Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c01020

Experiment: m.b. methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. methylglyoxal 0.008 vol%
95,940	+		PGA1_c01010	0.55	-0.3
95,950	-		PGA1_c01010	0.56	-1.8
95,951	-		PGA1_c01010	0.56	+0.4
95,961	+		PGA1_c01010	0.56	-1.8
95,961	+		PGA1_c01010	0.56	-2.7
95,961	+		PGA1_c01010	0.56	-2.0
95,961	+		PGA1_c01010	0.56	+0.2
95,969	-		PGA1_c01010	0.57	-1.5
95,969	-		PGA1_c01010	0.57	-0.7
95,969	-		PGA1_c01010	0.57	-1.5
95,969	-		PGA1_c01010	0.57	+0.3
95,969	-		PGA1_c01010	0.57	-1.4
95,977	-		PGA1_c01010	0.57	-1.3
95,991	-		PGA1_c01010	0.58	-0.6
95,998	+		PGA1_c01010	0.58	-0.5
95,998	+		PGA1_c01010	0.58	-1.1
96,021	-		PGA1_c01010	0.59	-1.3
96,031	-		PGA1_c01010	0.59	-0.7
96,067	+		PGA1_c01010	0.61	-0.5
96,075	-		PGA1_c01010	0.62	-1.1
96,075	-		PGA1_c01010	0.62	-0.8
96,131	+		PGA1_c01010	0.64	-0.3
96,159	-		PGA1_c01010	0.65	-0.2
96,262	+		PGA1_c01010	0.70	-0.5
96,296	+		PGA1_c01010	0.72	+0.9
96,298	+		PGA1_c01010	0.72	-0.4
96,298	+		PGA1_c01010	0.72	+0.0
96,298	+		PGA1_c01010	0.72	-0.5
96,304	-		PGA1_c01010	0.72	-1.5
96,304	-		PGA1_c01010	0.72	-0.6
96,306	-		PGA1_c01010	0.72	-2.5
96,380	+		PGA1_c01010	0.76	-0.6
96,388	-		PGA1_c01010	0.76	+0.2
96,388	-		PGA1_c01010	0.76	-1.2
96,388	-		PGA1_c01010	0.76	-1.3
96,412	+		PGA1_c01010	0.77	-0.8
96,412	-		PGA1_c01010	0.77	-0.3
96,430	+		PGA1_c01010	0.78	-1.1
96,448	+		PGA1_c01010	0.79	+0.6
96,456	-		PGA1_c01010	0.79	-0.5
96,456	-		PGA1_c01010	0.79	+0.3
96,515	+		PGA1_c01010	0.82	-1.7
96,535	-		PGA1_c01010	0.83	-1.8
96,535	-		PGA1_c01010	0.83	-2.0
96,567	+		PGA1_c01010	0.85	-1.4
96,567	+		PGA1_c01010	0.85	-1.2
96,600	+		PGA1_c01010	0.86	-2.2
96,618	-		PGA1_c01010	0.87	-0.7
96,628	+		PGA1_c01010	0.87	-0.5
96,635	+		PGA1_c01010	0.88	-0.6
96,643	-		PGA1_c01010	0.88	-0.4
96,673	+		PGA1_c01010	0.90	-2.6
96,673	+		PGA1_c01010	0.90	-2.3
96,673	+		PGA1_c01010	0.90	-1.2
96,673	+		PGA1_c01010	0.90	-0.4
96,673	+		PGA1_c01010	0.90	-0.8
96,681	-				-1.2
96,681	-				+0.1
96,681	-				+0.1
96,684	+				-0.1
96,684	+				-0.8
96,692	-				-0.2
96,727	-				-0.2
96,858	-				-0.0
96,858	-				+0.6
96,858	-				-0.6
97,487	+		PGA1_c01020	0.85	-0.8
97,559	+				-1.0
97,575	+				-0.3
97,621	+				+0.4
97,621	+				+1.2
97,629	-				+0.4
97,631	+				-0.9
97,642	+				+1.5
98,481	-				-0.6
98,488	+				-0.1
98,491	-				-0.5
98,496	-				+0.4
98,496	-				-0.2
98,496	-				+0.4
98,498	+				-0.5
98,505	+				-0.2
98,513	+				+0.6
98,554	+		PGA1_c01040	0.12	-0.1