Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_00785 and IAI47_00790 are separated by 161 nucleotides IAI47_00790 and IAI47_00795 are separated by 28 nucleotides IAI47_00795 and IAI47_00800 are separated by 120 nucleotides IAI47_00800 and IAI47_00805 are separated by 98 nucleotides
IAI47_00785: IAI47_00785 - sulfate ABC transporter substrate-binding protein, at 166,212 to 167,201
_00785
IAI47_00790: IAI47_00790 - CDP-diacylglycerol diphosphatase, at 167,363 to 168,136
_00790
IAI47_00795: IAI47_00795 - triose-phosphate isomerase, at 168,165 to 168,932
_00795
IAI47_00800: IAI47_00800 - YiiQ family protein, at 169,053 to 169,643
_00800
IAI47_00805: IAI47_00805 - DUF805 domain-containing protein, at 169,742 to 170,176
_00805
Position (kb) 168
169 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 167.178 kb on + strand at 167.178 kb on + strand at 167.178 kb on + strand at 167.178 kb on + strand at 167.178 kb on + strand at 167.178 kb on + strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.179 kb on - strand at 167.199 kb on + strand at 167.199 kb on + strand at 167.200 kb on - strand at 167.200 kb on - strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.202 kb on + strand at 167.203 kb on - strand at 167.203 kb on - strand at 167.203 kb on - strand at 167.203 kb on - strand at 167.203 kb on - strand at 167.203 kb on - strand at 167.203 kb on - strand at 167.203 kb on - strand at 167.340 kb on + strand at 167.340 kb on + strand at 167.362 kb on + strand at 167.362 kb on + strand at 167.362 kb on + strand at 167.363 kb on - strand at 167.363 kb on - strand at 167.363 kb on - strand at 167.427 kb on + strand at 167.557 kb on + strand, within IAI47_00790 at 167.558 kb on + strand, within IAI47_00790 at 167.559 kb on - strand, within IAI47_00790 at 167.559 kb on - strand, within IAI47_00790 at 167.559 kb on - strand, within IAI47_00790 at 167.559 kb on - strand, within IAI47_00790 at 167.575 kb on + strand, within IAI47_00790 at 167.575 kb on + strand, within IAI47_00790 at 167.575 kb on + strand, within IAI47_00790 at 167.575 kb on + strand, within IAI47_00790 at 167.575 kb on + strand, within IAI47_00790 at 167.576 kb on - strand, within IAI47_00790 at 167.576 kb on - strand, within IAI47_00790 at 167.576 kb on - strand at 167.594 kb on + strand, within IAI47_00790 at 167.594 kb on + strand, within IAI47_00790 at 167.595 kb on - strand, within IAI47_00790 at 167.595 kb on - strand, within IAI47_00790 at 167.657 kb on - strand, within IAI47_00790 at 167.657 kb on - strand, within IAI47_00790 at 167.657 kb on - strand, within IAI47_00790 at 167.666 kb on + strand, within IAI47_00790 at 167.666 kb on + strand, within IAI47_00790 at 167.666 kb on + strand, within IAI47_00790 at 167.667 kb on - strand, within IAI47_00790 at 167.762 kb on + strand, within IAI47_00790 at 167.762 kb on + strand, within IAI47_00790 at 167.788 kb on + strand, within IAI47_00790 at 167.788 kb on + strand, within IAI47_00790 at 167.789 kb on - strand, within IAI47_00790 at 167.789 kb on - strand, within IAI47_00790 at 167.789 kb on - strand, within IAI47_00790 at 167.789 kb on - strand, within IAI47_00790 at 167.872 kb on + strand, within IAI47_00790 at 167.873 kb on - strand, within IAI47_00790 at 167.873 kb on - strand, within IAI47_00790 at 167.873 kb on - strand, within IAI47_00790 at 167.873 kb on - strand, within