Strain Fitness in Pantoea sp. MT58 around IAI47_12615

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
2,651,309	+		IAI47_12605	0.75	+0.6
2,651,309	+		IAI47_12605	0.75	-0.3
2,651,309	+		IAI47_12605	0.75	+0.4
2,651,309	+		IAI47_12605	0.75	+0.4
2,651,309	+		IAI47_12605	0.75	-0.4
2,651,310	-		IAI47_12605	0.75	+0.9
2,651,310	-		IAI47_12605	0.75	-0.7
2,651,310	-		IAI47_12605	0.75	-0.9
2,651,310	-		IAI47_12605	0.75	+0.9
2,651,310	-		IAI47_12605	0.75	-0.2
2,651,324	+		IAI47_12605	0.79	-0.1
2,651,325	-		IAI47_12605	0.79	-0.8
2,651,325	-		IAI47_12605	0.79	-1.0
2,651,325	-		IAI47_12605	0.79	-1.1
2,651,325	-		IAI47_12605	0.79	-1.4
2,651,325	-		IAI47_12605	0.79	-0.2
2,651,359	+		IAI47_12605	0.87	-1.3
2,651,359	+		IAI47_12605	0.87	-0.6
2,651,359	+		IAI47_12605	0.87	+0.2
2,651,360	-		IAI47_12605	0.87	-0.5
2,651,360	-		IAI47_12605	0.87	-1.0
2,651,367	+		IAI47_12605	0.89	-1.0
2,651,368	-		IAI47_12605	0.89	-2.8
2,651,368	-		IAI47_12605	0.89	-0.4
2,651,368	-		IAI47_12605	0.89	-0.2
2,651,443	+				+0.6
2,651,443	+				+0.2
2,651,443	+				-0.8
2,651,443	+				+0.2
2,651,443	+				+1.4
2,651,443	+				+1.5
2,651,444	-				+0.5
2,651,444	-				+0.7
2,651,444	-				+1.0
2,651,444	-				-0.7
2,651,444	-				+0.2
2,651,444	-				+0.3
2,651,444	-				+1.8
2,651,444	-				+0.3
2,651,484	+				-0.4
2,651,484	+				-1.3
2,651,484	+				-0.5
2,651,485	-				+0.1
2,651,485	-				+1.4
2,651,485	-				+0.6
2,651,485	-				-1.1
2,651,504	+				-0.7
2,651,504	+				+0.5
2,651,504	+				-0.1
2,651,509	-				-0.6
2,651,509	-				+0.5
2,651,525	+				-0.1
2,651,576	+				+1.3
2,651,618	-				-0.5
2,651,621	+				+0.1
2,651,621	+				+0.4
2,651,621	+				+1.6
2,651,621	+				-1.1
2,651,621	+				+0.6
2,651,621	+				-0.2
2,651,621	+				-1.7
2,651,622	-				-0.5
2,651,622	-				+1.3
2,651,622	-				+0.7
2,651,622	-				-1.5
2,651,622	-				+0.6
2,651,622	-				-0.1
2,651,622	-				-0.2
2,651,622	-				+1.1
2,651,622	-				-0.5
2,651,622	-				+1.4
2,651,622	-				-1.2
2,651,622	-				+0.3
2,651,622	-				-0.7
2,651,622	-				-0.4
2,651,622	-				-0.0
2,651,622	-				+1.9
2,651,659	+		IAI47_12610	0.11	+0.6
2,651,659	+		IAI47_12610	0.11	-0.4
2,651,660	-		IAI47_12610	0.11	+0.0
2,651,660	-		IAI47_12610	0.11	-0.2
2,651,683	+		IAI47_12610	0.15	+1.5
2,651,683	+		IAI47_12610	0.15	+2.4
2,651,683	+		IAI47_12610	0.15	+1.5
2,651,684	-		IAI47_12610	0.15	-1.5
2,651,684	-		IAI47_12610	0.15	-0.5
2,651,684	-		IAI47_12610	0.15	-0.3
2,651,684	-		IAI47_12610	0.15	-0.5
2,651,684	-		IAI47_12610	0.15	-1.2
2,651,684	-		IAI47_12610	0.15	-0.1
2,651,820	+		IAI47_12610	0.36	+1.6
2,651,821	-		IAI47_12610	0.36	-0.0
2,651,870	+		IAI47_12610	0.44	+0.2
2,651,870	+		IAI47_12610	0.44	+0.4
2,651,870	+		IAI47_12610	0.44	-0.0
2,651,871	-		IAI47_12610	0.44	+0.6
