Experiment: m.b. Dimethyl Sulfoxide 9 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_807 and HP15_808 are separated by 281 nucleotides HP15_808 and HP15_809 are separated by 59 nucleotides HP15_809 and HP15_810 are separated by 14 nucleotides
HP15_807: HP15_807 - histidine kinase, at 823,798 to 825,783
_807
HP15_808: HP15_808 - flagellar synthesis regulator FleN, at 826,065 to 827,318
_808
HP15_809: HP15_809 - hypothetical protein, at 827,378 to 827,521
_809
HP15_810: HP15_810 - fatty acyl-CoA reductase 1, at 827,536 to 829,071
_810
Position (kb) 826
827
828 Strain fitness (log2 ratio) -1
0
1
2 at 825.152 kb on + strand, within HP15_807 at 825.158 kb on + strand, within HP15_807 at 825.211 kb on + strand, within HP15_807 at 825.216 kb on + strand, within HP15_807 at 825.492 kb on - strand, within HP15_807 at 825.546 kb on - strand, within HP15_807 at 825.580 kb on - strand, within HP15_807 at 825.601 kb on + strand at 825.629 kb on + strand at 825.760 kb on + strand at 825.793 kb on - strand at 826.043 kb on + strand at 826.067 kb on + strand at 826.075 kb on - strand at 826.075 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.277 kb on - strand, within HP15_808 at 826.310 kb on - strand, within HP15_808 at 826.431 kb on + strand, within HP15_808 at 826.439 kb on - strand, within HP15_808 at 826.446 kb on + strand, within HP15_808 at 826.551 kb on - strand, within HP15_808 at 826.594 kb on + strand, within HP15_808 at 826.602 kb on - strand, within HP15_808 at 826.630 kb on + strand, within HP15_808 at 826.712 kb on + strand, within HP15_808 at 826.729 kb on + strand, within HP15_808 at 826.753 kb on + strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.863 kb on - strand, within HP15_808 at 826.944 kb on + strand, within HP15_808 at 826.962 kb on - strand, within HP15_808 at 827.005 kb on - strand, within HP15_808 at 827.015 kb on - strand, within HP15_808 at 827.077 kb on - strand, within HP15_808 at 827.134 kb on - strand, within HP15_808 at 827.206 kb on + strand at 827.219 kb on + strand at 827.298 kb on + strand at 827.537 kb on + strand at 827.545 kb on - strand at 827.550 kb on + strand at 827.586 kb on + strand at 827.594 kb on - strand at 828.042 kb on - strand, within HP15_810 at 828.055 kb on - strand, within HP15_810 at 828.112 kb on + strand, within HP15_810 at 828.120 kb on - strand, within HP15_810 at 828.276 kb on - strand, within HP15_810
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 9 vol% remove 825,152 + HP15_807 0.68 -1.1 825,158 + HP15_807 0.68 -0.2 825,211 + HP15_807 0.71 +1.0 825,216 + HP15_807 0.71 -0.0 825,492 - HP15_807 0.85 +0.5 825,546 - HP15_807 0.88 +0.8 825,580 - HP15_807 0.90 +1.6 825,601 + +0.0 825,629 + -0.1 825,760 + +0.3 825,793 - -0.1 826,043 + -0.1 826,067 + -0.2 826,075 - +0.4 826,075 - +0.1 826,185 - -0.4 826,185 - +0.2 826,277 - HP15_808 0.17 -0.4 826,310 - HP15_808 0.20 -0.2 826,431 + HP15_808 0.29 -0.4 826,439 - HP15_808 0.30 -0.4 826,446 + HP15_808 0.30 -0.0 826,551 - HP15_808 0.39 -0.1 826,594 + HP15_808 0.42 -0.0 826,602 - HP15_808 0.43 -0.1 826,630 + HP15_808 0.45 +0.5 826,712 + HP15_808 0.52 -0.4 826,729 + HP15_808 0.53 +0.1 826,753 + HP15_808 0.55 +0.3 826,812 - HP15_808 0.60 -0.2 826,812 - HP15_808 0.60 +0.9 826,812 - HP15_808 0.60 -1.7 826,863 - HP15_808 0.64 -0.1 826,944 + HP15_808 0.70 -1.6 826,962 - HP15_808 0.72 +0.2 827,005 - HP15_808 0.75 +0.1 827,015 - HP15_808 0.76 +1.1 827,077 - HP15_808 0.81 -0.2 827,134 - HP15_808 0.85 +0.7 827,206 + +0.2 827,219 + +0.5 827,298 + +2.0 827,537 + -0.6 827,545 - +1.5 827,550 + +0.7 827,586 + +0.2 827,594 - -0.7 828,042 - HP15_810 0.33 +0.0 828,055 - HP15_810 0.34 -0.1 828,112 + HP15_810 0.38 +0.2 828,120 - HP15_810 0.38 +0.2 828,276 - HP15_810 0.48 -0.4
Or see this region's nucleotide sequence