Strain Fitness in Pantoea sp. MT58 around IAI47_16425

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
3,477,118	+		IAI47_16420	0.14	-1.7
3,477,119	-		IAI47_16420	0.14	-1.5
3,477,157	-		IAI47_16420	0.18	-2.7
3,477,241	-		IAI47_16420	0.26	-2.2
3,477,247	-		IAI47_16420	0.27	-2.6
3,477,247	-		IAI47_16420	0.27	-2.2
3,477,247	-		IAI47_16420	0.27	-1.9
3,477,282	+		IAI47_16420	0.30	-2.2
3,477,282	+		IAI47_16420	0.30	-3.6
3,477,282	+		IAI47_16420	0.30	-1.3
3,477,283	-		IAI47_16420	0.30	-2.9
3,477,283	-		IAI47_16420	0.30	-2.1
3,477,299	+		IAI47_16420	0.32	-1.7
3,477,300	-		IAI47_16420	0.32	-0.5
3,477,317	+		IAI47_16420	0.34	-0.5
3,477,317	+		IAI47_16420	0.34	-0.3
3,477,318	-		IAI47_16420	0.34	-1.9
3,477,318	-		IAI47_16420	0.34	-2.5
3,477,318	-		IAI47_16420	0.34	-0.9
3,477,318	-		IAI47_16420	0.34	-2.0
3,477,411	+		IAI47_16420	0.43	-1.8
3,477,412	-		IAI47_16420	0.43	-1.9
3,477,412	-		IAI47_16420	0.43	-2.6
3,477,412	-		IAI47_16420	0.43	-2.5
3,477,429	+		IAI47_16420	0.45	-2.2
3,477,430	-		IAI47_16420	0.45	-1.1
3,477,457	+		IAI47_16420	0.48	-2.9
3,477,457	+		IAI47_16420	0.48	-1.8
3,477,458	-		IAI47_16420	0.48	-2.6
3,477,458	-		IAI47_16420	0.48	+0.1
3,477,472	+		IAI47_16420	0.49	-2.3
3,477,472	+		IAI47_16420	0.49	-4.1
3,477,513	+		IAI47_16420	0.53	-2.0
3,477,513	+		IAI47_16420	0.53	-3.4
3,477,579	-		IAI47_16420	0.59	-0.0
3,477,584	+		IAI47_16420	0.60	-3.9
3,477,584	+		IAI47_16420	0.60	-4.1
3,477,584	+		IAI47_16420	0.60	-1.6
3,477,584	+		IAI47_16420	0.60	-1.3
3,477,584	+		IAI47_16420	0.60	-1.3
3,477,584	+		IAI47_16420	0.60	-3.3
3,477,584	+		IAI47_16420	0.60	-2.5
3,477,584	+		IAI47_16420	0.60	-2.7
3,477,585	-		IAI47_16420	0.60	-0.7
3,477,585	-		IAI47_16420	0.60	-1.8
3,477,585	-		IAI47_16420	0.60	-2.2
3,477,585	-		IAI47_16420	0.60	-3.0
3,477,585	-		IAI47_16420	0.60	-1.8
3,477,585	-		IAI47_16420	0.60	-1.6
3,477,585	-		IAI47_16420	0.60	-2.4
3,477,585	-		IAI47_16420	0.60	-1.3
3,477,608	+		IAI47_16420	0.62	-1.6
3,477,608	+		IAI47_16420	0.62	-2.4
3,477,608	+		IAI47_16420	0.62	-3.1
3,477,608	+		IAI47_16420	0.62	-2.3
3,477,633	+		IAI47_16420	0.65	-2.8
3,477,696	+		IAI47_16420	0.71	-2.0
3,477,696	+		IAI47_16420	0.71	-1.7
3,477,696	+		IAI47_16420	0.71	-2.2
3,477,697	-		IAI47_16420	0.71	-1.5
3,477,697	-		IAI47_16420	0.71	-3.1
3,477,697	-		IAI47_16420	0.71	-2.0
3,477,697	-		IAI47_16420	0.71	+0.5
3,477,765	+		IAI47_16420	0.78	-0.9