2,651,871	-		IAI47_12610	0.44	+1.0
2,651,873	+		IAI47_12610	0.44	+0.2
2,651,873	+		IAI47_12610	0.44	-0.5
2,651,873	+		IAI47_12610	0.44	-0.2
2,651,873	+		IAI47_12610	0.44	+0.4
2,651,874	-		IAI47_12610	0.44	+1.0
2,651,910	+		IAI47_12610	0.50	+0.4
2,651,911	-		IAI47_12610	0.50	+0.7
2,651,930	+		IAI47_12610	0.53	+0.4
2,651,930	+		IAI47_12610	0.53	+0.8
2,651,930	+		IAI47_12610	0.53	-0.3
2,651,931	-		IAI47_12610	0.53	+0.8
2,651,931	-		IAI47_12610	0.53	-0.5
2,651,931	-		IAI47_12610	0.53	+0.7
2,651,967	-		IAI47_12610	0.59	+1.8
2,651,967	-		IAI47_12610	0.59	-0.1
2,651,967	-		IAI47_12610	0.59	+0.9
2,652,030	+		IAI47_12610	0.69	-1.2
2,652,030	+		IAI47_12610	0.69	-1.7
2,652,030	+		IAI47_12610	0.69	-0.6
2,652,031	-		IAI47_12610	0.69	+2.0
2,652,107	+		IAI47_12610	0.81	+0.3
2,652,198	-				+0.7
2,652,217	+				+0.6
2,652,217	+				+0.9
2,652,218	-				-0.3
2,652,222	-				-1.2
2,652,222	-				-0.1
2,652,231	+				+1.3
2,652,237	+				-1.2
2,652,251	+				-1.2
2,652,299	+				-1.4
2,652,300	-				+1.8
2,652,300	-				+0.6
2,652,300	-				+0.0
2,652,331	+				-2.2
2,652,332	-				+1.3
2,652,332	-				+0.1
2,652,332	-				-0.4
2,652,332	-				-0.5
2,652,339	-				-0.8
2,652,426	+		IAI47_12615	0.27	+0.0
2,652,426	+		IAI47_12615	0.27	+0.4
2,652,427	-		IAI47_12615	0.28	+0.1
2,652,455	+		IAI47_12615	0.34	+2.3
2,652,455	+		IAI47_12615	0.34	+0.2
2,652,456	-		IAI47_12615	0.34	-0.6
2,652,638	+		IAI47_12615	0.74	+0.8
2,652,674	+		IAI47_12615	0.81	-0.4
2,652,674	+		IAI47_12615	0.81	+0.9
2,652,674	+		IAI47_12615	0.81	-0.9
2,652,675	-		IAI47_12615	0.82	-0.1
2,652,675	-		IAI47_12615	0.82	-0.3
2,652,675	-		IAI47_12615	0.82	+0.7
2,652,675	-		IAI47_12615	0.82	-0.1
2,652,675	-		IAI47_12615	0.82	-0.3
2,652,677	+		IAI47_12615	0.82	+0.4
2,652,677	+		IAI47_12615	0.82	-0.3
2,652,677	+		IAI47_12615	0.82	+1.3
2,652,678	-		IAI47_12615	0.82	-0.7
2,652,678	-		IAI47_12615	0.82	-0.1
2,652,678	-		IAI47_12615	0.82	-1.6
2,652,713	+				+0.6
2,652,714	-				-1.2
2,652,714	-				+0.5
2,652,714	-				+0.2
2,652,735	+				+0.5
2,652,735	+				-0.1
2,652,735	+				-0.3
2,652,756	+				+1.4
2,652,756	+				-1.7
2,652,757	-				+0.5
2,652,768	+				+0.5
2,652,768	+				+1.7
2,652,769	-				-0.0
2,652,776	-				-0.0
2,652,776	-				-1.7
2,652,839	-				-0.1
2,652,839	-				-0.4
2,652,876	-				+0.2
2,652,876	-				-0.8
2,652,876	-				-1.2
2,652,876	-				-0.2
2,652,925	-				+0.4
2,652,926	-				+1.2
2,652,939	+				-0.1
2,652,940	-				+0.8
2,652,985	+		IAI47_12620	0.11	-0.1
2,652,986	-		IAI47_12620	0.11	-0.0
2,653,004	+		IAI47_12620	0.12	-0.7
2,653,004	+		IAI47_12620	0.12	-0.0
2,653,004	+		IAI47_12620	0.12	+0.4
2,653,005	-		IAI47_12620	0.12	-0.7
2,653,005	-		IAI47_12620	0.12	+0.3
2,653,041	+		IAI47_12620	0.14	+1.4
2,653,041	+		IAI47_12620	0.14	-1.0
