Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23900
Experiment: m.b. Gentamicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Gentamicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,492,495 | - | PGA1_c23880 | 0.75 | +0.6 | |
2,492,495 | - | PGA1_c23880 | 0.75 | +0.3 | |
2,492,529 | - | PGA1_c23880 | 0.79 | -1.3 | |
2,492,539 | + | PGA1_c23880 | 0.81 | -0.2 | |
2,492,618 | - | +0.3 | |||
2,492,618 | - | -1.6 | |||
2,492,618 | - | +0.2 | |||
2,492,625 | + | +0.2 | |||
2,492,646 | + | +0.5 | |||
2,492,654 | - | +0.4 | |||
2,492,667 | - | -0.0 | |||
2,492,681 | + | -0.2 | |||
2,492,689 | - | +1.0 | |||
2,492,693 | + | +1.0 | |||
2,492,702 | - | -2.1 | |||
2,492,720 | - | +0.3 | |||
2,492,737 | + | +0.6 | |||
2,492,737 | + | -0.3 | |||
2,492,765 | - | +1.2 | |||
2,492,765 | - | +0.5 | |||
2,492,765 | - | -1.5 | |||
2,492,905 | - | PGA1_c23890 | 0.12 | -0.7 | |
2,492,905 | - | PGA1_c23890 | 0.12 | -2.6 | |
2,493,272 | + | -0.4 | |||
2,493,277 | + | -0.5 | |||
2,495,314 | - | -2.1 | |||
2,495,638 | + | PGA1_c23910 | 0.35 | -0.8 |
Or see this region's nucleotide sequence