Strain Fitness in Pantoea sp. MT58 around IAI47_00380

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
82,402	+				-0.2
82,402	+				-2.5
82,403	-				-1.4
82,450	+				-1.8
82,450	+				-2.1
82,450	+				-1.5
82,451	-				-3.2
82,451	-				-1.9
82,451	-				-1.1
82,477	+				-0.9
82,477	+				-1.3
82,478	-				-1.6
82,478	-				-3.3
82,527	+		IAI47_00375	0.11	-2.9
82,528	-		IAI47_00375	0.11	-2.4
82,528	-		IAI47_00375	0.11	-2.0
82,541	+		IAI47_00375	0.12	-1.6
82,541	+		IAI47_00375	0.12	-1.1
82,541	+		IAI47_00375	0.12	-1.8
82,541	+		IAI47_00375	0.12	-2.4
82,541	+		IAI47_00375	0.12	-1.3
82,541	+		IAI47_00375	0.12	-2.6
82,541	+		IAI47_00375	0.12	-1.1
82,541	+		IAI47_00375	0.12	-0.1
82,541	+		IAI47_00375	0.12	-0.5
82,541	+		IAI47_00375	0.12	-2.4
82,542	-		IAI47_00375	0.13	-0.3
82,542	-		IAI47_00375	0.13	-2.5
82,542	-		IAI47_00375	0.13	-2.8
82,542	-		IAI47_00375	0.13	-2.7
82,542	-		IAI47_00375	0.13	-1.3
82,542	-		IAI47_00375	0.13	-2.7
82,542	-		IAI47_00375	0.13	-2.4
82,542	-		IAI47_00375	0.13	-3.0
82,597	+		IAI47_00375	0.18	-2.2
82,597	+		IAI47_00375	0.18	-0.7
82,597	+		IAI47_00375	0.18	+0.6
82,597	+		IAI47_00375	0.18	-1.2
82,597	+		IAI47_00375	0.18	-0.8
82,598	-		IAI47_00375	0.18	-2.6
82,598	-		IAI47_00375	0.18	-1.6
82,615	+		IAI47_00375	0.20	-0.2
82,615	+		IAI47_00375	0.20	-2.4
82,615	+		IAI47_00375	0.20	-1.8
82,615	+		IAI47_00375	0.20	-2.2
82,615	+		IAI47_00375	0.20	-1.4
82,615	+		IAI47_00375	0.20	-2.1
82,615	+		IAI47_00375	0.20	-2.7
82,615	+		IAI47_00375	0.20	-2.9
82,615	+		IAI47_00375	0.20	-0.5
82,616	-		IAI47_00375	0.20	-0.5
82,616	-		IAI47_00375	0.20	-2.5
82,616	-		IAI47_00375	0.20	-2.8
82,616	-		IAI47_00375	0.20	-3.0
82,616	-		IAI47_00375	0.20	-2.6
82,616	-		IAI47_00375	0.20	-0.7
82,616	-		IAI47_00375	0.20	-0.8
82,616	-		IAI47_00375	0.20	-0.1
82,616	-		IAI47_00375	0.20	-2.2
82,618	+		IAI47_00375	0.20	-0.6
82,618	+		IAI47_00375	0.20	-0.3
82,618	+		IAI47_00375	0.20	-2.3
82,618	+		IAI47_00375	0.20	-1.8
82,619	-		IAI47_00375	0.20	-3.2
82,628	+		IAI47_00375	0.21	-3.4
82,628	+		IAI47_00375	0.21	-1.9
82,629	-		IAI47_00375	0.21	-1.3
82,664	+		IAI47_00375	0.25	-1.8
82,664	+		IAI47_00375	0.25	-2.8
82,664	+		IAI47_00375	0.25	-1.6
82,664	+		IAI47_00375	0.25	-0.7
82,665	-		IAI47_00375	0.25	-1.2
82,665	-		IAI47_00375	0.25	-2.0
82,665	-		IAI47_00375	0.25	-3.1
82,676	+		IAI47_00375	0.26	-1.6
82,676	+		IAI47_00375	0.26	-1.0
82,676	+		IAI47_00375	0.26	-1.6
82,676	+		IAI47_00375	0.26	-2.2
82,677	-		IAI47_00375	0.26	-1.5
82,677	-		IAI47_00375	0.26	-1.7
82,677	-		IAI47_00375	0.26	-1.3
82,677	-		IAI47_00375	0.26	-2.7
82,678	+		IAI47_00375	0.26	-1.6
82,678	+		IAI47_00375	0.26	-2.4
82,678	+		IAI47_00375	0.26	-1.7
82,678	+		IAI47_00375	0.26	-1.9
