Strain Fitness in Pantoea sp. MT58 around IAI47_12290

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
2,597,480	+		IAI47_12285	0.44	-0.2
2,597,480	+		IAI47_12285	0.44	+0.1
2,597,481	-		IAI47_12285	0.45	+0.8
2,597,481	-		IAI47_12285	0.45	-1.0
2,597,481	-		IAI47_12285	0.45	-0.9
2,597,482	+		IAI47_12285	0.45	+0.5
2,597,483	-		IAI47_12285	0.45	+0.3
2,597,517	+		IAI47_12285	0.48	+0.5
2,597,517	+		IAI47_12285	0.48	+0.1
2,597,518	-		IAI47_12285	0.48	-0.5
2,597,563	+		IAI47_12285	0.52	-1.2
2,597,564	-		IAI47_12285	0.52	+0.7
2,597,564	-		IAI47_12285	0.52	-0.1
2,597,564	-		IAI47_12285	0.52	-1.5
2,597,564	-		IAI47_12285	0.52	+1.6
2,597,566	-		IAI47_12285	0.52	-0.5
2,597,566	-		IAI47_12285	0.52	+0.7
2,597,595	+		IAI47_12285	0.55	+1.7
2,597,595	+		IAI47_12285	0.55	-1.1
2,597,596	-		IAI47_12285	0.55	+1.0
2,597,596	-		IAI47_12285	0.55	+1.0
2,597,611	+		IAI47_12285	0.56	-1.6
2,597,627	+		IAI47_12285	0.57	+0.1
2,597,628	-		IAI47_12285	0.57	-0.6
2,597,699	-		IAI47_12285	0.64	-1.5
2,597,699	-		IAI47_12285	0.64	-2.1
2,597,699	-		IAI47_12285	0.64	+1.1
2,597,699	-		IAI47_12285	0.64	+1.9
2,597,699	-		IAI47_12285	0.64	+0.1
2,597,741	+		IAI47_12285	0.67	-0.3
2,597,741	+		IAI47_12285	0.67	+0.0
2,597,742	-		IAI47_12285	0.68	-1.7
2,597,742	-		IAI47_12285	0.68	-0.2
2,597,781	+		IAI47_12285	0.71	+0.8
2,597,781	+		IAI47_12285	0.71	+0.5
2,597,782	-		IAI47_12285	0.71	+0.9
2,597,782	-		IAI47_12285	0.71	+0.5
2,597,782	-		IAI47_12285	0.71	-0.6
2,597,783	+		IAI47_12285	0.71	+0.6
2,597,783	+		IAI47_12285	0.71	-0.6
2,597,783	+		IAI47_12285	0.71	-0.2
2,597,783	+		IAI47_12285	0.71	+0.5
2,597,783	+		IAI47_12285	0.71	-1.3
2,597,783	+		IAI47_12285	0.71	+0.3
2,597,784	-		IAI47_12285	0.71	+0.7
2,597,784	-		IAI47_12285	0.71	-0.2
2,597,784	-		IAI47_12285	0.71	+0.0
2,597,784	-		IAI47_12285	0.71	+0.1
2,597,800	+		IAI47_12285	0.73	+0.5
2,597,854	+		IAI47_12285	0.77	-0.8
2,597,854	+		IAI47_12285	0.77	-0.6
2,597,854	+		IAI47_12285	0.77	-1.1
2,597,854	+		IAI47_12285	0.77	-1.4
2,597,854	+		IAI47_12285	0.77	+0.1
2,597,855	-		IAI47_12285	0.78	-1.5
2,597,855	-		IAI47_12285	0.78	+0.8
2,597,855	-		IAI47_12285	0.78	-1.0
2,597,855	-		IAI47_12285	0.78	-1.5
2,597,855	-		IAI47_12285	0.78	-1.1
2,597,888	+		IAI47_12285	0.80	+0.6
2,597,888	+		IAI47_12285	0.80	-1.5
2,597,888	+		IAI47_12285	0.80	+0.3
2,597,888	+		IAI47_12285	0.80	-1.3
2,597,888	+		IAI47_12285	0.80	+0.2
2,597,888	+		IAI47_12285	0.80	-1.2
2,597,888	+		IAI47_12285	0.80	+0.6
