Strain Fitness in Pantoea sp. MT58 around IAI47_12620

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
2,651,820	+		IAI47_12610	0.36	+1.3
2,651,821	-		IAI47_12610	0.36	+0.3
2,651,870	+		IAI47_12610	0.44	+0.7
2,651,870	+		IAI47_12610	0.44	-0.2
2,651,870	+		IAI47_12610	0.44	+0.3
2,651,871	-		IAI47_12610	0.44	+0.2
2,651,871	-		IAI47_12610	0.44	-1.7
2,651,873	+		IAI47_12610	0.44	-0.1
2,651,873	+		IAI47_12610	0.44	+0.4
2,651,873	+		IAI47_12610	0.44	-0.6
2,651,873	+		IAI47_12610	0.44	-0.1
2,651,874	-		IAI47_12610	0.44	+0.9
2,651,910	+		IAI47_12610	0.50	-0.2
2,651,911	-		IAI47_12610	0.50	+1.0
2,651,930	+		IAI47_12610	0.53	-2.0
2,651,930	+		IAI47_12610	0.53	+0.0
2,651,930	+		IAI47_12610	0.53	+0.4
2,651,931	-		IAI47_12610	0.53	+0.4
2,651,931	-		IAI47_12610	0.53	+0.5
2,651,931	-		IAI47_12610	0.53	+0.8
2,651,967	-		IAI47_12610	0.59	-0.2
2,651,967	-		IAI47_12610	0.59	-0.1
2,651,967	-		IAI47_12610	0.59	-0.5
2,652,030	+		IAI47_12610	0.69	+0.7
2,652,030	+		IAI47_12610	0.69	-0.7
2,652,030	+		IAI47_12610	0.69	+1.2
2,652,031	-		IAI47_12610	0.69	-0.2
2,652,107	+		IAI47_12610	0.81	+1.3
2,652,198	-				-0.5
2,652,217	+				+0.9
2,652,217	+				+0.3
2,652,218	-				+0.5
2,652,222	-				+0.9
2,652,222	-				+0.6
2,652,231	+				+1.5
2,652,237	+				+0.2
2,652,251	+				+0.4
2,652,299	+				-0.2
2,652,300	-				+1.1
2,652,300	-				-1.4
2,652,300	-				+0.3
2,652,331	+				-0.6
2,652,332	-				+1.6
2,652,332	-				+1.8
2,652,332	-				-0.5
2,652,332	-				-0.5
2,652,339	-				-0.9
2,652,426	+		IAI47_12615	0.27	+0.0
2,652,426	+		IAI47_12615	0.27	+0.2
2,652,427	-		IAI47_12615	0.28	+0.1
2,652,455	+		IAI47_12615	0.34	+0.4
2,652,455	+		IAI47_12615	0.34	-0.4
2,652,456	-		IAI47_12615	0.34	-0.1
2,652,638	+		IAI47_12615	0.74	+0.8
2,652,674	+		IAI47_12615	0.81	+0.0
2,652,674	+		IAI47_12615	0.81	-1.2
2,652,674	+		IAI47_12615	0.81	+0.1
2,652,675	-		IAI47_12615	0.82	+1.1
2,652,675	-		IAI47_12615	0.82	+0.1
2,652,675	-		IAI47_12615	0.82	+1.3
2,652,675	-		IAI47_12615	0.82	+0.5
2,652,675	-		IAI47_12615	0.82	+0.3
2,652,677	+		IAI47_12615	0.82	-1.5
2,652,677	+		IAI47_12615	0.82	-1.4
2,652,677	+		IAI47_12615	0.82	+0.8
2,652,678	-		IAI47_12615	0.82	-1.6
2,652,678	-		IAI47_12615	0.82	-1.5
2,652,678	-		IAI47_12615	0.82	-1.0
2,652,713	+				-0.5
2,652,714	-				+0.7
2,652,714	-				+0.4
2,652,714	-				+0.4
2,652,735	+				-2.2
2,652,735	+				-1.5
2,652,735	+				-1.3
2,652,756	+				-0.1
2,652,756	+				-0.2
2,652,757	-				-0.2
2,652,768	+				+0.5
2,652,768	+				+0.1
2,652,769	-				+0.1
2,652,776	-				-0.8
2,652,776	-				+0.1
2,652,839	-				+0.9
2,652,839	-				+0.6
2,652,876	-				-0.1
2,652,876	-				+0.8
2,652,876	-				-0.2
2,652,876	-				+0.2
2,652,925	-				-1.0
2,652,926	-				-1.7
2,652,939	+				-1.7
2,652,940	-				+0.7