82,678	+		IAI47_00375	0.26	-1.4
82,678	+		IAI47_00375	0.26	-3.6
82,678	+		IAI47_00375	0.26	-1.5
82,678	+		IAI47_00375	0.26	+0.1
82,693	+		IAI47_00375	0.28	-0.9
82,694	-		IAI47_00375	0.28	-1.1
82,804	+		IAI47_00375	0.39	-1.5
82,804	+		IAI47_00375	0.39	-2.6
82,804	+		IAI47_00375	0.39	+0.2
82,804	+		IAI47_00375	0.39	-2.0
82,804	+		IAI47_00375	0.39	-1.3
82,805	-		IAI47_00375	0.39	-2.3
82,805	-		IAI47_00375	0.39	-2.3
82,825	+		IAI47_00375	0.41	-1.6
82,825	+		IAI47_00375	0.41	-2.0
82,825	+		IAI47_00375	0.41	-3.7
82,825	+		IAI47_00375	0.41	-1.9
82,825	+		IAI47_00375	0.41	-0.8
82,825	+		IAI47_00375	0.41	-2.2
82,825	+		IAI47_00375	0.41	-1.5
82,825	+		IAI47_00375	0.41	-2.5
82,825	+		IAI47_00375	0.41	-2.2
82,825	+		IAI47_00375	0.41	-2.4
82,826	-		IAI47_00375	0.41	-1.1
82,826	-		IAI47_00375	0.41	-2.7
82,826	-		IAI47_00375	0.41	-0.1
82,826	-		IAI47_00375	0.41	-3.9
82,826	-		IAI47_00375	0.41	-0.7
82,826	-		IAI47_00375	0.41	-3.0
82,826	-		IAI47_00375	0.41	-2.0
82,826	-		IAI47_00375	0.41	-1.0
82,826	-		IAI47_00375	0.41	-0.9
82,826	-		IAI47_00375	0.41	-2.3
82,826	-		IAI47_00375	0.41	-1.1
82,826	-		IAI47_00375	0.41	-1.4
82,826	-		IAI47_00375	0.41	-2.7
82,827	+		IAI47_00375	0.42	-3.9
82,827	+		IAI47_00375	0.42	-1.2
82,827	+		IAI47_00375	0.42	-1.1
82,827	+		IAI47_00375	0.42	-3.1
82,827	+		IAI47_00375	0.42	-1.3
82,827	+		IAI47_00375	0.42	-1.2
82,827	+		IAI47_00375	0.42	-1.0
82,827	+		IAI47_00375	0.42	-1.5
82,828	-		IAI47_00375	0.42	-2.8
82,828	-		IAI47_00375	0.42	-1.5
82,828	-		IAI47_00375	0.42	-3.0
82,828	-		IAI47_00375	0.42	-2.3
82,828	-		IAI47_00375	0.42	-0.7
82,828	-		IAI47_00375	0.42	-1.5
82,828	-		IAI47_00375	0.42	-1.2
82,828	-		IAI47_00375	0.42	-1.5
82,828	-		IAI47_00375	0.42	-1.0
82,828	-		IAI47_00375	0.42	-1.5
82,828	-		IAI47_00375	0.42	-2.0
82,831	+		IAI47_00375	0.42	-1.3
82,831	+		IAI47_00375	0.42	-1.6
82,831	+		IAI47_00375	0.42	-1.0
82,831	+		IAI47_00375	0.42	-1.9
82,831	+		IAI47_00375	0.42	-1.9
82,831	+		IAI47_00375	0.42	-0.8
82,832	-		IAI47_00375	0.42	-2.4
82,832	-		IAI47_00375	0.42	-2.8
82,832	-		IAI47_00375	0.42	-0.8
82,832	-		IAI47_00375	0.42	-2.8
82,832	-		IAI47_00375	0.42	-0.8
82,832	-		IAI47_00375	0.42	-2.1
82,876	+		IAI47_00375	0.47	-2.0
82,876	+		IAI47_00375	0.47	-1.6
82,876	+		IAI47_00375	0.47	-2.3
82,876	+		IAI47_00375	0.47	-0.2
82,877	-		IAI47_00375	0.47	-0.3
82,877	-		IAI47_00375	0.47	-3.5
82,877	-		IAI47_00375	0.47	-2.9
82,912	+		IAI47_00375	0.50	-1.5
82,926	+		IAI47_00375	0.52	+0.4
82,926	+		IAI47_00375	0.52	+1.2
82,926	+		IAI47_00375	0.52	+1.2
82,926	+		IAI47_00375	0.52	-2.3
82,938	-		IAI47_00375	0.53	-2.8
82,938	-		IAI47_00375	0.53	-0.3
82,938	-		IAI47_00375	0.53	-2.0
82,938	-		IAI47_00375	0.53	-2.1