IAI47_00790 at 167.873 kb on - strand, within IAI47_00790 at 167.873 kb on - strand, within IAI47_00790 at 167.881 kb on + strand, within IAI47_00790 at 167.882 kb on - strand, within IAI47_00790 at 167.990 kb on + strand, within IAI47_00790 at 167.990 kb on + strand, within IAI47_00790 at 167.990 kb on + strand, within IAI47_00790 at 167.990 kb on + strand, within IAI47_00790 at 167.990 kb on + strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 167.991 kb on - strand, within IAI47_00790 at 168.043 kb on - strand, within IAI47_00790 at 168.043 kb on - strand, within IAI47_00790 at 168.120 kb on + strand at 168.134 kb on + strand at 168.134 kb on + strand at 168.159 kb on + strand at 168.160 kb on - strand at 168.160 kb on - strand at 168.166 kb on + strand at 168.955 kb on - strand at 168.955 kb on - strand at 168.955 kb on - strand at 168.955 kb on - strand at 169.000 kb on - strand at 169.000 kb on - strand at 169.000 kb on - strand at 169.000 kb on - strand at 169.001 kb on + strand at 169.001 kb on + strand at 169.001 kb on + strand at 169.002 kb on - strand at 169.002 kb on - strand at 169.002 kb on - strand at 169.014 kb on + strand at 169.159 kb on + strand, within IAI47_00800 at 169.160 kb on - strand, within IAI47_00800 at 169.160 kb on - strand, within IAI47_00800 at 169.185 kb on + strand, within IAI47_00800 at 169.185 kb on + strand, within IAI47_00800 at 169.185 kb on + strand, within IAI47_00800 at 169.186 kb on - strand, within IAI47_00800 at 169.186 kb on - strand, within IAI47_00800 at 169.221 kb on + strand, within IAI47_00800 at 169.230 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.258 kb on + strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.259 kb on - strand, within IAI47_00800 at 169.362 kb on - strand, within IAI47_00800 at 169.369 kb on + strand, within IAI47_00800 at 169.369 kb on + strand, within IAI47_00800 at 169.370 kb on - strand, within IAI47_00800 at 169.370 kb on - strand, within IAI47_00800 at 169.370 kb on - strand, within IAI47_00800 at 169.370 kb on - strand, within IAI47_00800 at 169.427 kb on + strand, within IAI47_00800 at 169.427 kb on + strand, within IAI47_00800 at 169.428 kb on - strand, within IAI47_00800 at 169.475 kb on + strand, within IAI47_00800 at 169.475 kb on + strand, within IAI47_00800 at 169.475 kb on + strand, within IAI47_00800 at 169.477 kb on + strand, within IAI47_00800 at 169.477 kb on + strand, within IAI47_00800 at 169.478 kb on - strand, within IAI47_00800 at 169.478 kb on - strand, within IAI47_00800 at 169.505 kb on + strand, within IAI47_00800 at 169.505 kb on + strand, within IAI47_00800 at 169.505 kb on + strand, within IAI47_00800 at 169.505 kb on + strand, within IAI47_00800 at 169.506 kb on - strand, within IAI47_00800 at 169.506 kb on - strand, within IAI47_00800 at 169.506 kb on - strand, within IAI47_00800 at 169.506 kb on - strand, within IAI47_00800 at 169.534 kb on + strand, within IAI47_00800 at 169.535 kb on - strand, within IAI47_00800 at 169.615 kb on - strand at 169.679 kb on + strand at 169.736 kb on + strand at 169.736 kb on + strand at 169.736 kb on + strand at 169.737 kb on - strand at 169.737 kb on - strand at 169.737 kb on - strand at 169.737 kb on - strand at 169.737 kb on - strand at 169.749 kb on + strand at 169.749 kb on + strand at 169.750 kb on - strand at 169.750 kb on - strand