Strain Fitness in Pantoea sp. MT58 around IAI47_13520

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
2,867,463	-		IAI47_13510	0.77	-0.9
2,867,463	-		IAI47_13510	0.77	-0.4
2,867,491	+		IAI47_13510	0.81	+1.2
2,867,492	-		IAI47_13510	0.81	-1.0
2,867,532	+		IAI47_13510	0.87	+0.2
2,867,532	+		IAI47_13510	0.87	-0.4
2,867,533	-				+2.6
2,867,533	-		IAI47_13510	0.87	+0.3
2,867,606	+				-0.4
2,867,606	+				-1.7
2,867,607	-				-1.7
2,867,632	+				+1.2
2,867,632	+				+0.6
2,867,632	+				+0.1
2,867,633	-				-0.3
2,867,633	-				-1.0
2,867,633	-				-2.4
2,867,650	+				+0.5
2,867,650	+				-0.5
2,867,650	+				+1.5
2,867,651	-				-0.8
2,867,651	-				+0.6
2,867,684	+				+0.1
2,867,684	+				+0.5
2,867,684	+				-0.8
2,867,685	-				+0.2
2,867,685	-				+0.3
2,867,685	-				-1.2
2,867,689	+				+0.9
2,867,690	-				+0.1
2,867,690	-				+0.4
2,867,743	+		IAI47_13515	0.17	+0.1
2,867,743	+		IAI47_13515	0.17	-0.5
2,867,744	-		IAI47_13515	0.17	+0.4
2,867,744	-		IAI47_13515	0.17	+1.4
2,867,744	-		IAI47_13515	0.17	+0.2
2,867,744	-		IAI47_13515	0.17	+0.8
2,867,861	+		IAI47_13515	0.34	+0.3
2,867,861	+		IAI47_13515	0.34	-0.6
2,867,861	+		IAI47_13515	0.34	+0.1
2,867,902	-		IAI47_13515	0.40	+1.2
2,867,914	+		IAI47_13515	0.42	-0.8
2,867,914	+		IAI47_13515	0.42	+0.2
2,867,914	+		IAI47_13515	0.42	-0.4
2,867,914	+		IAI47_13515	0.42	-1.0
2,867,914	+		IAI47_13515	0.42	+0.6
2,867,915	-		IAI47_13515	0.42	-0.5
2,867,915	-		IAI47_13515	0.42	+0.6
2,867,915	-		IAI47_13515	0.42	-0.2
2,867,915	-		IAI47_13515	0.42	-0.7
2,867,915	-		IAI47_13515	0.42	+2.0
2,867,915	-		IAI47_13515	0.42	+2.6
2,867,941	+		IAI47_13515	0.46	+1.9
2,867,941	+		IAI47_13515	0.46	-0.9
2,868,074	+		IAI47_13515	0.66	+0.4
2,868,075	-		IAI47_13515	0.66	+1.3
2,868,075	-		IAI47_13515	0.66	-0.3
2,868,100	+		IAI47_13515	0.70	-1.6
2,868,100	+		IAI47_13515	0.70	-0.4
2,868,101	-		IAI47_13515	0.70	+0.8
2,868,101	-		IAI47_13515	0.70	+0.8
2,868,101	-		IAI47_13515	0.70	-1.0
2,868,194	+		IAI47_13515	0.84	-0.2
2,868,194	+		IAI47_13515	0.84	+0.9
2,868,194	+		IAI47_13515	0.84	-0.1
2,868,195	-		IAI47_13515	0.84	-0.4
2,868,195	-		IAI47_13515	0.84	+0.4
2,868,195	-		IAI47_13515	0.84	+0.2
2,868,196	+		IAI47_13515	0.84	-0.3
2,868,196	+		IAI47_13515	0.84	+0.5
2,868,197	-		IAI47_13515	0.84	+0.7
2,868,197	-		IAI47_13515	0.84	+0.1
2,868,260	+				+1.3
2,868,261	-				-0.9
2,868,284	+				+0.1
2,868,288	-				+0.2
2,868,288	-				-1.1
2,868,288	-				-0.7
