Experiment: MoLS4 with L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ribF and DVU0451 are separated by 4 nucleotides DVU0451 and DVU0452 are separated by 139 nucleotides
DVU0450: ribF - riboflavin biosynthesis protein RibF (TIGR), at 514,816 to 515,760
ribF
DVU0451: DVU0451 - chloride channel family protein (TIGR), at 515,765 to 517,576
DVU0451
DVU0452: DVU0452 - hypothetical protein (TIGR), at 517,716 to 518,939
DVU0452
Position (kb) 515
516
517
518 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 514.802 kb on - strand at 515.765 kb on + strand at 515.814 kb on - strand at 515.850 kb on - strand at 515.864 kb on + strand at 515.864 kb on + strand at 515.872 kb on - strand at 515.872 kb on - strand at 515.872 kb on - strand at 515.917 kb on + strand at 516.084 kb on + strand, within DVU0451 at 516.092 kb on + strand, within DVU0451 at 516.184 kb on - strand, within DVU0451 at 516.191 kb on - strand, within DVU0451 at 516.259 kb on - strand, within DVU0451 at 516.284 kb on - strand, within DVU0451 at 516.291 kb on - strand, within DVU0451 at 516.353 kb on - strand, within DVU0451 at 516.369 kb on + strand, within DVU0451 at 516.451 kb on - strand, within DVU0451 at 516.556 kb on + strand, within DVU0451 at 516.556 kb on + strand, within DVU0451 at 516.564 kb on - strand, within DVU0451 at 516.584 kb on - strand, within DVU0451 at 516.599 kb on - strand, within DVU0451 at 516.599 kb on - strand, within DVU0451 at 516.673 kb on + strand, within DVU0451 at 516.719 kb on + strand, within DVU0451 at 516.727 kb on - strand, within DVU0451 at 516.729 kb on + strand, within DVU0451 at 516.739 kb on + strand, within DVU0451 at 516.812 kb on + strand, within DVU0451 at 516.841 kb on - strand, within DVU0451 at 516.971 kb on + strand, within DVU0451 at 516.985 kb on - strand, within DVU0451 at 516.995 kb on - strand, within DVU0451 at 517.024 kb on + strand, within DVU0451 at 517.062 kb on - strand, within DVU0451 at 517.062 kb on - strand, within DVU0451 at 517.096 kb on - strand, within DVU0451 at 517.096 kb on - strand, within DVU0451 at 517.158 kb on + strand, within DVU0451 at 517.205 kb on + strand, within DVU0451 at 517.267 kb on - strand, within DVU0451 at 517.268 kb on + strand, within DVU0451 at 517.365 kb on + strand, within DVU0451 at 517.423 kb on + strand at 517.423 kb on + strand at 517.446 kb on - strand at 517.457 kb on + strand at 517.531 kb on + strand at 517.539 kb on - strand at 517.539 kb on - strand at 517.539 kb on - strand at 517.614 kb on + strand at 517.622 kb on + strand at 517.639 kb on - strand at 517.683 kb on + strand at 517.760 kb on - strand at 517.798 kb on + strand at 517.833 kb on + strand at 517.838 kb on + strand at 517.840 kb on - strand, within DVU0452 at 517.851 kb on - strand, within DVU0452 at 517.893 kb on + strand, within DVU0452 at 517.955 kb on - strand, within DVU0452 at 518.180 kb on - strand, within DVU0452 at 518.208 kb on + strand, within DVU0452 at 518.234 kb on - strand, within DVU0452 at 518.257 kb on - strand, within DVU0452 at 518.259 kb on - strand, within DVU0452 at 518.301 kb on + strand, within DVU0452 at 518.331 kb on - strand, within DVU0452 at 518.406 kb on - strand, within DVU0452 at 518.444 kb on + strand, within DVU0452 at 518.473 kb on + strand, within DVU0452 at 518.563 kb on + strand, within DVU0452
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Alanine (N) remove 514,802 - -0.1 515,765 + +1.8 515,814 - +2.9 515,850 - +3.4 515,864 + +3.6 515,864 + +3.4 515,872 - +3.4 515,872 - +2.3 515,872 - +2.9 515,917 + +3.0 516,084 + DVU0451 0.18 +3.4 516,092 + DVU0451 0.18 +3.4 516,184 - DVU0451 0.23 +3.4 516,191 - DVU0451 0.24 +3.6 516,259 - DVU0451 0.27 +3.2 516,284 - DVU0451 0.29 +3.1 516,291 - DVU0451 0.29 +2.8 516,353 - DVU0451 0.32 +3.4 516,369 + DVU0451 0.33 +3.5 516,451 - DVU0451 0.38 +3.6 516,556 + DVU0451 0.44 +2.9 516,556 + DVU0451 0.44 +3.6 516,564 - DVU0451 0.44 +3.3 516,584 - DVU0451 0.45 +3.6 516,599 - DVU0451 0.46 +3.5 516,599 - DVU0451 0.46 +3.6 516,673 + DVU0451 0.50 +2.8 516,719 + DVU0451 0.53 +3.2 516,727 - DVU0451 0.53 +3.3 516,729 + DVU0451 0.53 +3.3 516,739 + DVU0451 0.54 +3.6 516,812 + DVU0451 0.58 +3.2 516,841 - DVU0451 0.59 +3.3 516,971 + DVU0451 0.67 +3.3 516,985 - DVU0451 0.67 +1.8 516,995 - DVU0451 0.68 +3.6 517,024 + DVU0451 0.69 +3.5 517,062 - DVU0451 0.72 +3.6 517,062 - DVU0451 0.72 +3.4 517,096 - DVU0451 0.73 +4.0 517,096 - DVU0451 0.73 +3.3 517,158 + DVU0451 0.77 +3.2 517,205 + DVU0451 0.79 +2.9 517,267 - DVU0451 0.83 +2.9 517,268 + DVU0451 0.83 +3.3 517,365 + DVU0451 0.88 +3.5 517,423 + +3.3 517,423 + +3.4 517,446 - +1.6 517,457 + +3.3 517,531 + +2.0 517,539 - +2.5 517,539 - +2.5 517,539 - +2.7 517,614 + -0.5 517,622 + -0.7 517,639 - -0.7 517,683 + +2.1 517,760 - -0.3 517,798 + -1.1 517,833 + +0.9 517,838 + +0.0 517,840 - DVU0452 0.10 -0.4 517,851 - DVU0452 0.11 -1.9 517,893 + DVU0452 0.14 +0.6 517,955 - DVU0452 0.20 +0.5 518,180 - DVU0452 0.38 -0.3 518,208 + DVU0452 0.40 +0.1 518,234 - DVU0452 0.42 +1.2 518,257 - DVU0452 0.44 -0.3 518,259 - DVU0452 0.44 -1.1 518,301 + DVU0452 0.48 +1.4 518,331 - DVU0452 0.50 +0.1 518,406 - DVU0452 0.56 +0.3 518,444 + DVU0452 0.59 -1.1 518,473 + DVU0452 0.62 -0.1 518,563 + DVU0452 0.69 -2.8
Or see this region's nucleotide sequence