2,652,985	+		IAI47_12620	0.11	-1.1
2,652,986	-		IAI47_12620	0.11	-0.7
2,653,004	+		IAI47_12620	0.12	+0.3
2,653,004	+		IAI47_12620	0.12	+0.9
2,653,004	+		IAI47_12620	0.12	-0.3
2,653,005	-		IAI47_12620	0.12	-0.6
2,653,005	-		IAI47_12620	0.12	+0.3
2,653,041	+		IAI47_12620	0.14	+1.6
2,653,041	+		IAI47_12620	0.14	-2.0
2,653,042	-		IAI47_12620	0.14	+0.2
2,653,042	-		IAI47_12620	0.14	-0.4
2,653,042	-		IAI47_12620	0.14	+2.1
2,653,081	-		IAI47_12620	0.16	-0.2
2,653,087	+		IAI47_12620	0.16	+0.2
2,653,087	+		IAI47_12620	0.16	-0.6
2,653,087	+		IAI47_12620	0.16	+1.6
2,653,087	+		IAI47_12620	0.16	-0.4
2,653,088	-		IAI47_12620	0.16	-2.3
2,653,088	-		IAI47_12620	0.16	+1.1
2,653,103	+		IAI47_12620	0.17	+0.9
2,653,103	+		IAI47_12620	0.17	+0.5
2,653,104	-		IAI47_12620	0.17	+0.9
2,653,128	+		IAI47_12620	0.18	+0.2
2,653,128	+		IAI47_12620	0.18	-0.6
2,653,129	-		IAI47_12620	0.18	+0.0
2,653,129	-		IAI47_12620	0.18	-0.5
2,653,213	-		IAI47_12620	0.22	+0.7
2,653,213	-		IAI47_12620	0.22	+0.1
2,653,213	-		IAI47_12620	0.22	-0.1
2,653,213	-		IAI47_12620	0.22	-0.2
2,653,230	+		IAI47_12620	0.23	+2.2
2,653,278	+		IAI47_12620	0.25	-0.1
2,653,278	+		IAI47_12620	0.25	-0.7
2,653,279	-		IAI47_12620	0.25	+0.2
2,653,279	-		IAI47_12620	0.25	+0.7
2,653,311	-		IAI47_12620	0.27	-0.7
2,653,311	-		IAI47_12620	0.27	-1.6
2,653,349	+		IAI47_12620	0.29	+0.3
2,653,350	-		IAI47_12620	0.29	+0.5
2,653,398	-		IAI47_12620	0.31	-0.6
2,653,398	-		IAI47_12620	0.31	+0.1
2,653,398	-		IAI47_12620	0.31	+0.9
2,653,401	+		IAI47_12620	0.31	-1.5
2,653,401	+		IAI47_12620	0.31	-0.4
2,653,401	+		IAI47_12620	0.31	-0.2
2,653,401	+		IAI47_12620	0.31	+0.4
2,653,401	+		IAI47_12620	0.31	-0.2
2,653,402	-		IAI47_12620	0.31	+0.8
2,653,402	-		IAI47_12620	0.31	-0.2
2,653,402	-		IAI47_12620	0.31	-0.4
2,653,444	-		IAI47_12620	0.33	-0.1
2,653,513	+		IAI47_12620	0.37	+0.4
2,653,513	+		IAI47_12620	0.37	+0.4
2,653,513	+		IAI47_12620	0.37	-0.3
2,653,513	+		IAI47_12620	0.37	-1.0
2,653,513	+		IAI47_12620	0.37	+1.6
2,653,513	+		IAI47_12620	0.37	-2.3
2,653,513	+		IAI47_12620	0.37	-2.2
2,653,514	-		IAI47_12620	0.37	-1.1
2,653,514	-		IAI47_12620	0.37	+0.2
2,653,514	-		IAI47_12620	0.37	+0.5
2,653,514	-		IAI47_12620	0.37	-0.1
2,653,514	-		IAI47_12620	0.37	-1.4
2,653,514	-		IAI47_12620	0.37	+1.6
2,653,514	-		IAI47_12620	0.37	+0.5
2,653,530	+		IAI47_12620	0.37	-3.1
2,653,530	+		IAI47_12620	0.37	-1.5
2,653,530	+		IAI47_12620	0.37	-0.7
2,653,530	+		IAI47_12620	0.37	+0.1
2,653,533	+		IAI47_12620	0.38	-1.6
2,653,533	+		IAI47_12620	0.38	+0.5
2,653,533	+		IAI47_12620	0.38	-0.6
2,653,534	-		IAI47_12620	0.38	-0.5
2,653,534	-		IAI47_12620	0.38	+1.3
2,653,534	-		IAI47_12620	0.38	+0.3
2,653,534	-		IAI47_12620	0.38	+1.9
2,653,656	+		IAI47_12620	0.44	-1.6
