	+0.4
3,903,838	+		IAI47_18340	0.28	+1.7
3,903,838	+		IAI47_18340	0.28	+0.7
3,903,838	+		IAI47_18340	0.28	-0.0
3,903,838	+		IAI47_18340	0.28	-1.2
3,903,839	-		IAI47_18340	0.28	+0.9
3,903,839	-		IAI47_18340	0.28	-0.3
3,903,839	-		IAI47_18340	0.28	-0.6
3,903,839	-		IAI47_18340	0.28	-0.0
3,903,927	-		IAI47_18340	0.37	+0.8
3,903,970	+		IAI47_18340	0.41	+0.0
3,903,971	-		IAI47_18340	0.42	-0.7
3,904,117	-		IAI47_18340	0.56	+2.6
3,904,117	-		IAI47_18340	0.56	+0.2
3,904,162	+		IAI47_18340	0.61	-1.6
3,904,162	+		IAI47_18340	0.61	-0.0
3,904,163	-		IAI47_18340	0.61	+0.8
3,904,163	-		IAI47_18340	0.61	-0.4
3,904,163	-		IAI47_18340	0.61	-0.1
3,904,163	-		IAI47_18340	0.61	+1.1
3,904,178	+		IAI47_18340	0.62	-0.1
3,904,184	+		IAI47_18340	0.63	-1.4
3,904,189	+		IAI47_18340	0.64	-0.0
3,904,189	+		IAI47_18340	0.64	-0.8
3,904,189	+		IAI47_18340	0.64	+2.4
3,904,190	-		IAI47_18340	0.64	+0.8
3,904,190	-		IAI47_18340	0.64	-1.0
3,904,190	-		IAI47_18340	0.64	+0.2
3,904,213	+		IAI47_18340	0.66	-0.7
3,904,214	-		IAI47_18340	0.66	+0.3
3,904,214	-		IAI47_18340	0.66	-0.3
3,904,214	-		IAI47_18340	0.66	+0.3
3,904,220	+		IAI47_18340	0.67	+0.9
3,904,220	+		IAI47_18340	0.67	-0.9
3,904,327	+		IAI47_18340	0.77	-0.3
3,904,328	-		IAI47_18340	0.78	+0.4
3,904,328	-		IAI47_18340	0.78	-1.2
3,904,342	+		IAI47_18340	0.79	+0.2
3,904,347	+		IAI47_18340	0.79	+1.1
3,904,347	+		IAI47_18340	0.79	+0.7
3,904,347	+		IAI47_18340	0.79	+0.3
3,904,347	+		IAI47_18340	0.79	+0.0
3,904,347	+		IAI47_18340	0.79	-0.6
3,904,347	+		IAI47_18340	0.79	-0.1
3,904,347	+		IAI47_18340	0.79	-1.0
3,904,347	+		IAI47_18340	0.79	-0.3
3,904,347	+		IAI47_18340	0.79	-0.2
3,904,347	+		IAI47_18340	0.79	-0.4
3,904,347	+		IAI47_18340	0.79	+0.4
3,904,347	+		IAI47_18340	0.79	+0.9
3,904,348	-		IAI47_18340	0.80	-0.1
3,904,348	-		IAI47_18340	0.80	-0.7
3,904,348	-		IAI47_18340	0.80	+0.9
3,904,348	-		IAI47_18340	0.80	+1.6
3,904,348	-		IAI47_18340	0.80	-0.7
3,904,348	-		IAI47_18340	0.80	-0.3
3,904,351	+		IAI47_18340	0.80	-0.4
3,904,352	-		IAI47_18340	0.80	-0.5
3,904,391	+		IAI47_18340	0.84	+0.5
3,904,391	+		IAI47_18340	0.84	+0.6
3,904,391	+		IAI47_18340	0.84	+1.0
3,904,391	+		IAI47_18340	0.84	-0.4
3,904,391	+		IAI47_18340	0.84	+0.2
3,904,392	-		IAI47_18340	0.84	-0.2
3,904,417	+		IAI47_18340	0.87	+0.2
3,904,417	+		IAI47_18340	0.87	-0.1
3,904,418	-		IAI47_18340	0.87	+0.9
3,904,437	+		IAI47_18340	0.89	-0.5
3,904,572	-				-0.0
3,904,613	+				+2.6
3,904,613	+				-0.2
3,904,624	+				+0.0
3,904,624	+				+0.6
3,904,624	+				-0.2
3,904,624	+				-0.8
3,904,625	-				-0.8
3,904,625	-				-1.4
3,904,646	+				+0.7
3,904,646	+				+2.4
3,904,647	-				-0.0
