Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23810
Experiment: m.b. Gentamicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Gentamicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,484,344 | - | PGA1_c23800 | 0.64 | +0.5 | |
2,484,549 | + | PGA1_c23800 | 0.73 | +1.7 | |
2,484,635 | + | PGA1_c23800 | 0.76 | +0.7 | |
2,484,643 | - | PGA1_c23800 | 0.77 | +1.3 | |
2,484,919 | + | PGA1_c23800 | 0.89 | +0.5 | |
2,484,999 | + | +0.9 | |||
2,485,007 | - | +0.8 | |||
2,485,021 | + | +0.6 | |||
2,485,030 | + | +0.5 | |||
2,485,071 | - | -0.1 | |||
2,485,123 | + | +0.1 | |||
2,485,170 | + | +0.9 | |||
2,485,170 | + | +0.0 | |||
2,485,170 | + | -0.4 | |||
2,485,178 | - | -0.7 | |||
2,485,178 | - | -0.4 | |||
2,485,178 | - | -0.2 | |||
2,485,178 | - | +1.3 | |||
2,485,178 | - | +0.0 | |||
2,485,237 | - | -0.6 | |||
2,485,238 | + | -0.1 | |||
2,485,238 | + | +1.1 | |||
2,485,246 | - | +0.3 | |||
2,485,305 | - | +0.7 | |||
2,485,366 | + | PGA1_c23810 | 0.11 | -0.6 | |
2,485,367 | + | PGA1_c23810 | 0.12 | +0.1 | |
2,485,411 | + | PGA1_c23810 | 0.30 | -0.5 | |
2,485,414 | - | PGA1_c23810 | 0.31 | +0.2 | |
2,485,474 | - | PGA1_c23810 | 0.55 | +1.4 | |
2,485,526 | + | PGA1_c23810 | 0.76 | +0.3 | |
2,485,545 | - | PGA1_c23810 | 0.84 | +0.6 |
Or see this region's nucleotide sequence