2,653,656	+		IAI47_12620	0.44	-0.8
2,653,698	+		IAI47_12620	0.46	+0.9
2,653,698	+		IAI47_12620	0.46	-1.7
2,653,698	+		IAI47_12620	0.46	-0.5
2,653,698	+		IAI47_12620	0.46	+0.1
2,653,699	-		IAI47_12620	0.46	-0.7
2,653,699	-		IAI47_12620	0.46	+0.3
2,653,699	-		IAI47_12620	0.46	+0.6
2,653,699	-		IAI47_12620	0.46	+0.1
2,653,804	+		IAI47_12620	0.51	-1.3
2,653,950	+		IAI47_12620	0.58	-0.3
2,653,950	+		IAI47_12620	0.58	-0.9
2,653,951	-		IAI47_12620	0.58	-1.2
2,653,951	-		IAI47_12620	0.58	+0.3
2,653,951	-		IAI47_12620	0.58	-0.7
2,653,951	-		IAI47_12620	0.58	+0.7
2,653,951	-		IAI47_12620	0.58	-0.5
2,653,953	+		IAI47_12620	0.58	-0.7
2,653,953	+		IAI47_12620	0.58	-0.1
2,653,954	-		IAI47_12620	0.58	+0.3
2,653,968	+		IAI47_12620	0.59	-0.3
2,653,968	+		IAI47_12620	0.59	+0.4
2,653,968	+		IAI47_12620	0.59	-0.1
2,653,968	+		IAI47_12620	0.59	+0.8
2,653,968	+		IAI47_12620	0.59	+1.2
2,653,969	-		IAI47_12620	0.59	+0.4
2,653,969	-		IAI47_12620	0.59	+0.3
2,653,969	-		IAI47_12620	0.59	-0.5
2,653,969	-		IAI47_12620	0.59	+1.1
2,653,971	+		IAI47_12620	0.59	+2.6
2,653,971	+		IAI47_12620	0.59	+0.4
2,653,971	+		IAI47_12620	0.59	-0.3
2,653,971	+		IAI47_12620	0.59	+1.4
2,653,972	-		IAI47_12620	0.59	-1.6
2,653,972	-		IAI47_12620	0.59	-0.6
2,653,972	-		IAI47_12620	0.59	+0.9
2,654,034	+		IAI47_12620	0.62	-0.6
2,654,034	+		IAI47_12620	0.62	-0.3
2,654,269	+		IAI47_12620	0.73	-0.2
2,654,269	+		IAI47_12620	0.73	-1.0
2,654,269	+		IAI47_12620	0.73	-0.2
2,654,269	+		IAI47_12620	0.73	+1.4
2,654,270	-		IAI47_12620	0.73	+0.0
2,654,270	-		IAI47_12620	0.73	+0.0
2,654,270	-		IAI47_12620	0.73	+1.0
2,654,270	-		IAI47_12620	0.73	-1.3
2,654,270	-		IAI47_12620	0.73	-0.6
2,654,270	-		IAI47_12620	0.73	+0.3
2,654,275	-		IAI47_12620	0.74	+0.7
2,654,385	+		IAI47_12620	0.79	-0.8
2,654,386	-		IAI47_12620	0.79	+0.3
2,654,509	+		IAI47_12620	0.85	-0.2
2,654,510	-		IAI47_12620	0.85	-1.8
2,654,567	+		IAI47_12620	0.88	-0.8
2,654,567	+		IAI47_12620	0.88	-0.3
2,654,568	-		IAI47_12620	0.88	-0.3
2,654,568	-		IAI47_12620	0.88	-0.7
2,654,656	+				+0.9
2,654,657	-				-0.1
2,654,657	-				+0.4
2,654,686	+				-0.6
2,654,708	+				+1.0
2,654,709	-				+0.2
2,654,709	-				+0.3
2,654,709	-				-0.9
2,654,709	-				+0.2
2,654,709	-				-0.2
2,654,709	-				-0.4
2,654,709	-				+0.3
2,654,719	-				+0.7
2,654,719	-				-0.4
2,654,763	+				-0.9
2,654,763	+				+0.7
2,654,763	+				-0.1
2,654,763	+				-0.1
2,654,763	+				+1.7
2,654,763	+				+0.6
2,654,764	-				+0.0
2,654,764	-				-0.7
2,654,764	-				+0.7
2,654,765	+				-0.7
2,654,765	+				+0.4
2,654,765	+				-0.3
2,654,765	+				-0.8
2,654,765	+				+0.5
2,654,765	+				-0.3
2,654,766	-				+0.7
2,654,766	-				-1.0
2,654,766	-				+0.1
2,654,766	-				+2.4
2,654,766	-				+0.1
2,654,766	-				+0.4
2,654,833	+				+0.2