2,597,888	+		IAI47_12285	0.80	+0.5
2,597,889	-		IAI47_12285	0.81	-1.1
2,597,889	-		IAI47_12285	0.81	+1.5
2,597,889	-		IAI47_12285	0.81	-0.1
2,597,889	-		IAI47_12285	0.81	+0.8
2,597,911	+		IAI47_12285	0.82	+1.4
2,597,911	+		IAI47_12285	0.82	+0.4
2,597,911	+		IAI47_12285	0.82	-1.5
2,597,911	+		IAI47_12285	0.82	-3.4
2,597,911	+		IAI47_12285	0.82	-0.5
2,597,911	+		IAI47_12285	0.82	-0.7
2,597,912	-		IAI47_12285	0.83	+0.4
2,597,912	-		IAI47_12285	0.83	+0.3
2,597,912	-		IAI47_12285	0.83	-1.3
2,597,912	-		IAI47_12285	0.83	+1.1
2,597,912	-		IAI47_12285	0.83	+1.0
2,597,915	+		IAI47_12285	0.83	+0.3
2,597,915	+		IAI47_12285	0.83	-0.5
2,597,915	+		IAI47_12285	0.83	-0.2
2,597,916	-		IAI47_12285	0.83	-1.7
2,597,916	-		IAI47_12285	0.83	+0.4
2,597,945	+		IAI47_12285	0.85	+1.8
2,597,945	+		IAI47_12285	0.85	-1.5
2,597,945	+		IAI47_12285	0.85	+0.4
2,597,945	+		IAI47_12285	0.85	-1.0
2,597,946	-		IAI47_12285	0.86	-2.2
2,597,950	+		IAI47_12285	0.86	+1.8
2,597,950	+		IAI47_12285	0.86	-1.1
2,597,950	+		IAI47_12285	0.86	-0.4
2,597,950	+		IAI47_12285	0.86	+1.6
2,597,950	+		IAI47_12285	0.86	+0.7
2,597,951	-		IAI47_12285	0.86	-0.6
2,597,951	-		IAI47_12285	0.86	+0.1
2,597,951	-		IAI47_12285	0.86	-0.4
2,597,951	-		IAI47_12285	0.86	+1.6
2,597,951	-		IAI47_12285	0.86	+0.1
2,597,951	-		IAI47_12285	0.86	+0.3
2,597,954	+		IAI47_12285	0.86	-1.8
2,597,954	+		IAI47_12285	0.86	-1.0
2,597,954	+		IAI47_12285	0.86	-1.4
2,597,954	+		IAI47_12285	0.86	-0.3
2,597,955	-		IAI47_12285	0.86	+0.5
2,597,955	-		IAI47_12285	0.86	+0.0
2,597,955	-		IAI47_12285	0.86	-0.9
2,597,955	-		IAI47_12285	0.86	+1.6
2,597,955	-		IAI47_12285	0.86	-0.8
2,597,955	-		IAI47_12285	0.86	+0.3
2,597,955	-		IAI47_12285	0.86	-0.5
2,597,955	-		IAI47_12285	0.86	+0.4
2,597,955	-		IAI47_12285	0.86	+0.3
2,597,955	-		IAI47_12285	0.86	-0.5
2,597,955	-		IAI47_12285	0.86	-0.9
2,598,036	-				-0.1
2,598,036	-				-0.1
2,598,036	-				-0.7
2,598,094	+				+1.5
2,598,095	-				-0.8
2,598,149	+				-0.9
2,598,151	+				-0.5
2,598,151	+				-0.3
2,598,151	+				-0.1
2,598,151	+				-0.4
2,598,151	+				+0.5
2,598,151	+				-0.2
2,598,151	+				-1.2
2,598,151	+				+0.0
2,598,151	+				-0.6
2,598,151	+				+0.2
2,598,152	-				+0.6
2,598,152	-				-2.4
2,598,152	-				+0.3
2,598,152	-				+0.3
2,598,185	-				-0.0
2,598,200	+				-0.3
2,598,200	+				-0.3
2,598,200	+				+0.6
2,598,200	+				+0.7
2,598,200	+				-0.2
2,598,200	+				+0.9
2,598,200	+				+2.2