at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.839 kb on + strand, within IAI47_00805 at 169.840 kb on - strand, within IAI47_00805 at 169.840 kb on - strand, within IAI47_00805 at 169.840 kb on - strand, within IAI47_00805 at 169.840 kb on - strand, within IAI47_00805 at 169.840 kb on - strand, within IAI47_00805 at 169.843 kb on + strand, within IAI47_00805 at 169.844 kb on - strand, within IAI47_00805 at 169.844 kb on - strand, within IAI47_00805 at 169.870 kb on + strand, within IAI47_00805 at 169.929 kb on + strand, within IAI47_00805 at 169.929 kb on + strand, within IAI47_00805 at 169.929 kb on + strand, within IAI47_00805 at 169.929 kb on + strand, within IAI47_00805 at 169.930 kb on - strand, within IAI47_00805 at 169.930 kb on - strand, within IAI47_00805 at 169.930 kb on - strand, within IAI47_00805 at 169.930 kb on - strand, within IAI47_00805
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 remove 167,178 + +1.1 167,178 + +0.8 167,178 + +0.6 167,178 + -1.2 167,178 + -0.5 167,178 + +0.1 167,179 - -2.8 167,179 - -1.2 167,179 - -0.1 167,179 - -0.5 167,179 - +0.2 167,179 - -0.7 167,179 - -0.9 167,179 - +0.1 167,179 - -0.6 167,179 - -0.9 167,179 - -0.7 167,199 + -0.3 167,199 + -0.1 167,200 - +0.5 167,200 - -2.7 167,202 + -0.1 167,202 + +0.4 167,202 + -1.1 167,202 + +0.5 167,202 + +0.2 167,202 + +0.1 167,202 + +0.2 167,202 + -2.0 167,202 + -2.2 167,202 + +0.5 167,203 - -0.2 167,203 - -0.1 167,203 - -0.0 167,203 - -1.6 167,203 - -0.0 167,203 - -0.2 167,203 - -0.2 167,203 - +1.4 167,340 + +0.1 167,340 + -0.2 167,362 + +0.8 167,362 + +0.4 167,362 + -0.4 167,363 - +1.8 167,363 - -1.2 167,363 - -0.6 167,427 + -1.6 167,557 + IAI47_00790 0.25 +0.6 167,558 + IAI47_00790 0.25 -1.4 167,559 - IAI47_00790 0.25 +0.5 167,559 - IAI47_00790 0.25 +0.4 167,559 - IAI47_00790 0.25 -0.3 167,559 - IAI47_00790 0.25 +1.0 167,575 + IAI47_00790 0.27 +0.7 167,575 + IAI47_00790 0.27 +0.7 167,575 + IAI47_00790 0.27 -0.3 167,575 + IAI47_00790 0.27 +1.5 167,575 + IAI47_00790 0.27 +0.4 167,576 - IAI47_00790 0.28 +0.1 167,576 - IAI47_00790 0.28 +0.5 167,576 - +2.5 167,594 + IAI47_00790 0.30 +0.1 167,594 + IAI47_00790 0.30 -1.5 167,595 - IAI47_00790 0.30 -0.7 167,595 - IAI47_00790 0.30 +0.3 167,657 - IAI47_00790 0.38 +0.7 167,657 - IAI47_00790 0.38 +0.5 167,657 - IAI47_00790 0.38 -0.0 167,666 + IAI47_00790 0.39 +0.9 167,666 + IAI47_00790 0.39 -0.7 167,666 + IAI47_00790 0.39 +2.4 167,667 - IAI47_00790 0.39 +0.1 167,762 + IAI47_00790 0.52 -0.4 167,762 + IAI47_00790 0.52 +1.2 167,788 + IAI47_00790 0.55 -1.5 167,788 + IAI47_00790 0.55 +0.4 167,789 - IAI47_00790 0.55 -3.5 167,789 - IAI47_00790 0.55 -1.0 167,789 - IAI47_00790 0.55 +0.5 167,789 - IAI47_00790 0.55 -1.1 167,872 + IAI47_00790 0.66 +0.1 167,873 - IAI47_00790 0.66 -1.6 167,873 - IAI47_00790 0.66 +0.0 167,873 - IAI47_00790 0.66 +0.0 167,873 - IAI47_00790 0.66 +0.2 167,873 - IAI47_00790 0.66 +1.9 167,873 - IAI47_00790 0.66 -0.6 167,881 + IAI47_00790 0.67 -0.2 167,882 - IAI47_00790 0.67 -2.0 167,990 + IAI47_00790 0.81 -0.1 167,990 + IAI47_00790 0.81 -0.8 167,990 + IAI47_00790 0.81 +1.4 167,990 + IAI47_00790 0.81 +0.6 167,990 + IAI47_00790 0.81 -0.2 167,991 - IAI47_00790 0.81 +0.0 167,991 - IAI47_00790 0.81 -0.0 167,991 - IAI47_00790 0.81 +1.4 167,991 - IAI47_00790 0.81 +0.4 167,991 - IAI47_00790 0.81 -0.1 167,991 - IAI47_00790 0.81 -1.6 167,991 - IAI47_00790 0.81 +1.2 167,991 - IAI47_00790 