3,477,766	-		IAI47_16420	0.78	-2.1
3,477,768	+		IAI47_16420	0.78	-3.5
3,477,768	+		IAI47_16420	0.78	-2.0
3,477,768	+		IAI47_16420	0.78	-3.2
3,477,769	-		IAI47_16420	0.78	-1.1
3,477,769	-		IAI47_16420	0.78	-0.7
3,477,769	-		IAI47_16420	0.78	-2.0
3,477,769	-		IAI47_16420	0.78	-2.1
3,477,795	+		IAI47_16420	0.81	-1.3
3,477,795	+		IAI47_16420	0.81	-2.9
3,477,795	+		IAI47_16420	0.81	-1.2
3,477,795	+		IAI47_16420	0.81	-1.6
3,477,795	+		IAI47_16420	0.81	-1.4
3,477,795	+		IAI47_16420	0.81	-1.5
3,477,795	+		IAI47_16420	0.81	-3.9
3,477,795	+		IAI47_16420	0.81	-3.0
3,477,795	+		IAI47_16420	0.81	-0.9
3,477,795	+		IAI47_16420	0.81	-2.4
3,477,796	-		IAI47_16420	0.81	-0.8
3,477,796	-		IAI47_16420	0.81	-0.0
3,477,798	+		IAI47_16420	0.81	-3.0
3,477,849	+		IAI47_16420	0.86	-3.1
3,477,850	-		IAI47_16420	0.86	-2.0
3,477,863	-		IAI47_16420	0.87	-1.9
3,477,906	+				-3.5
3,477,906	+				-1.9
3,477,906	+				-2.9
3,477,914	+				-1.5
3,477,914	+				-2.7
3,477,914	+				-3.7
3,477,914	+				-1.2
3,477,914	+				-3.0
3,477,914	+				-3.5
3,477,914	+				-2.6
3,477,914	+				-2.0
3,477,914	+				-1.5
3,477,914	+				+0.0
3,477,914	+				-2.2
3,477,915	-				-4.3
3,477,915	-				-3.4
3,477,915	-				-0.3
3,477,915	-				-3.3
3,477,915	-				-1.8
3,477,915	-				-0.5
3,477,915	-				-2.9
3,477,915	-				-2.3
3,477,915	-				-2.2
3,477,915	-				-0.9
3,477,987	+				-3.7
3,477,987	+				-1.0
3,477,988	-				-2.0
3,477,988	-				-2.2
3,477,988	-				-0.8
3,477,988	-				-1.7
3,477,988	-				-2.6
3,478,024	+				+0.3
3,478,025	-				-0.2
3,478,073	+				-1.5
3,478,073	+				-2.5
3,478,074	-				+0.2
3,478,079	+				-2.5
3,478,079	+				-2.8
3,478,079	+				-0.8
3,478,079	+				-1.9
3,478,079	+				-2.6
3,478,079	+				-1.6
3,478,079	+				-0.9
3,478,079	+				-1.2
3,478,080	-				+0.9
3,478,080	-				+0.7
3,478,080	-				+0.3
3,478,080	-				+1.3
3,478,137	+				-2.3
3,478,137	+				-2.8
3,478,137	+				-2.7
3,478,137	+				-2.5
3,478,138	-				+1.4
3,478,140	+				-1.4
3,478,140	+				-2.2
3,478,140	+				-3.0
3,478,140	+				-2.7
3,478,141	-				-0.0
3,478,141	-				+0.1
3,478,141	-				+0.2
3,478,141	-				+0.4
3,478,172	+				-1.2
3,478,172	+				-1.8
3,478,173	-				+0.7
3,478,200	+				-0.8
3,478,201	-				+0.6
3,478,201	-				+0.8
3,478,201	-				-0.2
3,478,201	-				+0.3
3,478,202	+				-1.1
3,478,202	+				-2.2
3,478,202	+				-1.9
3,478,202	+				-1.0
3,478,203	-				+0.9
3,478,203	-				+0.3