2,598,201	-				-0.8
2,598,201	-				-0.3
2,598,201	-				-1.6
2,598,201	-				-0.7
2,598,201	-				+0.6
2,598,208	+				-1.1
2,598,208	+				-0.1
2,598,208	+				+0.1
2,598,208	+				-1.0
2,598,208	+				+0.3
2,598,208	+				-0.5
2,598,208	+				-0.1
2,598,208	+				+0.8
2,598,209	-				+0.1
2,598,209	-				-0.1
2,598,209	-				-1.5
2,598,209	-				+0.5
2,598,209	-				-2.3
2,598,218	+				-0.8
2,598,218	+				+0.9
2,598,362	+				+0.2
2,598,364	+				+1.0
2,598,364	+				+0.2
2,598,364	+				+1.6
2,598,364	+				-1.1
2,598,364	+				-0.6
2,598,364	+				-0.1
2,598,365	-				+0.3
2,598,365	-				-0.7
2,598,365	-				-0.1
2,598,365	-				+1.3
2,598,365	-				-1.1
2,598,365	-				+0.0
2,598,365	-				-0.8
2,598,406	+				-1.0
2,598,406	+				+0.8
2,598,444	+				-0.5
2,598,445	-				-0.3
2,598,445	-				-0.3
2,598,445	-				-0.8
2,598,485	+				-0.8
2,598,486	-				+0.4
2,598,486	-				-0.2
2,598,514	+				+0.6
2,598,515	-				-1.1
2,598,527	+				+0.5
2,598,528	-				-0.7
2,598,542	+				-0.3
2,598,543	-				-0.2
2,598,644	+		IAI47_12290	0.16	-0.0
2,598,644	+		IAI47_12290	0.16	+0.2
2,598,674	+		IAI47_12290	0.18	-0.9
2,598,750	+		IAI47_12290	0.24	+0.6
2,598,794	+		IAI47_12290	0.27	+0.3
2,598,794	+		IAI47_12290	0.27	+0.4
2,598,795	-		IAI47_12290	0.27	+0.9
2,598,795	-		IAI47_12290	0.27	-0.7
2,598,802	+		IAI47_12290	0.27	+0.4
2,598,802	+		IAI47_12290	0.27	-0.8
2,598,802	+		IAI47_12290	0.27	+0.8
2,598,803	-		IAI47_12290	0.27	+1.0
2,598,803	-		IAI47_12290	0.27	+0.3
2,598,842	+		IAI47_12290	0.30	+0.2
2,598,842	+		IAI47_12290	0.30	+1.4
2,598,842	+		IAI47_12290	0.30	+0.3
2,598,842	+		IAI47_12290	0.30	+0.7
2,598,842	+		IAI47_12290	0.30	+1.1
2,598,842	+		IAI47_12290	0.30	-1.1
2,598,842	+		IAI47_12290	0.30	-1.2
2,598,843	-		IAI47_12290	0.30	-0.2
2,598,843	-		IAI47_12290	0.30	-2.3
2,598,843	-		IAI47_12290	0.30	-0.3
2,598,843	-		IAI47_12290	0.30	+1.6
2,598,843	-		IAI47_12290	0.30	+0.5
2,598,843	-		IAI47_12290	0.30	+0.8
2,598,843	-		IAI47_12290	0.30	+1.4
2,598,843	-		IAI47_12290	0.30	-1.3
2,598,843	-		IAI47_12290	0.30	+0.1
2,598,848	-		IAI47_12290	0.30	-0.9
2,598,848	-		IAI47_12290	0.30	+2.1
2,598,910	-		IAI47_12290	0.35	-1.5
2,598,967	+		IAI47_12290	0.38	+0.0
2,598,967	+		IAI47_12290	0.38	+0.6
2,598,968	-		IAI47_12290	0.39	+0.3
2,599,052	+		IAI47_12290	0.44	-0.0
2,599,134	+		IAI47_12290	0.50	-1.5
2,599,134	+		IAI47_12290	0.50	-0.3
2,599,134	+		IAI47_12290	0.50	+0.2
2,599,134	+		IAI47_12290	0.50	-0.7
2,599,135	-		IAI47_12290	0.50	+1.6
