Experiment: MoLS4 with L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0358 and DVU0359 are separated by 282 nucleotides DVU0359 and ilvB-1 are separated by 696 nucleotides
DVU0358: DVU0358 - hypothetical protein (TIGR), at 407,342 to 408,085
DVU0358
DVU0359: DVU0359 - HesB-like domain (TIGR), at 408,368 to 408,694
DVU0359
DVU0360: ilvB-1 - acetolactate synthase, large subunit, biosynthetic type (TIGR), at 409,391 to 411,082
ilvB-1
Position (kb) 408
409 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 407.502 kb on - strand, within DVU0358 at 407.595 kb on - strand, within DVU0358 at 407.595 kb on - strand, within DVU0358 at 407.711 kb on - strand, within DVU0358 at 407.758 kb on - strand, within DVU0358 at 407.881 kb on + strand, within DVU0358 at 407.889 kb on - strand, within DVU0358 at 407.923 kb on - strand, within DVU0358 at 407.928 kb on - strand, within DVU0358 at 407.933 kb on - strand, within DVU0358 at 407.985 kb on + strand, within DVU0358 at 407.998 kb on - strand, within DVU0358 at 408.109 kb on + strand at 408.116 kb on + strand at 408.124 kb on - strand at 408.142 kb on - strand at 408.165 kb on - strand at 408.313 kb on + strand at 408.379 kb on - strand at 408.482 kb on + strand, within DVU0359 at 408.514 kb on + strand, within DVU0359 at 408.551 kb on + strand, within DVU0359 at 408.628 kb on - strand, within DVU0359 at 408.846 kb on - strand at 408.934 kb on + strand at 408.942 kb on - strand at 408.975 kb on + strand at 409.019 kb on - strand at 409.021 kb on + strand at 409.022 kb on + strand at 409.071 kb on + strand at 409.116 kb on - strand at 409.128 kb on - strand at 409.148 kb on + strand at 409.338 kb on + strand at 409.345 kb on - strand at 409.345 kb on - strand at 409.346 kb on - strand at 409.436 kb on + strand at 409.486 kb on + strand at 409.526 kb on + strand at 409.534 kb on - strand at 409.536 kb on + strand at 409.536 kb on + strand at 409.544 kb on - strand at 409.544 kb on - strand at 409.557 kb on + strand at 409.576 kb on - strand, within ilvB-1 at 409.620 kb on - strand, within ilvB-1
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Alanine (N) remove 407,502 - DVU0358 0.22 -0.1 407,595 - DVU0358 0.34 +0.7 407,595 - DVU0358 0.34 -0.1 407,711 - DVU0358 0.50 -0.7 407,758 - DVU0358 0.56 +0.2 407,881 + DVU0358 0.72 -0.4 407,889 - DVU0358 0.74 +1.3 407,923 - DVU0358 0.78 -1.3 407,928 - DVU0358 0.79 -0.3 407,933 - DVU0358 0.79 +0.3 407,985 + DVU0358 0.86 +1.1 407,998 - DVU0358 0.88 -2.5 408,109 + -0.2 408,116 + -1.0 408,124 - +0.6 408,142 - +1.3 408,165 - +1.2 408,313 + +0.2 408,379 - -0.9 408,482 + DVU0359 0.35 -0.8 408,514 + DVU0359 0.45 -0.4 408,551 + DVU0359 0.56 +1.1 408,628 - DVU0359 0.80 -1.0 408,846 - +0.3 408,934 + +1.0 408,942 - -0.6 408,975 + +0.1 409,019 - -0.3 409,021 + +1.0 409,022 + -0.5 409,071 + -1.6 409,116 - +0.1 409,128 - -0.0 409,148 + -1.1 409,338 + -2.8 409,345 - -1.5 409,345 - -2.7 409,346 - -2.3 409,436 + -2.0 409,486 + -2.4 409,526 + -1.1 409,534 - -1.5 409,536 + -2.1 409,536 + -2.3 409,544 - -2.8 409,544 - -3.7 409,557 + +0.5 409,576 - ilvB-1 DVU0360 0.11 -1.7 409,620 - ilvB-1 DVU0360 0.14 -1.3
Or see this region's nucleotide sequence