2,653,042	-		IAI47_12620	0.14	+0.8
2,653,042	-		IAI47_12620	0.14	-1.7
2,653,042	-		IAI47_12620	0.14	-1.2
2,653,081	-		IAI47_12620	0.16	+0.1
2,653,087	+		IAI47_12620	0.16	-0.3
2,653,087	+		IAI47_12620	0.16	-0.5
2,653,087	+		IAI47_12620	0.16	+0.1
2,653,087	+		IAI47_12620	0.16	+0.2
2,653,088	-		IAI47_12620	0.16	-0.7
2,653,088	-		IAI47_12620	0.16	-1.8
2,653,103	+		IAI47_12620	0.17	+0.1
2,653,103	+		IAI47_12620	0.17	-1.1
2,653,104	-		IAI47_12620	0.17	+1.2
2,653,128	+		IAI47_12620	0.18	-0.2
2,653,128	+		IAI47_12620	0.18	+1.6
2,653,129	-		IAI47_12620	0.18	-1.0
2,653,129	-		IAI47_12620	0.18	-0.5
2,653,213	-		IAI47_12620	0.22	-2.1
2,653,213	-		IAI47_12620	0.22	-0.1
2,653,213	-		IAI47_12620	0.22	-0.1
2,653,213	-		IAI47_12620	0.22	-0.6
2,653,230	+		IAI47_12620	0.23	+2.2
2,653,278	+		IAI47_12620	0.25	+0.3
2,653,278	+		IAI47_12620	0.25	-0.1
2,653,279	-		IAI47_12620	0.25	+0.6
2,653,279	-		IAI47_12620	0.25	+0.0
2,653,311	-		IAI47_12620	0.27	+0.3
2,653,311	-		IAI47_12620	0.27	-0.2
2,653,349	+		IAI47_12620	0.29	-2.0
2,653,350	-		IAI47_12620	0.29	+0.5
2,653,398	-		IAI47_12620	0.31	-0.2
2,653,398	-		IAI47_12620	0.31	+0.1
2,653,398	-		IAI47_12620	0.31	-0.0
2,653,401	+		IAI47_12620	0.31	+0.8
2,653,401	+		IAI47_12620	0.31	-0.7
2,653,401	+		IAI47_12620	0.31	-0.8
2,653,401	+		IAI47_12620	0.31	-0.7
2,653,401	+		IAI47_12620	0.31	-1.4
2,653,402	-		IAI47_12620	0.31	-0.7
2,653,402	-		IAI47_12620	0.31	-0.0
2,653,402	-		IAI47_12620	0.31	+0.7
2,653,444	-		IAI47_12620	0.33	-0.9
2,653,513	+		IAI47_12620	0.37	-1.3
2,653,513	+		IAI47_12620	0.37	+1.0
2,653,513	+		IAI47_12620	0.37	-0.0
2,653,513	+		IAI47_12620	0.37	-1.0
2,653,513	+		IAI47_12620	0.37	+0.5
2,653,513	+		IAI47_12620	0.37	-1.3
2,653,513	+		IAI47_12620	0.37	-2.1
2,653,514	-		IAI47_12620	0.37	-0.5
2,653,514	-		IAI47_12620	0.37	-0.2
2,653,514	-		IAI47_12620	0.37	+0.5
2,653,514	-		IAI47_12620	0.37	-0.2
2,653,514	-		IAI47_12620	0.37	+0.9
2,653,514	-		IAI47_12620	0.37	+1.6
2,653,514	-		IAI47_12620	0.37	+1.7
2,653,530	+		IAI47_12620	0.37	-0.5
2,653,530	+		IAI47_12620	0.37	+0.1
2,653,530	+		IAI47_12620	0.37	+0.3
2,653,530	+		IAI47_12620	0.37	+0.2
2,653,533	+		IAI47_12620	0.38	+0.4
2,653,533	+		IAI47_12620	0.38	+0.9
2,653,533	+		IAI47_12620	0.38	+0.5
2,653,534	-		IAI47_12620	0.38	-1.0
2,653,534	-		IAI47_12620	0.38	-1.5
2,653,534	-		IAI47_12620	0.38	-1.3
2,653,534	-		IAI47_12620	0.38	-0.1
2,653,656	+		IAI47_12620	0.44	-1.5
2,653,656	+		IAI47_12620	0.44	-1.4
2,653,698	+		IAI47_12620	0.46	-0.4
2,653,698	+		IAI47_12620	0.46	-0.1
2,653,698	+		IAI47_12620	0.46	+0.5
2,653,698	+		IAI47_12620	0.46	-0.8
2,653,699	-		IAI47_12620	0.46	+0.1
2,653,699	-		IAI47_12620	0.46	+0.3
2,653,699	-		IAI47_12620	0.46	-0.4
2,653,699	-		IAI47_12620	0.46	+0.4