3,904,647	-				-1.0
3,904,647	-				-1.4
3,904,647	-				-0.2
3,904,687	+				-0.5
3,904,687	+				-0.2
3,904,687	+				-0.9
3,904,687	+				-0.1
3,904,687	+				-1.9
3,904,687	+				+0.7
3,904,687	+				-0.0
3,904,688	-				-2.0
3,904,688	-				-0.8
3,904,688	-				-0.4
3,904,688	-				+0.1
3,904,688	-				-0.3
3,904,695	+				-0.3
3,904,695	+				+0.4
3,904,696	-				-0.4
3,904,696	-				-0.8
3,904,696	-				-0.2
3,904,696	-				-0.6
3,904,750	-		IAI47_18345	0.14	-0.1
3,904,769	-		IAI47_18345	0.17	+0.8
3,904,781	+		IAI47_18345	0.19	+0.4
3,904,781	+		IAI47_18345	0.19	-0.3
3,904,907	-		IAI47_18345	0.39	-0.7
3,904,907	-		IAI47_18345	0.39	-2.0
3,904,907	-		IAI47_18345	0.39	+0.3
3,904,907	-		IAI47_18345	0.39	-1.0
3,905,009	+		IAI47_18345	0.55	-0.1
3,905,009	+		IAI47_18345	0.55	-1.7
3,905,070	+		IAI47_18345	0.65	-0.0
3,905,071	-		IAI47_18345	0.65	-0.9
3,905,071	-		IAI47_18345	0.65	-1.1
3,905,071	-		IAI47_18345	0.65	-0.3
3,905,094	+		IAI47_18345	0.69	+0.0
3,905,094	+		IAI47_18345	0.69	+0.0
3,905,095	-		IAI47_18345	0.69	-0.2
3,905,095	-		IAI47_18345	0.69	-1.0
3,905,101	+		IAI47_18345	0.70	+0.0
3,905,101	+		IAI47_18345	0.70	-1.0
3,905,101	+		IAI47_18345	0.70	+0.2
3,905,101	+		IAI47_18345	0.70	+1.0
3,905,101	+		IAI47_18345	0.70	+0.7
3,905,101	+		IAI47_18345	0.70	+0.6
3,905,101	+		IAI47_18345	0.70	-0.0
3,905,102	-		IAI47_18345	0.70	-0.3
3,905,102	-		IAI47_18345	0.70	-2.8
3,905,102	-		IAI47_18345	0.70	-2.0
3,905,102	-		IAI47_18345	0.70	-2.4
3,905,102	-		IAI47_18345	0.70	+0.1
3,905,102	-		IAI47_18345	0.70	-1.3
3,905,156	-		IAI47_18345	0.79	-0.3
3,905,190	+		IAI47_18345	0.84	+0.0
3,905,191	-		IAI47_18345	0.85	-1.1
3,905,213	+		IAI47_18345	0.88	+0.4
3,905,213	+		IAI47_18345	0.88	+0.0
3,905,214	-		IAI47_18345	0.88	-1.0
3,905,214	-		IAI47_18345	0.88	-0.4
3,905,242	-				+0.2
3,905,284	+				-0.9
3,905,292	+				-0.1
3,905,360	-				+1.6
3,905,360	-				+0.4
3,905,393	+				-0.1
3,905,393	+				+1.8
3,905,393	+				-0.2
3,905,394	-				-0.6
3,905,394	-				+0.3
3,905,394	-				+0.9
3,905,394	-				+0.2
3,905,394	-				-2.1
3,905,394	-				-1.9
3,905,394	-				+0.1
3,905,394	-				-0.3
3,905,394	-				-0.3
3,905,414	+				+0.2
3,905,414	+				-0.5
3,905,414	+				+0.1
3,905,414	+				+1.6
3,905,414	+				+0.3
3,905,414	+				-0.8
3,905,414	+				+0.8
3,905,414	+				-0.6
3,905,414	+				+1.2
3,905,415	-				-1.0
3,905,415	-				+1.4
3,905,415	-				-1.8
3,905,415	-				+0.6
3,905,415	-				-0.4
3,905,415	-				-1.4
3,905,415	-				-0.4
3,905,415	-				+0.8
3,905,415	-				-0.1
3,905,415	-				+1.2
3,905,415	-				-0.8
3,905,416	+				+0.3
3,905,416	+				-0.2
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