3,478,203	-				+0.8
3,478,203	-				+1.4
3,478,203	-				+0.7
3,478,212	+				+0.3
3,478,213	-				+1.5
3,478,213	-				+0.5
3,478,213	-				+2.2
3,478,213	-				+0.1
3,478,213	-				+1.0
3,478,213	-				+1.1
3,478,284	+		IAI47_16425	0.15	+0.5
3,478,285	-		IAI47_16425	0.15	-0.2
3,478,285	-		IAI47_16425	0.15	+1.1
3,478,286	+		IAI47_16425	0.15	+0.6
3,478,287	-		IAI47_16425	0.15	+1.0
3,478,287	-		IAI47_16425	0.15	+1.0
3,478,363	-		IAI47_16425	0.21	-0.8
3,478,405	-		IAI47_16425	0.24	+1.0
3,478,416	+		IAI47_16425	0.24	-2.0
3,478,416	+		IAI47_16425	0.24	+0.4
3,478,416	+		IAI47_16425	0.24	+1.1
3,478,417	-		IAI47_16425	0.24	+1.3
3,478,417	-		IAI47_16425	0.24	+1.1
3,478,417	-		IAI47_16425	0.24	+0.4
3,478,433	+		IAI47_16425	0.26	-0.1
3,478,434	-		IAI47_16425	0.26	-1.0
3,478,434	-		IAI47_16425	0.26	+0.1
3,478,434	-		IAI47_16425	0.26	+0.6
3,478,464	-		IAI47_16425	0.28	+0.3
3,478,464	-		IAI47_16425	0.28	+1.5
3,478,505	-		IAI47_16425	0.31	-0.7
3,478,558	+		IAI47_16425	0.35	+0.5
3,478,559	-		IAI47_16425	0.35	+2.5
3,478,566	+		IAI47_16425	0.35	-0.8
3,478,566	+		IAI47_16425	0.35	-0.6
3,478,567	-		IAI47_16425	0.35	+0.9
3,478,567	-		IAI47_16425	0.35	+1.2
3,478,567	-		IAI47_16425	0.35	+1.1
3,478,567	-		IAI47_16425	0.35	+0.5
3,478,567	-		IAI47_16425	0.35	-0.3
3,478,567	-		IAI47_16425	0.35	+0.5
3,478,592	+		IAI47_16425	0.37	+0.2
3,478,592	+		IAI47_16425	0.37	+0.4
3,478,593	-		IAI47_16425	0.37	+0.2
3,478,619	+		IAI47_16425	0.39	-0.9
3,478,619	+		IAI47_16425	0.39	-1.0
3,478,619	+		IAI47_16425	0.39	+0.0
3,478,620	-		IAI47_16425	0.39	-0.0
3,478,620	-		IAI47_16425	0.39	-0.6
3,478,620	-		IAI47_16425	0.39	+0.2
3,478,917	+		IAI47_16425	0.60	-0.0
3,478,973	+		IAI47_16425	0.64	-0.2
3,478,973	+		IAI47_16425	0.64	-0.4
3,478,974	-		IAI47_16425	0.65	+0.7
3,478,974	-		IAI47_16425	0.65	+0.2
3,479,031	+		IAI47_16425	0.69	-0.0
3,479,031	+		IAI47_16425	0.69	+0.2
3,479,031	+		IAI47_16425	0.69	-0.7
3,479,031	+		IAI47_16425	0.69	-0.6
3,479,032	-		IAI47_16425	0.69	+1.5
3,479,032	-		IAI47_16425	0.69	+0.3
3,479,032	-		IAI47_16425	0.69	+0.9
3,479,066	-		IAI47_16425	0.71	-0.5
3,479,073	+		IAI47_16425	0.72	-2.7
3,479,073	+		IAI47_16425	0.72	-0.9
3,479,073	+		IAI47_16425	0.72	+1.0
3,479,074	-		IAI47_16425	0.72	+0.7
3,479,081	+		IAI47_16425	0.72	-0.7
3,479,127	+		IAI47_16425	0.76	+0.2
3,479,127	+		IAI47_16425	0.76	-0.2
3,479,127	+		IAI47_16425	0.76	+0.2