0.81 -0.4 167,991 - IAI47_00790 0.81 -0.0 168,043 - IAI47_00790 0.88 +0.6 168,043 - IAI47_00790 0.88 -0.0 168,120 + -0.0 168,134 + -0.6 168,134 + -0.4 168,159 + -1.1 168,160 - -2.5 168,160 - -0.1 168,166 + +0.4 168,955 - -0.3 168,955 - +1.9 168,955 - +0.9 168,955 - +1.1 169,000 - +0.1 169,000 - -0.1 169,000 - +0.0 169,000 - +0.2 169,001 + -0.0 169,001 + -0.5 169,001 + -3.0 169,002 - -1.3 169,002 - +0.3 169,002 - +0.0 169,014 + +0.1 169,159 + IAI47_00800 0.18 +1.2 169,160 - IAI47_00800 0.18 +0.4 169,160 - IAI47_00800 0.18 -0.2 169,185 + IAI47_00800 0.22 +0.8 169,185 + IAI47_00800 0.22 -0.1 169,185 + IAI47_00800 0.22 -1.7 169,186 - IAI47_00800 0.23 +0.6 169,186 - IAI47_00800 0.23 +0.7 169,221 + IAI47_00800 0.28 -0.7 169,230 + IAI47_00800 0.30 +1.3 169,258 + IAI47_00800 0.35 -0.5 169,258 + IAI47_00800 0.35 +0.4 169,258 + IAI47_00800 0.35 -0.2 169,258 + IAI47_00800 0.35 +0.2 169,258 + IAI47_00800 0.35 -0.0 169,258 + IAI47_00800 0.35 -0.1 169,258 + IAI47_00800 0.35 +0.1 169,258 + IAI47_00800 0.35 +1.6 169,258 + IAI47_00800 0.35 -0.2 169,258 + IAI47_00800 0.35 -0.8 169,258 + IAI47_00800 0.35 -0.1 169,259 - IAI47_00800 0.35 -0.7 169,259 - IAI47_00800 0.35 +2.0 169,259 - IAI47_00800 0.35 -0.2 169,259 - IAI47_00800 0.35 +2.8 169,259 - IAI47_00800 0.35 +0.0 169,259 - IAI47_00800 0.35 +0.5 169,259 - IAI47_00800 0.35 +0.6 169,259 - IAI47_00800 0.35 +0.1 169,362 - IAI47_00800 0.52 +1.0 169,369 + IAI47_00800 0.53 -1.2 169,369 + IAI47_00800 0.53 -0.0 169,370 - IAI47_00800 0.54 +1.6 169,370 - IAI47_00800 0.54 +0.8 169,370 - IAI47_00800 0.54 +0.4 169,370 - IAI47_00800 0.54 +0.8 169,427 + IAI47_00800 0.63 +0.3 169,427 + IAI47_00800 0.63 +0.6 169,428 - IAI47_00800 0.63 +0.4 169,475 + IAI47_00800 0.71 -0.4 169,475 + IAI47_00800 0.71 +0.1 169,475 + IAI47_00800 0.71 -0.3 169,477 + IAI47_00800 0.72 -0.0 169,477 + IAI47_00800 0.72 +0.6 169,478 - IAI47_00800 0.72 +1.5 169,478 - IAI47_00800 0.72 +0.4 169,505 + IAI47_00800 0.76 +2.2 169,505 + IAI47_00800 0.76 -0.3 169,505 + IAI47_00800 0.76 +0.8 169,505 + IAI47_00800 0.76 -0.2 169,506 - IAI47_00800 0.77 +1.2 169,506 - IAI47_00800 0.77 +0.1 169,506 - IAI47_00800 0.77 +0.8 169,506 - IAI47_00800 0.77 -0.2 169,534 + IAI47_00800 0.81 -0.1 169,535 - IAI47_00800 0.82 +0.0 169,615 - +0.8 169,679 + +0.3 169,736 + +0.7 169,736 + +0.3 169,736 + +0.4 169,737 - -0.8 169,737 - -0.0 169,737 - -0.3 169,737 - +0.4 169,737 - -0.3 169,749 + +1.0 169,749 + +0.3 169,750 - +0.1 169,750 - +1.7 169,839 + IAI47_00805 0.22 +0.6 169,839 + IAI47_00805 0.22 -0.1 169,839 + IAI47_00805 0.22 -1.3 169,839 + IAI47_00805 0.22 -0.7 169,839 + IAI47_00805 0.22 +1.5 169,839 + IAI47_00805 0.22 -0.5 169,839 + IAI47_00805 0.22 +0.1 169,839 + IAI47_00805 0.22 -1.6 169,839 + IAI47_00805 0.22 -0.6 169,839 + IAI47_00805 0.22 +1.5 169,839 + IAI47_00805 0.22 -0.1 169,840 - IAI47_00805 0.23 -0.7 169,840 - IAI47_00805 0.23 +0.4 169,840 - IAI47_00805 0.23 +1.1 169,840 - IAI47_00805 0.23 -1.4 169,840 - IAI47_00805 0.23 -0.5 169,843 + IAI47_00805 0.23 +0.7 169,844 - IAI47_00805 0.23 +1.6 169,844 - IAI47_00805 0.23 +0.2 169,870 + IAI47_00805 0.29 -0.6 169,929 + IAI47_00805 0.43 +1.2 169,929 + IAI47_00805 0.43 +0.7 169,929 + IAI47_00805 0.43 -1.5 169,929 + IAI47_00805 0.43 -0.6 169,930 - IAI47_00805 0.43 +0.1 169,930 - IAI47_00805 0.43 -0.4 169,930 - IAI47_00805 0.43 +0.5 169,930 - IAI47_00805 0.43 -0.3
Or see this region's nucleotide sequence