Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2651

Experiment: MoLS4 with L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2650 and DVU2651 are separated by 152 nucleotidesDVU2651 and DVU2652 are separated by 192 nucleotides DVU2650: DVU2650 - hypothetical protein (TIGR), at 2,765,697 to 2,766,302 DVU2650 DVU2651: DVU2651 - hypothetical protein (TIGR), at 2,766,455 to 2,766,631 DVU2651 DVU2652: DVU2652 - hypothetical protein (TIGR), at 2,766,824 to 2,767,405 DVU2652 Position (kb) 2766 2767Strain fitness (log2 ratio) -2 -1 0 1at 2765.524 kb on + strandat 2765.532 kb on - strandat 2765.582 kb on - strandat 2765.654 kb on - strandat 2765.654 kb on - strandat 2765.771 kb on + strand, within DVU2650at 2765.926 kb on + strand, within DVU2650at 2765.964 kb on - strand, within DVU2650at 2765.977 kb on + strand, within DVU2650at 2766.015 kb on + strand, within DVU2650at 2766.068 kb on - strand, within DVU2650at 2766.068 kb on - strand, within DVU2650at 2766.437 kb on - strandat 2766.684 kb on + strandat 2766.703 kb on + strandat 2766.918 kb on - strand, within DVU2652at 2767.225 kb on - strand, within DVU2652at 2767.268 kb on + strand, within DVU2652at 2767.373 kb on + strandat 2767.373 kb on + strandat 2767.381 kb on - strandat 2767.438 kb on - strandat 2767.488 kb on + strandat 2767.488 kb on + strandat 2767.496 kb on - strandat 2767.496 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Alanine (N)
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2,765,524 + +0.9
2,765,532 - +0.3
2,765,582 - +0.3
2,765,654 - -1.0
2,765,654 - -0.6
2,765,771 + DVU2650 0.12 +0.7
2,765,926 + DVU2650 0.38 +0.7
2,765,964 - DVU2650 0.44 -1.0
2,765,977 + DVU2650 0.46 -2.2
2,766,015 + DVU2650 0.52 -2.1
2,766,068 - DVU2650 0.61 +0.3
2,766,068 - DVU2650 0.61 -1.0
2,766,437 - -1.8
2,766,684 + +0.7
2,766,703 + -0.5
2,766,918 - DVU2652 0.16 -0.1
2,767,225 - DVU2652 0.69 +0.2
2,767,268 + DVU2652 0.76 +0.1
2,767,373 + -0.4
2,767,373 + +0.3
2,767,381 - -0.4
2,767,438 - +0.8
2,767,488 + -1.5
2,767,488 + +0.3
2,767,496 - -0.5
2,767,496 - -2.0

Or see this region's nucleotide sequence