2,599,165	+		IAI47_12290	0.52	-1.0
2,599,165	+		IAI47_12290	0.52	+0.0
2,599,165	+		IAI47_12290	0.52	-0.3
2,599,165	+		IAI47_12290	0.52	-1.1
2,599,165	+		IAI47_12290	0.52	-1.0
2,599,166	-		IAI47_12290	0.52	+0.4
2,599,268	+		IAI47_12290	0.59	-1.0
2,599,268	+		IAI47_12290	0.59	-0.6
2,599,279	+		IAI47_12290	0.60	+0.9
2,599,280	-		IAI47_12290	0.60	+0.0
2,599,320	+		IAI47_12290	0.63	-0.7
2,599,373	-		IAI47_12290	0.66	-0.4
2,599,388	+		IAI47_12290	0.67	-0.7
2,599,389	-		IAI47_12290	0.67	+0.1
2,599,474	+		IAI47_12290	0.73	+0.9
2,599,475	-		IAI47_12290	0.73	+0.5
2,599,494	-		IAI47_12290	0.75	-0.9
2,599,511	+		IAI47_12290	0.76	+0.9
2,599,511	+		IAI47_12290	0.76	-0.4
2,599,559	+		IAI47_12290	0.79	-0.6
2,599,560	-		IAI47_12290	0.79	+0.2
2,599,560	-		IAI47_12290	0.79	+0.6
2,599,577	+		IAI47_12290	0.80	-0.2
2,599,578	-		IAI47_12290	0.80	-2.3
2,599,578	-		IAI47_12290	0.80	+1.9
2,599,578	-		IAI47_12290	0.80	-0.1
2,599,578	-		IAI47_12290	0.80	-0.3
2,599,678	+		IAI47_12290	0.87	+0.6
2,599,678	+		IAI47_12290	0.87	+0.3
2,599,678	+		IAI47_12290	0.87	-0.4
2,599,678	+		IAI47_12290	0.87	-1.4
2,599,678	+		IAI47_12290	0.87	-1.3
2,599,678	+		IAI47_12290	0.87	+0.9
2,599,678	+		IAI47_12290	0.87	+0.3
2,599,678	+		IAI47_12290	0.87	+0.7
2,599,678	+		IAI47_12290	0.87	-0.3
2,599,678	+		IAI47_12290	0.87	-0.8
2,599,679	-		IAI47_12290	0.87	+0.2
2,599,679	-		IAI47_12290	0.87	+0.0
2,599,679	-		IAI47_12290	0.87	+1.8
2,599,681	+		IAI47_12290	0.87	+0.8
2,599,682	-		IAI47_12290	0.87	-0.8
2,599,688	+		IAI47_12290	0.88	+0.7
2,599,714	-		IAI47_12290	0.90	+0.8
2,599,714	-		IAI47_12290	0.90	-1.0
2,599,755	+				-0.9
2,599,755	+				-0.5
2,599,755	+				+0.2
2,599,755	+				+0.3
2,599,756	-				-0.2
2,599,889	+				+1.0
2,599,889	+				+0.7
2,599,895	+				-1.7
2,599,896	-				-1.3
2,599,896	-				-0.5
2,599,896	-				+1.1
2,599,898	+				-0.3
2,599,925	+				-0.4
2,599,925	+				+1.1
2,599,926	-				+1.6
2,599,964	+				-1.7
2,599,964	+				-1.9
2,599,965	-				+0.8
2,599,969	+				-0.5
2,599,975	+				-0.5
2,600,019	+				-0.6
2,600,019	+				-1.3
2,600,019	+				-1.0
2,600,019	+				+0.3
2,600,019	+				+1.9
2,600,019	+				-0.9
2,600,019	+				-0.6
2,600,020	-				-1.3
2,600,020	-				+1.2
2,600,020	-				-1.1
2,600,020	-				-0.4
2,600,020	-				+1.2
2,600,020	-				-0.1
2,600,020	-				-0.5
2,600,020	-				+0.8
2,600,020	-				+0.1
2,600,020	-				-0.3
2,600,020	-				-0.4
2,600,038	-				-0.8
2,600,043	+				+0.4
2,600,056	+				+1.2