3,479,127	+		IAI47_16425	0.76	+1.4
3,479,128	-		IAI47_16425	0.76	-1.1
3,479,128	-		IAI47_16425	0.76	+1.3
3,479,128	-		IAI47_16425	0.76	+1.2
3,479,128	-		IAI47_16425	0.76	+1.4
3,479,309	+		IAI47_16425	0.89	+0.7
3,479,309	+		IAI47_16425	0.89	-0.5
3,479,310	-		IAI47_16425	0.89	+0.4
3,479,328	-				+1.0
3,479,466	+				-0.6
3,479,466	+				-0.7
3,479,466	+				+0.1
3,479,466	+				-0.3
3,479,466	+				+0.4
3,479,467	-				+1.0
3,479,467	-				-0.0
3,479,467	-				-0.2
3,479,467	-				-0.3
3,479,467	-				+0.5
3,479,472	+				-1.0
3,479,473	-				+0.2
3,479,473	-				-0.7
3,479,473	-				+0.1
3,479,486	+				-0.8
3,479,486	+				-0.2
3,479,486	+				-0.8
3,479,487	-				+0.3
3,479,487	-				+0.1
3,479,487	-				+0.2
3,479,487	-				-0.5
3,479,582	+				-0.3
3,479,608	+				+0.3
3,479,608	+				+1.8
3,479,609	-				+0.4
3,479,633	+				-1.9
3,479,633	+				+0.9
3,479,665	-				-0.4
3,479,666	+				-1.1
3,479,667	-				-0.8
3,479,667	-				+0.0
3,479,671	+				+1.0
3,479,672	-				+0.1
3,479,672	-				-0.3
3,479,688	+				+1.2
3,479,689	-				-0.3
3,479,689	-				-0.4
3,479,689	-				-0.3
3,479,689	-				-0.6
3,479,755	+				+1.1
3,479,756	-				+1.4
3,479,756	-				+0.2
3,479,768	+				-0.4
3,479,769	-				+0.5
3,479,791	+				-0.6
3,479,792	-				-1.0
3,479,834	+				-1.7
3,479,835	-				-0.3
3,479,846	+				-0.1
3,479,875	+				-0.1
3,479,876	-				+0.4
3,479,876	-				+0.6
3,479,892	+				+1.0
3,479,899	+				-0.1
3,479,899	+				-0.5
3,479,900	-				-1.7
3,479,908	+				-0.3
3,479,909	-				-0.2
3,479,943	-				-0.2
3,479,958	+				+0.1
3,479,958	+				-0.9
3,479,958	+				-0.6
3,479,958	+				-2.2
3,479,959	-				+0.2
3,480,000	+				-1.2
3,480,000	+				+1.5
3,480,000	+				+0.0
3,480,001	-				-0.0
3,480,018	+				+0.3
3,480,045	+				-0.9
3,480,045	+				+0.5
3,480,045	+				-0.5
3,480,045	+				+0.9
3,480,045	+				+0.7
3,480,045	+				+2.0
3,480,045	+				-0.9
3,480,045	+				-2.4
3,480,046	-				+0.3
3,480,046	-				+0.3
3,480,046	-				-1.8
3,480,046	-				+0.2
3,480,046	-				+0.1
3,480,046	-				-1.0
3,480,046	-				+0.4
3,480,057	+				-0.8
3,480,076	-				+0.1
3,480,076	-				-0.5
3,480,202	-		IAI47_16430	0.28	-0.7
3,480,207	+		IAI47_16430	0.28	+0.8
3,480,326	+		IAI47_16430	0.50	+0.3
3,480,326	+		IAI47_16430	0.50	+1.4
3,480,326	+		IAI47_16430	0.50	-0.0
3,480,327	-		IAI47_16430	0.50	-0.1
3,480,327	-		IAI47_16430	0.50	-1.1
3,480,333	-		IAI47_16430	0.51	+0.4
3,480,333	-		IAI47_16430	0.51	-0.5