2,868,288	-				+0.3
2,868,319	-				+1.7
2,868,319	-				+0.0
2,868,323	+				-1.1
2,868,324	-				+0.1
2,868,324	-				-0.0
2,868,331	-				+0.9
2,868,331	-				+0.8
2,868,374	+				+3.0
2,868,374	+				+0.7
2,868,375	-		IAI47_13520	0.10	+0.6
2,868,401	+		IAI47_13520	0.13	+0.7
2,868,401	+		IAI47_13520	0.13	+0.9
2,868,401	+		IAI47_13520	0.13	+0.3
2,868,401	+		IAI47_13520	0.13	+0.6
2,868,401	+		IAI47_13520	0.13	-0.2
2,868,402	-		IAI47_13520	0.14	-0.6
2,868,402	-		IAI47_13520	0.14	+0.0
2,868,402	-		IAI47_13520	0.14	-0.0
2,868,554	-		IAI47_13520	0.34	+0.2
2,868,554	-		IAI47_13520	0.34	+0.8
2,868,731	+		IAI47_13520	0.57	+0.4
2,868,731	+		IAI47_13520	0.57	-0.7
2,868,732	-		IAI47_13520	0.57	-0.7
2,868,732	-		IAI47_13520	0.57	+0.2
2,868,749	-		IAI47_13520	0.60	-0.4
2,868,749	-		IAI47_13520	0.60	+1.0
2,868,786	+		IAI47_13520	0.64	+0.9
2,868,786	+		IAI47_13520	0.64	-1.7
2,868,786	+		IAI47_13520	0.64	-0.4
2,868,786	+		IAI47_13520	0.64	-0.1
2,868,786	+		IAI47_13520	0.64	-1.2
2,868,786	+		IAI47_13520	0.64	-0.2
2,868,787	-		IAI47_13520	0.65	-0.0
2,868,787	-		IAI47_13520	0.65	+1.1
2,868,787	-		IAI47_13520	0.65	-0.2
2,868,787	-		IAI47_13520	0.65	-1.3
2,868,885	+		IAI47_13520	0.78	-0.5
2,868,886	-		IAI47_13520	0.78	-0.3
2,868,886	-		IAI47_13520	0.78	+1.3
2,868,993	+				-0.1
2,868,993	+				+0.7
2,868,993	+				-1.9
2,869,036	+				-0.3
2,869,037	-				-0.2
2,869,037	-				+1.2
2,869,037	-				+0.3
2,869,037	-				-0.2
2,869,079	+				+0.6
2,869,080	-				+1.3
2,869,080	-				+0.3
2,869,109	+				-0.8
2,869,109	+				+0.5
2,869,110	-				+1.0
2,869,110	-				+0.2
2,869,110	-				-0.8
2,869,211	+		IAI47_13525	0.15	-0.3
2,869,211	+		IAI47_13525	0.15	+0.3
2,869,212	-		IAI47_13525	0.15	-0.5
2,869,212	-		IAI47_13525	0.15	+0.5
2,869,344	-		IAI47_13525	0.27	+0.5
2,869,344	-		IAI47_13525	0.27	-0.7
2,869,515	-		IAI47_13525	0.41	+1.1
2,869,699	-		IAI47_13525	0.57	+0.4
2,869,699	-		IAI47_13525	0.57	+0.7
2,869,803	-		IAI47_13525	0.66	+1.0
2,869,814	+		IAI47_13525	0.67	+0.6
2,869,815	-		IAI47_13525	0.67	-0.4
2,869,815	-		IAI47_13525	0.67	+1.1
2,869,815	-		IAI47_13525	0.67	+0.1
2,869,837	+		IAI47_13525	0.69	+0.2
2,869,894	+		IAI47_13525	0.74	-0.3
2,869,894	+		IAI47_13525	0.74	-0.4
2,869,894	+		IAI47_13525	0.74	+0.3
2,869,946	-		IAI47_13525	0.79	-0.4
2,870,013	+		IAI47_13525	0.85	+0.3
2,870,044	+		IAI47_13525	0.87	-1.1
2,870,045	-		IAI47_13525	0.87	+0.1
2,870,045	-		IAI47_13525	0.87	-0.5