82,939	+		IAI47_00375	0.53	-2.4
82,940	-		IAI47_00375	0.53	-0.9
82,940	-		IAI47_00375	0.53	-3.3
82,940	-		IAI47_00375	0.53	-1.7
82,940	-		IAI47_00375	0.53	-2.1
82,945	+		IAI47_00375	0.54	-3.2
82,945	+		IAI47_00375	0.54	-2.9
82,945	+		IAI47_00375	0.54	-1.2
82,945	+		IAI47_00375	0.54	-0.8
82,945	+		IAI47_00375	0.54	-1.9
82,946	-		IAI47_00375	0.54	-1.2
82,946	-		IAI47_00375	0.54	-2.5
82,947	+		IAI47_00375	0.54	-1.7
82,947	+		IAI47_00375	0.54	-3.3
82,947	+		IAI47_00375	0.54	-1.7
82,947	+		IAI47_00375	0.54	-2.3
82,947	+		IAI47_00375	0.54	-3.0
82,948	-		IAI47_00375	0.54	-1.8
82,948	-		IAI47_00375	0.54	-3.1
82,948	-		IAI47_00375	0.54	-2.2
82,972	+		IAI47_00375	0.56	-1.8
82,972	+		IAI47_00375	0.56	-1.3
82,972	+		IAI47_00375	0.56	-2.1
82,973	-		IAI47_00375	0.56	-3.0
82,973	-		IAI47_00375	0.56	-1.9
82,973	-		IAI47_00375	0.56	-2.9
82,973	-		IAI47_00375	0.56	-2.5
82,987	+		IAI47_00375	0.58	-3.2
82,987	+		IAI47_00375	0.58	-2.5
82,988	-		IAI47_00375	0.58	-2.6
82,988	-		IAI47_00375	0.58	-3.2
83,048	+		IAI47_00375	0.64	-2.1
83,048	+		IAI47_00375	0.64	-2.1
83,048	+		IAI47_00375	0.64	-3.3
83,048	+		IAI47_00375	0.64	-1.8
83,049	-		IAI47_00375	0.64	-1.8
83,049	-		IAI47_00375	0.64	-2.5
83,084	+		IAI47_00375	0.68	-1.8
83,084	+		IAI47_00375	0.68	-2.0
83,084	+		IAI47_00375	0.68	-1.0
83,084	+		IAI47_00375	0.68	-2.0
83,084	+		IAI47_00375	0.68	-0.7
83,084	+		IAI47_00375	0.68	-2.4
83,084	+		IAI47_00375	0.68	-2.6
83,085	-		IAI47_00375	0.68	-1.8
83,085	-		IAI47_00375	0.68	-2.7
83,085	-		IAI47_00375	0.68	-4.1
83,137	+		IAI47_00375	0.73	-1.1
83,137	+		IAI47_00375	0.73	-1.9
83,180	+		IAI47_00375	0.77	-2.0
83,180	+		IAI47_00375	0.77	-2.6
83,180	+		IAI47_00375	0.77	-1.1
83,180	+		IAI47_00375	0.77	-1.3
83,180	+		IAI47_00375	0.77	-1.2
83,181	-		IAI47_00375	0.78	-1.7
83,181	-		IAI47_00375	0.78	-3.7
83,181	-		IAI47_00375	0.78	-1.3
83,181	-		IAI47_00375	0.78	-1.2
83,225	+		IAI47_00375	0.82	-2.5
83,225	+		IAI47_00375	0.82	-0.8
83,226	-		IAI47_00375	0.82	-1.8
83,233	+		IAI47_00375	0.83	-1.9
83,233	+		IAI47_00375	0.83	+0.7
83,234	-		IAI47_00375	0.83	-2.1
83,250	-		IAI47_00375	0.85	-1.0
83,250	-		IAI47_00375	0.85	-2.5
83,269	+		IAI47_00375	0.86	-1.8
83,270	-		IAI47_00375	0.87	-2.4
83,310	+				-2.2
83,311	-				-2.7
83,311	-				-1.3
83,311	-				-0.5
83,311	-				-1.7
83,319	+				-1.7
83,319	+				-1.5
83,319	+				-0.9
83,319	+				-2.0
83,319	+				-2.8
83,319	+				-0.5
83,320	-				-1.2
83,320	-				-1.5
83,320	-				-0.5
83,320	-				-1.4
83,320	-				-2.5
83,436	+				-0.4
83,436	+				-0.9
83,436	+				+0.7
83,436	+				+0.8
83,436	+				-0.3
83,436	+				+0.6
83,436	+				-0.4
83,437	-				+0.8
83,437	-				+0.1
83,437	-				-0.8
83,437	-				-0.6
83,463	+				-0.7