2,600,106	+				-0.4
2,600,140	-		IAI47_12295	0.10	-0.4
2,600,140	-		IAI47_12295	0.10	+1.1
2,600,163	+		IAI47_12295	0.12	+0.9
2,600,163	+		IAI47_12295	0.12	+2.3
2,600,164	-		IAI47_12295	0.12	-0.1
2,600,164	-		IAI47_12295	0.12	-0.4
2,600,164	-		IAI47_12295	0.12	+0.0
2,600,164	-		IAI47_12295	0.12	+0.4
2,600,183	-		IAI47_12295	0.14	+2.0
2,600,211	+		IAI47_12295	0.16	-0.9
2,600,212	-		IAI47_12295	0.17	+0.6
2,600,212	-		IAI47_12295	0.17	+1.6
2,600,263	+		IAI47_12295	0.21	+0.2
2,600,263	+		IAI47_12295	0.21	+0.0
2,600,263	+		IAI47_12295	0.21	+0.1
2,600,263	+		IAI47_12295	0.21	-0.8
2,600,263	+		IAI47_12295	0.21	-0.9
2,600,264	-		IAI47_12295	0.21	-1.2
2,600,291	+		IAI47_12295	0.23	+1.1
2,600,291	+		IAI47_12295	0.23	+0.4
2,600,291	+		IAI47_12295	0.23	-0.6
2,600,291	+		IAI47_12295	0.23	+1.5
2,600,291	+		IAI47_12295	0.23	+1.0
2,600,291	+		IAI47_12295	0.23	+0.8
2,600,291	+		IAI47_12295	0.23	-0.1
2,600,292	-		IAI47_12295	0.23	+0.3
2,600,292	-		IAI47_12295	0.23	-0.8
2,600,361	+		IAI47_12295	0.29	-0.5
2,600,361	+		IAI47_12295	0.29	-0.5
2,600,361	+		IAI47_12295	0.29	+0.4
2,600,362	-		IAI47_12295	0.30	+0.2
2,600,362	-		IAI47_12295	0.30	-0.6
2,600,362	-		IAI47_12295	0.30	-0.9
2,600,362	-		IAI47_12295	0.30	+1.7
2,600,364	+		IAI47_12295	0.30	+0.8
2,600,364	+		IAI47_12295	0.30	+0.8
2,600,364	+		IAI47_12295	0.30	-0.4
2,600,364	+		IAI47_12295	0.30	-0.1
2,600,364	+		IAI47_12295	0.30	+1.0
2,600,395	-		IAI47_12295	0.32	+0.1
2,600,395	-		IAI47_12295	0.32	+3.6
2,600,457	+		IAI47_12295	0.38	-0.5
2,600,465	+		IAI47_12295	0.38	-0.9
2,600,539	-		IAI47_12295	0.45	+0.3
2,600,603	-		IAI47_12295	0.50	-0.3
2,600,640	-		IAI47_12295	0.54	+0.6
2,600,721	+		IAI47_12295	0.61	-0.5
2,600,721	+		IAI47_12295	0.61	+0.2
2,600,721	+		IAI47_12295	0.61	-1.9
2,600,721	+		IAI47_12295	0.61	+0.9
2,600,722	-		IAI47_12295	0.61	+0.2
2,600,722	-		IAI47_12295	0.61	-0.5
2,600,751	-		IAI47_12295	0.63	-1.2
2,600,751	-		IAI47_12295	0.63	+0.2
2,600,776	-		IAI47_12295	0.65	+0.1
2,600,776	-		IAI47_12295	0.65	-0.4
2,600,791	+		IAI47_12295	0.67	-0.3
2,600,791	+		IAI47_12295	0.67	+0.1
2,600,791	+		IAI47_12295	0.67	-0.1
2,600,791	+		IAI47_12295	0.67	-0.2
2,600,791	+		IAI47_12295	0.67	+0.8
2,600,791	+		IAI47_12295	0.67	+0.6
2,600,791	+		IAI47_12295	0.67	+0.5
2,600,792	-		IAI47_12295	0.67	+0.1
2,600,792	-		IAI47_12295	0.67	+0.7
2,600,792	-		IAI47_12295	0.67	-0.4
2,600,792	-		IAI47_12295	0.67	-0.1
2,600,792	-		IAI47_12295	0.67	-0.1