2,654,834	-				+2.0
2,654,843	-				+0.2
2,654,843	-				-0.0
2,654,843	-				-0.7
2,654,853	+				+0.7
2,654,853	+				-0.4
2,654,853	+				-0.7
2,654,854	-				-0.4
2,654,854	-				+0.6
2,654,854	-				-0.7
2,654,854	-				+0.7
2,654,854	-				+1.5
2,654,868	+				-0.0
2,654,882	+				+0.8
2,654,883	-				+3.6
2,654,892	+				-1.5
2,654,892	+				+0.0
2,654,892	+				-0.3
2,654,892	+				+0.0
2,654,892	+				-0.6
2,654,893	-				-1.0
2,654,893	-				-0.7
2,654,893	-				+0.3
2,654,893	-				+0.2
2,654,893	-				-0.6
2,654,951	+				-0.2
2,654,951	+				+0.6
2,654,951	+				-0.3
2,654,955	+				+0.3
2,654,956	-				+0.3
2,654,962	-				-0.3
2,655,014	+		IAI47_12625	0.17	+0.0
2,655,014	+		IAI47_12625	0.17	+0.3
2,655,014	+		IAI47_12625	0.17	+0.8
2,655,014	+		IAI47_12625	0.17	-1.4
2,655,014	+		IAI47_12625	0.17	+0.1
2,655,014	+		IAI47_12625	0.17	-0.2
2,655,014	+		IAI47_12625	0.17	+1.3
2,655,015	-		IAI47_12625	0.17	+0.6
2,655,015	-		IAI47_12625	0.17	+0.8
2,655,015	-		IAI47_12625	0.17	-1.3
2,655,015	-		IAI47_12625	0.17	-2.1
2,655,015	-		IAI47_12625	0.17	+1.0
2,655,070	-		IAI47_12625	0.30	-0.1
2,655,135	+		IAI47_12625	0.45	-1.1
2,655,135	+		IAI47_12625	0.45	-0.6
2,655,135	+		IAI47_12625	0.45	-0.5
2,655,135	+		IAI47_12625	0.45	+0.6
2,655,135	+		IAI47_12625	0.45	+0.8
2,655,135	+		IAI47_12625	0.45	-0.5
2,655,136	-		IAI47_12625	0.45	+0.7
2,655,136	-		IAI47_12625	0.45	-2.5
2,655,136	-		IAI47_12625	0.45	-1.5
2,655,136	-		IAI47_12625	0.45	+0.1
2,655,136	-		IAI47_12625	0.45	-0.9
2,655,144	+		IAI47_12625	0.47	+0.3
2,655,144	+		IAI47_12625	0.47	-0.5
2,655,145	-		IAI47_12625	0.47	+1.4
2,655,145	-		IAI47_12625	0.47	-0.5
2,655,219	+		IAI47_12625	0.64	-0.7
2,655,219	+		IAI47_12625	0.64	+0.1
2,655,219	+		IAI47_12625	0.64	-0.3
2,655,219	+		IAI47_12625	0.64	-0.0
2,655,219	+		IAI47_12625	0.64	+1.6
2,655,219	+		IAI47_12625	0.64	+0.6
2,655,220	-		IAI47_12625	0.64	-1.3
2,655,220	-		IAI47_12625	0.64	-1.9
2,655,220	-		IAI47_12625	0.64	+0.4
2,655,220	-		IAI47_12625	0.64	-0.8
2,655,220	-		IAI47_12625	0.64	+0.1
2,655,282	+		IAI47_12625	0.78	+2.6
2,655,282	+		IAI47_12625	0.78	+0.5
2,655,282	+		IAI47_12625	0.78	+1.4
2,655,376	+				-0.1
2,655,376	+				-0.8
2,655,376	+				-2.8
2,655,376	+				-0.5
2,655,377	-				+0.3
2,655,377	-				-2.2
2,655,377	-				-2.2
2,655,377	-				-2.1
2,655,377	-				-0.1
2,655,379	+				-0.5
2,655,379	+				+4.2
2,655,379	+				-0.1
2,655,379	+				-0.0
2,655,379	+				-0.2
2,655,379	+				+0.9
2,655,379	+				-0.3
2,655,379	+				-2.1
2,655,380	-				-1.0
2,655,380	-				+1.1
2,655,380	-				-1.1
2,655,380	-				-0.4
2,655,380	-				-0.7
2,655,380	-				+0.6
2,655,380	-				-0.5
2,655,422	-				-2.9
2,655,422	-				-1.6
2,655,424	+				-1.0
2,655,424	+				-0.2
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