Experiment: m.b. Dimethyl Sulfoxide 9 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_976 and HP15_977 are separated by 552 nucleotides HP15_977 and HP15_978 are separated by 205 nucleotides HP15_978 and HP15_979 are separated by 121 nucleotides
HP15_976: HP15_976 - acetyltransferase, GNAT family protein-like protein, at 985,905 to 986,369
_976
HP15_977: HP15_977 - hypothetical protein, at 986,922 to 987,056
_977
HP15_978: HP15_978 - major facilitator superfamily MFS_1, at 987,262 to 988,461
_978
HP15_979: HP15_979 - MOSC domain containing protein, at 988,583 to 989,380
_979
Position (kb) 987
988
989 Strain fitness (log2 ratio) -2
-1
0
1 at 986.337 kb on + strand at 986.410 kb on - strand at 986.494 kb on - strand at 986.594 kb on + strand at 986.602 kb on + strand at 986.602 kb on - strand at 986.701 kb on - strand at 986.706 kb on + strand at 986.714 kb on - strand at 986.895 kb on - strand at 986.938 kb on - strand, within HP15_977 at 987.056 kb on - strand at 987.183 kb on + strand at 987.191 kb on - strand at 987.330 kb on - strand at 987.372 kb on - strand at 987.372 kb on - strand at 987.477 kb on - strand, within HP15_978 at 987.516 kb on - strand, within HP15_978 at 987.539 kb on + strand, within HP15_978 at 987.549 kb on + strand, within HP15_978 at 987.549 kb on + strand, within HP15_978 at 987.556 kb on + strand, within HP15_978 at 987.581 kb on + strand, within HP15_978 at 987.621 kb on - strand, within HP15_978 at 987.656 kb on + strand, within HP15_978 at 987.674 kb on - strand, within HP15_978 at 987.701 kb on - strand, within HP15_978 at 987.724 kb on + strand, within HP15_978 at 987.724 kb on + strand, within HP15_978 at 987.732 kb on - strand, within HP15_978 at 987.942 kb on + strand, within HP15_978 at 987.962 kb on + strand, within HP15_978 at 987.996 kb on + strand, within HP15_978 at 988.115 kb on + strand, within HP15_978 at 988.142 kb on - strand, within HP15_978 at 988.199 kb on + strand, within HP15_978 at 988.204 kb on + strand, within HP15_978 at 988.204 kb on + strand, within HP15_978 at 988.207 kb on - strand, within HP15_978 at 988.267 kb on - strand, within HP15_978 at 988.267 kb on - strand, within HP15_978 at 988.334 kb on + strand, within HP15_978 at 988.352 kb on + strand at 988.399 kb on + strand at 988.399 kb on + strand at 988.435 kb on + strand at 988.454 kb on - strand at 988.454 kb on - strand at 988.565 kb on + strand at 988.677 kb on - strand, within HP15_979 at 988.729 kb on + strand, within HP15_979 at 988.764 kb on - strand, within HP15_979 at 989.000 kb on - strand, within HP15_979 at 989.021 kb on + strand, within HP15_979 at 989.260 kb on + strand, within HP15_979 at 989.303 kb on + strand at 989.389 kb on - strand at 989.399 kb on - strand at 989.415 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 9 vol% remove 986,337 + -0.1 986,410 - -0.0 986,494 - -0.5 986,594 + +1.2 986,602 + +1.1 986,602 - +0.2 986,701 - -0.1 986,706 + -1.0 986,714 - -0.2 986,895 - -0.1 986,938 - HP15_977 0.12 -0.4 987,056 - +0.0 987,183 + -0.3 987,191 - -0.2 987,330 - +0.1 987,372 - +0.2 987,372 - -0.2 987,477 - HP15_978 0.18 +0.2 987,516 - HP15_978 0.21 -0.1 987,539 + HP15_978 0.23 -0.1 987,549 + HP15_978 0.24 +0.3 987,549 + HP15_978 0.24 +0.3 987,556 + HP15_978 0.24 -0.9 987,581 + HP15_978 0.27 +0.2 987,621 - HP15_978 0.30 -0.1 987,656 + HP15_978 0.33 +0.3 987,674 - HP15_978 0.34 +0.3 987,701 - HP15_978 0.37 -0.8 987,724 + HP15_978 0.39 -0.2 987,724 + HP15_978 0.39 -0.8 987,732 - HP15_978 0.39 -0.4 987,942 + HP15_978 0.57 -0.4 987,962 + HP15_978 0.58 -0.4 987,996 + HP15_978 0.61 -0.4 988,115 + HP15_978 0.71 -0.3 988,142 - HP15_978 0.73 -0.4 988,199 + HP15_978 0.78 -0.1 988,204 + HP15_978 0.79 -0.4 988,204 + HP15_978 0.79 +0.5 988,207 - HP15_978 0.79 -0.3 988,267 - HP15_978 0.84 -1.0 988,267 - HP15_978 0.84 +0.3 988,334 + HP15_978 0.89 +0.0 988,352 + -0.5 988,399 + -0.3 988,399 + -1.1 988,435 + -0.0 988,454 - +1.4 988,454 - +0.4 988,565 + -0.1 988,677 - HP15_979 0.12 +0.4 988,729 + HP15_979 0.18 +0.5 988,764 - HP15_979 0.23 -0.9 989,000 - HP15_979 0.52 +0.4 989,021 + HP15_979 0.55 -2.2 989,260 + HP15_979 0.85 +1.0 989,303 + +0.0 989,389 - -0.8 989,399 - -0.3 989,415 + -0.3
Or see this region's nucleotide sequence