83,463	+				-2.5
83,463	+				+0.4
83,463	+				+0.3
83,463	+				+0.4
83,464	-				-1.4
83,464	-				+0.2
83,464	-				-1.9
83,464	-				-0.5
83,464	-				-0.4
83,482	+				-0.4
83,482	+				+0.1
83,482	+				-1.6
83,499	+				+0.5
83,499	+				+0.4
83,499	+				+0.9
83,499	+				+0.9
83,499	+				-0.9
83,499	+				-0.4
83,500	-				+1.0
83,553	-		IAI47_00380	0.11	-1.4
83,553	-		IAI47_00380	0.11	-0.2
83,599	+		IAI47_00380	0.14	+0.3
83,599	+		IAI47_00380	0.14	+0.5
83,626	-		IAI47_00380	0.16	+0.1
83,626	-		IAI47_00380	0.16	+1.1
83,643	+		IAI47_00380	0.17	+1.5
83,644	-		IAI47_00380	0.18	+0.0
83,644	-		IAI47_00380	0.18	+0.6
83,667	+		IAI47_00380	0.19	-0.5
83,667	+		IAI47_00380	0.19	-0.3
83,668	-		IAI47_00380	0.19	+0.5
83,668	-		IAI47_00380	0.19	+0.2
83,668	-		IAI47_00380	0.19	+0.6
83,694	+		IAI47_00380	0.21	-0.5
83,694	+		IAI47_00380	0.21	-0.3
83,695	-		IAI47_00380	0.21	+0.5
83,695	-		IAI47_00380	0.21	-1.1
83,695	-		IAI47_00380	0.21	+0.3
83,715	+		IAI47_00380	0.23	+1.0
83,715	+		IAI47_00380	0.23	+0.7
83,716	-		IAI47_00380	0.23	-1.9
83,731	+		IAI47_00380	0.24	-0.2
83,731	+		IAI47_00380	0.24	-0.4
83,731	+		IAI47_00380	0.24	-1.8
83,731	+		IAI47_00380	0.24	+0.5
83,732	-		IAI47_00380	0.24	+0.2
83,732	-		IAI47_00380	0.24	+1.3
83,734	+		IAI47_00380	0.24	-2.8
83,734	+		IAI47_00380	0.24	-0.1
83,734	+		IAI47_00380	0.24	-0.6
83,735	-		IAI47_00380	0.24	+0.2
83,735	-		IAI47_00380	0.24	-0.7
83,735	-		IAI47_00380	0.24	-0.1
83,742	+		IAI47_00380	0.25	-0.8
83,742	+		IAI47_00380	0.25	-1.0
83,742	+		IAI47_00380	0.25	+0.7
83,743	-		IAI47_00380	0.25	-2.0
83,790	+		IAI47_00380	0.28	-0.1
83,935	+		IAI47_00380	0.38	+0.2
83,936	-		IAI47_00380	0.38	+0.1
83,936	-		IAI47_00380	0.38	+0.1
83,936	-		IAI47_00380	0.38	+0.4
83,940	+		IAI47_00380	0.39	+0.5
83,940	+		IAI47_00380	0.39	+1.0
83,940	+		IAI47_00380	0.39	-0.2
83,940	+		IAI47_00380	0.39	+1.1
83,941	-		IAI47_00380	0.39	+0.6
83,941	-		IAI47_00380	0.39	+0.3
83,941	-		IAI47_00380	0.39	-0.5
83,941	-		IAI47_00380	0.39	+0.2
83,941	-		IAI47_00380	0.39	+0.4
83,941	-		IAI47_00380	0.39	+0.4
83,941	-		IAI47_00380	0.39	-0.4
84,024	+		IAI47_00380	0.45	-1.0
84,025	-		IAI47_00380	0.45	+0.1
84,025	-		IAI47_00380	0.45	-0.8
84,073	+		IAI47_00380	0.48	-0.8
84,073	+		IAI47_00380	0.48	-0.5
84,073	+		IAI47_00380	0.48	-1.0
84,073	+		IAI47_00380	0.48	+1.5
84,073	+		IAI47_00380	0.48	-1.3
84,073	+		IAI47_00380	0.48	+0.5
84,073	+		IAI47_00380	0.48	-0.6
84,073	+		IAI47_00380	0.48	-0.6
84,073	+		IAI47_00380	0.48	-1.3
84,073	+		IAI47_00380	0.48	+1.2
84,073	+		IAI47_00380	0.48	-0.6
84,073	+		IAI47_00380	0.48	-0.5
84,073	+		IAI47_00380	0.48	-1.4
84,073	+		IAI47_00380	0.48	-0.4
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